Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LCLALPTDSKPISTTEAPILNITQSPSLNISSPSTLEPSEPLKNCTTFLDLLWQRLGENASIKDLMLTLQREEVHGRMTTLPSPRPSSKVEEQQLQRPRNLLPTAVGPPHVKYRLYNRLWEAPKGADVNGKPIQFDDPPLPYTGAYNDDGVLMVNINGKHVRFDSLSYWERIK |
1 | 5kcs1w | 0.11 | 0.10 | 3.55 | 0.81 | SPARKS-K | | EIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEP---------------SKPEQREMLLDALLEISDSDPLLRYYVDSTTMEVISALLQEKYHV-EIEITEPTVIYMERPLKNAEYTIHIVPPNPFWA-SIGLSVSPLPLGSGMQYESVSLGYLNQSFQNAVMEGI |
2 | 2gqbA | 0.17 | 0.10 | 3.22 | 0.47 | FFAS-3D | | -------GDSAAASPGGAQAPATTGAAGTAPTAPQPTAAPSI-DVAPILDKAVKAKGEKTSIVDLMKALARKELAKELGYSGDMNDSASMNISKLVANGGKLPPEI------------------------------------------------------------------- |
3 | 5h3zA6 | 0.09 | 0.05 | 2.01 | 0.37 | HHpred | | ----------------------------------------AIIHWYADALIHFASQSGGSSGPGIYIRRIIADLLGIRFGHNVIHPVVTKELDGVTLQFTCFG---KTVFFTYHVDDT--DKHICVKSNNNILPGDNLNNIYRGGI-----Q-IAK----------------- |
4 | 6d4hA | 0.13 | 0.13 | 4.40 | 0.75 | MUSTER | | LCYKSGELITETGYMDQIIEYLY--PCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQV---DSWEEMLNKAEVGHGYMDRPCLNPADPDCPA-TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQGGTNSTGQTMFQLMTPKQMYEHFKGYEYVS |
5 | 4yodA | 0.14 | 0.03 | 0.98 | 0.39 | CNFpred | | ----------------------------------------PLKTAQEAIRKTIDRTNVDKKVFAYITDLADKYLY-------------------------------------------------------------------------------------------------- |
6 | 2pffB | 0.22 | 0.20 | 6.39 | 0.72 | HHsearch-2 | | FTEAYPNTSLPPSILEDSLENGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQSLGPPQSLYGLNLTLRKAKAPSGL--DQ---SRIPFSERKLKFSNRFLPVA--SPFHSHLLVNKD--LVKNN----VSFNAKDIQIPVYDTFDGSDLRVPVKWETTTQFKKLQKIDIIE |
7 | 3jc8Oa | 0.13 | 0.11 | 3.82 | 0.86 | Neff-PPAS | | --FVKAPPAIKFGGLAFVVGALTAANFFMVIQPTEEEIGW-------------------AVAERRKLDLELADKSEIAQNLNERRREMDVLEQKLSEALTELPEQRDIE----ELLAQINDIGKKSGLELSSVTPGKESVGGGEFFARIPIKMTVSGNYHEIALFLQEMANMR |
8 | 5h3zA6 | 0.10 | 0.08 | 2.97 | 0.51 | HHsearch | | FKLSA-----PDKIPL--------------SAEKLN----AIIHWYADALIHFASQSGGSSGPGIYIRRIIADLLGIRFGHNVIHPVVTKELDGVTLQFTCFG---KTVFFTYHVDDT--DKHICVKSNNNILPGDNLNNIYRGGIQVFLSAASD-NNFHIYVKN-------- |
9 | 6d4hA | 0.13 | 0.13 | 4.39 | 0.57 | SP3 | | LCYKSGELI--TETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQ---VDSWEEMLNKAEVGHGYMDRPCLNPADPDCPA-TAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQGGTNSTG-KLVSAHALQTMFQLMTPKQMYE |
10 | 1jvr | 0.11 | 0.09 | 3.13 | 0.78 | PROSPECTOR2 | | HMGQIHGLSPT-PIPKAPRGLSTHHWLNFLQAAYRLQPGPSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASL------IPKGYPGRVVEIINILVKNQVSPSAPAAPV-------PTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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