Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | ETFVFTKDNLVGNSQGSFTFGPSLSDCPAFKDGILKAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVNKFQITKGGAKTYQARMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQNP |
1 | 1opoC1 | 0.12 | 0.12 | 4.10 | 1.58 | SPARKS-K | | LLSTVKGTTGVIPSFEDWVVSPRNVAVPQLSLLATN-FNKYRITALTVKYSPACSFETNGRVALGFNDDASDTPPTTKHVETAAQTAKDLVIPV---DGKTRFIRDSGRIVLSTYGFDKADTVVGELFIQYTIVLSDP |
2 | 1opoC1 | 0.13 | 0.13 | 4.52 | 1.49 | FFAS-3D | | ELLTVKGTTGVIPSFEDWVVSPRNVAVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTPPTTKVGETAAQTAKDLVIPVDGKTRFIRDSASDDRIVLSTYGFDKADTVVGELFIQYTIVLSDP |
3 | 1opoC1 | 0.13 | 0.12 | 4.30 | 1.93 | HHpred | | TELLSTVKGTTIPSFEDWVVSPRNVVFPQLSL-LATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTPPTTKHVETAAQTAKDLVIPVDG--KTRFIRDSDDFIVLSTYGFDKADTVVGELFIQYTIVLSDP |
4 | 1opoC1 | 0.12 | 0.12 | 4.31 | 1.36 | MUSTER | | ELSTVKGTTGVIPSFEDWVVSPRNVAVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTPPTTKHVETAAQTAKDLVIPVD--GKTRFIRDSDDRIVLSTYGFDKADTVVGELFIQYTIVLSDP |
5 | 2izwA | 0.17 | 0.16 | 5.27 | 1.84 | CNFpred | | SLVRVTSSTAGTEVSGTVLFNVRNTELPWLS-GQGSRYSKYRVRYAHFTWEPIVGSNTNGEVAMAMLYDVADVSITI-GTWGPIWSPTRLSYDPEHA-SLPWYLSG-FQIAWAAQSSLVS-TTLGRIMAEYLVELTDP |
6 | 2zahC1 | 0.14 | 0.13 | 4.49 | 1.34 | HHsearch-2 | | REFIASVLPSNDLNIGKYRVNPSNALFTWLQG-QAQLYDMYRFTRLRFTYIPTTGSTSTGRVSILWDRDSQDPLPIDHYADSAPWAENVLVVPCDN---TWRYMDTVDQFLFATYSGAGA-TAHGDLYVEYAVEFKDP |
7 | 1opoC1 | 0.12 | 0.12 | 4.12 | 1.55 | Neff-PPAS | | LLSTVKGTTGVIPSFEDWVVSPRNVAVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTPPTGKHVETAAQTA--KDLVIPVDGKTRFIRDSASRIVLSTYGFDKADTVVGELFIQYTIVLSDP |
8 | 1opoC1 | 0.12 | 0.12 | 4.10 | 2.09 | HHsearch | | TELLSTVKGTTIPSFEDWVVSPRNVVFPQLSL-LATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTPPTTKHVETAAQTAKDLVIPVDG--KTRFIRDSDDFIVLSTYGFDKADTVVGELFIQYTIVLSD- |
9 | 4nwvA1 | 0.08 | 0.08 | 3.12 | 0.89 | PROSPECTOR2 | | SVVTVVDASTYDAGSAIVSIPITPDIAYRLGS-TARTFQRIKYRSLKFRVNAQCATTTAGGYVAGFVKDAADVLPTGTSFTQPWWKSTVHNVK---IPQKLFYTEAPTQFHVLVDS-KPSQICPVTVDLEWVVELHDA |
10 | 4llfA | 0.18 | 0.15 | 4.97 | 1.08 | SAM | | ---------------NDFSINPLPFLFPWLVN-IAANFDQYKFNSLRFEYVPLVNTTTNGRVALYFDKDSEDPGNYAHLSEISPWAITKLTVPTDN--VKRFITSSGD-GQFGWVAYSGPTAELGDIFVEYTVDLFEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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