Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | QESFVTSGVFNVTELVQVSRTPVVTGTGPNFSLGELQGHLAYDLNPTGTGMRRTLPSTSSSGSKRHKSGSMEDDIDTSPSGEFYTSPSSPASSSRNWQEEMEGGISPTVKKTEMDKSPFSSPSPQDSSPRLSSFTQHHRPVIAVHSGISRSPHPSSSLHFPTTSILPQTASTYFPHTAIRYPPHLGAQDPLKDLVSLACDPSNQQPGPLNGSGQVKVPSHYISSQMLAPPPPPGMSRLTLPPDSKSATTTTEGGANSPTSPTYSAPGTPPANRSFVGIGPRDPGSLYQAQSWYL |
1 | 5fvmC | 0.11 | 0.10 | 3.69 | 1.36 | SPARKS-K | | --VILASAFWEAL---TGVCSRTIQHADSQVNRLEITSDKKYLAAAGHLHVRLYDIRSNNPNPVSSFEGHKGNSIAFQQENRWMVSSSE-DGTIKVWDVR---SPSVQRNYKHNAPVNEVAIHPNQGELISCDQDGNIRDLGENQCTNQLTPEDNTPLQSLSVASDGSMLVAGNNKGNCYVWRMPHHTD-----------ASTLEPVTKFKSHTKYITRVLLSVKNLATCSADHTARVWNIEDNYQLETTLDGHQRWVWDCAFSADSTACSDHYVRLWDLSTSEIVRQYGGHHK |
2 | 2atyA | 0.08 | 0.08 | 3.11 | 1.23 | MUSTER | | YSTPIAVGRYSTFRLIGEKSLLCITKDKVDGPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKESAAFPAPIEKTISKTK--GRPKAPQLYTIPPPKEQMAKDKVSMITDFFPEDITVEWNGQPAENYKNTQPIMNTNESYFVYSKLNV |
3 | 3cnfT | 0.07 | 0.07 | 3.02 | 2.59 | Neff-PPAS | | SHTLRLLGPFQYFNFSETDRGHPLFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNPAILNYSNPQDAFNSVFVALGIDYIDIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHWDVLHTFHYRSESDMIDHFAAKILEDWRQKEKLDKGALVEADRVVQRLIPLSSSTYVQRLAAISRLSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNPYTYIFTTAYTS |
4 | 2nbiA1 | 0.11 | 0.11 | 3.84 | 1.67 | PROSPECTOR2 | | QPSDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGESPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTR--- |
5 | 4nl6A | 0.11 | 0.10 | 3.48 | 1.35 | SPARKS-K | | GGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSED--GCIYPATIASIDFKRETCVVREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSSDNIKPKSAPWNSFLPPPPP-MPGPRLGPG------KPGLKFNGPPPPPPPPPPHLPPFPSGPPIIPPPPPI--CPDSLDDADALGSMLISWYTGYYMGFRQNQKEGRCSHSLN----------------- |
6 | 4nl6A | 0.18 | 0.14 | 4.56 | 0.63 | FFAS-3D | | -----------------------------------------------------AMSSGGSGGGVPEQEDSVTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKV----GDKCSAIWSEDGCIYPATIASIDFKR---ETCVVVYTGYGNREENLSDLLSPSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHPPFPSGPPIIPPPPPICPDSLDDADALSMLISWYM |
7 | 3nvaA | 0.18 | 0.14 | 4.52 | 0.36 | HHpred | | -YIVVTGGVLSSKGTLVASIGMLLKRRGYNVTAVKID--PYINVDAGTMNLERNMTKYNNAGKKDMRYASKINNAEIEIGGT---------------VGDIESLPAVRQLKLEEDNVIFVALVEYLVTGELKKPLQHSQPDFIV----GRATLPDDFTNVKVDHIVSSVETSYIKGNVGKYTKL---KDSYISRPKLIWIESTDINGVLPGFGSHNIPGICFGFQLSI----VEFARDVLLSEA----NSTEINPN-------------------------------------- |
8 | 2nbiA1 | 0.13 | 0.13 | 4.58 | 1.11 | MUSTER | | DECFLYSDASRPPSCLSFGRPDCDVLPTPQCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPPTPQNINCPACCAFECRPNPMFTPSPSPPICSPTMMPSPEPSSQPSDCGEVIEECPPKSDSARPPDGRPDCNVLPFPNNIGCPSCCPFE |
9 | 6ayuA | 0.16 | 0.09 | 2.95 | 0.36 | HHsearch-2 | | -----------HMELVRVTEAGAMAGRGPECHVLDITAPISENIRAVAKVKDLSMTVCIRPRHARIRLIT-DGDVAHSGTDLLAGIGGTPAIQAQLAPRDDAERR--KA--LEA---------------------------------------------------------------GY----DLNQVLTTEDLVSFCAT------GVTDGDLGVRYYGGCTTHSIV-------------M-RSKSGT-----------------------VR-MIEAHRLSKLNE-YSAIDFT |
10 | 2bsgA | 0.07 | 0.06 | 2.74 | 2.52 | Neff-PPAS | | --GILKTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRTIEVGNLREELVYSRLNEIDTKQTTVESDISAIKTSISIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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