Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VMNNYFGIGIDADLCLDFHNAREENPNKFNSRLRNKGVYVKMGLRKMVGRKMCKDLHKAIRLEVDGKLVELPQLEGIIILNILSWGSGANPWGPEKDDQFSKPNHWDGMLEIVGVTGVVHLGQIQSGLRGAMRIAQGGHIKINLKSEIPVQVDGEP |
1 | 3vzdA2 | 0.12 | 0.10 | 3.63 | 1.62 | SPARKS-K | | FSVLSLAWGFIADVDLESEKYRRLGEM----------RFTLGTFLRLAALRTY---RGRLAYLPHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGR--------CAAGVMHLFYVRARAMLLRLFLAMEKGLVYVPVVAFRLEPDGKGVFAVDGEL |
2 | 3vzdA2 | 0.15 | 0.12 | 4.13 | 1.52 | FFAS-3D | | -SVLSLAWGFIADVDLESEKYRR----------LGEMRFTLGTFLRLAALRTYR-----GRLAYHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGR--------CAAGVMHLFYVRALLRLFLAMEKGRPYLVYVPVVAFRLEPDGKGVFAVDGE- |
3 | 3vzdA2 | 0.15 | 0.13 | 4.31 | 1.67 | HHpred | | FSVLSLAWGFIADVDLESEK--Y--------RRLGEMRFTLGTFLRLAALR-----TYRGRLAYLHTVVPDEDFVLVLALLHSHLGSEMFAA--------PMGRCAAGVMHLFYVRAVSRAMLMEKGRHPYLVYVPVVAFRLEPKDKGVFAVDGEL |
4 | 2p1rA2 | 0.21 | 0.16 | 5.10 | 1.44 | MUSTER | | CFIN-ATGGFGTRIT------------------LGGVSYLIHGL--RDTLTPD-----RCEIRGENFHWQG-DALVIGIGNGRQAGGGQQLCPT--------ALINDGLLQLRIFTGEELLPALFSTLNPNIIDGASAWFDIHAPHEITFNLDGEP |
5 | 2bonA | 0.19 | 0.15 | 4.76 | 1.76 | CNFpred | | CFINMATGGFGTRI-------------------LGSVSYIIHGLMRMDTLQ-----PDRCEIRGENFHWQG-DALVIGIGNGRQAGGGQQLC--------PNALINDGLLQLRIFTG-ALVSTLKSDENPNIIEGASSWFDIQAPHDITFNLDGEP |
6 | 3vzdA2 | 0.15 | 0.13 | 4.31 | 2.06 | HHsearch-2 | | FSVLSLAWGFIADVDLESEK--Y--------RRLGEMRFTLGTFLRLAALR-----TYRGRLAYLHTVVPDEDFVLVLALLHSHLGSEMFAA--------PMGRCAAGVMHLFYVRAVSRAMLLEKGRHPYLVYVPVVAFRLEPKDKGVFAVDGEL |
7 | 2p1rA2 | 0.20 | 0.16 | 5.11 | 2.21 | Neff-PPAS | | -CFINATGGFGTRITT-----------------LGGVSYLIHGLRDTLT-------PDRCEIRGENFHWQG-DALVIGIGNGRQAGGGQQLCPT--------ALINDGLLQLRIFTGEELLPALFSTLTPNIIDGASAWFDIHAPHEITFNLDGEP |
8 | 4werA2 | 0.18 | 0.13 | 4.38 | 2.92 | HHsearch | | ---NVVAIGTI-----------K----------LGKLAYFISGAKHLANAQ-----TYPFHLSLDQKEQTI-ESSTVLVGLTNSIGGFETLL--------PEAQVDDGKLHLVYLKDQSLWDALLKGVTDNLVYLTFKEGTILEQEELTTNVDGD- |
9 | 3vzdA2 | 0.14 | 0.12 | 4.14 | 1.24 | PROSPECTOR2 | | FSVLSLAWGFIADVDLESEKYRRL----------GEMRFTLGTFLRLAALR-----TYRGRLAYHWTVVPDEDFVLVLALLHSHLGSEMFAA--------PMGRCAAGVMHLFYVRAGVSRAMLMEYECPYLVYVPVVAFRLEPKDGGVFAVDGEG |
10 | 3vzdA2 | 0.15 | 0.13 | 4.30 | 1.41 | SAM | | FSVLSLAWGFIADVDLESEKYRR----------LGEMRFTLGTFLRLAALR-----TYRGRLAYLSTVVDE-DFVLVLALLHSHLGSEMFAA--------PMGRCAAGVMHLFYVRAVSRAMLLRLGR-PYLVYVPVVAFRLEPKDGGVFAVDGEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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