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BioLiP
>protein
CVTIDADLMDAADLLEGEQVTIVDIDNGARLVTYAITGERGSGVIGINGAAAHLVHPGDLVILIAYATMDDARARTYQPR
IVFVDAYNKPID

The query sequence (length=92) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6p1y:B 102 92 1.0000 0.9020 1.0000 8.89e-62 6oyy:B, 6oyy:D, 6oyy:J, 6oyy:L, 6oyy:F, 6oyy:H, 6oz8:B, 6oz8:D, 6oz8:J, 6oz8:L, 6oz8:F, 6oz8:H, 6p02:B, 6p02:D, 6p02:F, 6p02:H, 6p02:J, 6p02:L, 6p02:N, 6p02:P, 6p02:R, 6p02:T, 6p02:V, 6p02:X
2 1vc3:B 96 92 0.6413 0.6146 0.6413 2.43e-37 2eeo:B
3 3plx:B 101 88 0.4239 0.3861 0.4432 1.28e-24
4 4cry:G 102 86 0.4239 0.3824 0.4535 3.15e-24 7a8y:BBB, 7a8y:EaE, 4aok:B, 4aok:E, 4aon:B, 4aon:E, 1aw8:B, 1aw8:E, 4d7z:B, 5ls7:D, 1pyu:B, 1pyu:D, 6rxh:B, 6rxh:E, 3tm7:B, 3tm7:D
5 1uhe:A 97 91 0.4565 0.4330 0.4615 2.54e-21 1uhd:A
6 2z9v:A 392 57 0.2065 0.0485 0.3333 0.10 2z9v:B, 2z9w:A, 2z9w:B, 2z9x:A, 2z9x:B
7 8xku:A 730 60 0.2065 0.0260 0.3167 0.70 8xkv:A
8 3aoe:F 417 47 0.1848 0.0408 0.3617 1.2 3aoe:E, 3aoe:C, 3aoe:D
9 5nws:A 395 42 0.1522 0.0354 0.3333 1.5
10 6c8q:A 268 64 0.2283 0.0784 0.3281 3.4 6c8q:B, 6c8q:C, 6c8q:G, 6c8q:D, 6c8q:F, 6c8q:E, 6c8q:H
11 6pek:D 293 61 0.1739 0.0546 0.2623 4.4 6pek:A, 6pek:B, 6pek:C, 6pek:E, 6pen:A, 6pen:B, 6pen:C, 6pen:D, 6pen:E, 5z6r:A
12 4gnr:A 348 46 0.1630 0.0431 0.3261 4.5
13 6m4s:A 389 39 0.1413 0.0334 0.3333 4.8
14 8rfv:A 345 53 0.1630 0.0435 0.2830 6.5 9evm:A, 7qxk:A, 7qy4:A, 7qyc:A, 8r8s:A, 8rfl:A, 8rfo:A, 8rfp:A, 8rfq:A, 8rfr:A, 8rfs:A, 8rft:A, 8rfu:A, 8rfw:A, 8rfx:A, 8rfy:A, 8rg8:A, 8rg9:A, 8rgb:A, 8rgc:A, 8rgd:A, 8ru9:A, 8rur:A, 8ryj:A, 8ryr:A, 8ryu:A, 8ryv:A, 8s0w:A, 8s2q:A, 8s5x:A, 8s5y:A, 8s63:A, 8s64:A, 8s68:A, 8s69:A, 6thf:A, 6zar:A, 6zas:A, 6zat:A, 6zau:A, 6zav:A, 6zaw:A, 6zax:A, 7zcn:A, 7zco:A, 7zcp:A, 7zcq:A, 7zcr:A, 7zcs:A
15 8auv:f 141 19 0.1087 0.0709 0.5263 7.9 8b2l:f1, 7qiy:H, 7qiz:RA

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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