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BioLiP
>protein
WAHSRAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRN
LLHD

The query sequence (length=84) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1jm7:B 97 84 1.0000 0.8660 1.0000 2.29e-58 8grq:M, 7jzv:B, 7lyb:N
2 2y43:A 88 84 0.3095 0.2955 0.3095 3.70e-07 2y43:B
3 5olm:B 132 73 0.3095 0.1970 0.3562 1.44e-05 5jpx:A, 5olm:A
4 7bbd:B 160 73 0.3095 0.1625 0.3562 2.92e-05 8a58:C, 8a58:D, 8c07:I, 8f1f:C, 8f1f:c, 6fga:A, 6fga:B, 6fga:C, 6fga:D, 6fga:E, 6fga:F, 6fga:G, 6fga:H, 5m93:B, 5m93:C, 7nbb:C, 5o44:E, 6s53:B, 6s53:A, 6s53:H, 6s53:G, 3zlz:B
5 2ecw:A 85 75 0.2619 0.2588 0.2933 1.79e-04
6 1rmd:A 116 54 0.2381 0.1724 0.3704 5.06e-04
7 7t92:C 317 49 0.1786 0.0473 0.3061 0.005
8 7jzv:A 253 52 0.1905 0.0632 0.3077 0.006 8grq:K, 1jm7:A, 7lyb:M
9 6yxe:A 89 80 0.2619 0.2472 0.2750 0.007 6yxe:B
10 7oik:A 4426 42 0.1786 0.0034 0.3571 0.007 7oim:A, 6tax:A, 6tay:A
11 4tkp:B 63 72 0.2619 0.3492 0.3056 0.008
12 6u75:A 261 69 0.2262 0.0728 0.2754 0.009 6u75:B
13 8fgw:C 1342 76 0.2857 0.0179 0.3158 0.014 8fh3:C
14 2ecj:A 58 42 0.1905 0.2759 0.3810 0.032
15 4orh:H 142 47 0.2143 0.1268 0.3830 0.055 4ayc:A, 4ayc:B, 4orh:C, 4orh:G, 4orh:K, 4orh:L, 4whv:C, 4whv:D, 4whv:I, 4whv:J
16 3knv:A 123 40 0.1786 0.1220 0.3750 0.067
17 4txa:A 367 76 0.2738 0.0627 0.3026 0.067 5f5f:A, 5f5f:G, 5f5f:C, 5f5f:E, 5f5h:A, 5f5h:B, 4qi2:A, 4qi2:B, 4qi2:C, 4qi2:D, 4qik:A, 4qik:B, 4qil:B, 4qil:A, 6tqa:A, 6tqa:B, 6tqa:C, 6tqa:D, 6tqb:A, 4ywq:A, 4zld:A
18 2ecv:A 85 74 0.2143 0.2118 0.2432 0.095
19 6l8n:A 810 53 0.1905 0.0198 0.3019 0.12
20 7l3l:A 141 35 0.1548 0.0922 0.3714 0.22 7l3l:C
21 2ysl:A 73 53 0.2024 0.2329 0.3208 0.25 2ysj:A
22 5dka:A 96 72 0.2143 0.1875 0.2500 0.43 5dka:B, 8gbq:B, 8gcb:B
23 3lrq:D 84 80 0.2381 0.2381 0.2500 0.85 3lrq:A, 3lrq:B, 3lrq:C
24 4r8p:L 254 46 0.1667 0.0551 0.3043 0.93 2ckl:B, 8grm:N, 2h0d:B, 7nd1:A, 8pp7:L, 8pp7:N, 4r8p:N, 3rpg:C, 4s3o:B, 4s3o:E
25 6wi7:A 206 46 0.1667 0.0680 0.3043 0.97 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
26 6wi7:A 206 52 0.1667 0.0680 0.2692 7.8 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
27 5jne:A 351 28 0.1190 0.0285 0.3571 1.2 3i2d:A, 5jne:E
28 5eya:G 86 39 0.1786 0.1744 0.3846 1.8 5eya:F, 5fer:A, 5fer:D
29 4s3o:C 95 66 0.1905 0.1684 0.2424 2.2 4s3o:F
30 6fnd:A 423 41 0.1786 0.0355 0.3659 2.8 6fnd:B, 6fnd:C, 6fnd:D
31 8gui:K 72 46 0.1667 0.1944 0.3043 2.8 8guj:K, 8iej:M, 5trb:A
32 8f5o:C 1179 43 0.1667 0.0119 0.3256 3.4 8f5p:C
33 4r7e:A 69 58 0.1905 0.2319 0.2759 3.4 8ieg:A, 8ieg:B, 8t3t:K, 8t3t:L, 8t3w:K, 8t3w:L, 8t3y:K, 8t3y:L
34 7z36:B 446 62 0.2619 0.0493 0.3548 3.5 6h3a:A, 6h3a:F, 6qaj:A, 6qaj:B, 6qu1:A, 2yvr:A, 2yvr:B, 7z36:A
35 7zj3:A 86 47 0.1905 0.1860 0.3404 4.8 8a38:A, 8a38:B, 8a38:C, 8ams:C, 8ams:D, 7zj3:D, 7zj3:G, 7zj3:J
36 2djb:A 72 35 0.1310 0.1528 0.3143 5.1
37 4oev:A 494 27 0.1190 0.0202 0.3704 5.2 4oeu:A, 4oeu:B, 4oev:B
38 5trq:A 283 17 0.1190 0.0353 0.5882 5.8 8acv:A, 8acv:B, 8aut:A, 8aut:B, 8aut:C, 8aut:D, 6gem:A, 6gem:B, 6gem:C, 6gem:D, 5iqs:A, 5iqs:B, 5iqs:C, 5iqt:A, 5iqt:B, 5iqt:C, 5iqu:A, 5iqv:A, 5iqv:B, 5iqv:C, 5j4r:A, 5t22:A, 5t22:B
39 3vyr:B 371 10 0.0952 0.0216 0.8000 6.2 3vys:B, 3vyt:B, 3vyu:B, 2z1d:A, 2z1d:B
40 3p9t:A 213 22 0.1429 0.0563 0.5455 7.3
41 7bvw:A 79 31 0.1548 0.1646 0.4194 8.0 7bvw:B
42 2rhs:C 271 18 0.1071 0.0332 0.5000 8.3 2rhq:A, 2rhs:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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