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BioLiP
>protein
VVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQKRRRQ

The query sequence (length=68) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6wig:A 84 68 1.0000 0.8095 1.0000 6.04e-46 6wig:B
2 6ryd:A 69 66 0.6765 0.6667 0.6970 1.42e-29 6ryd:B, 6ryd:E, 6ryd:F, 6ryi:A, 6ryi:B, 6ryi:C, 6ryi:D, 6ryi:E, 6ryl:A, 6ryl:B, 6ryl:C, 6ryl:D, 6ryl:E
3 5dtb:A 263 57 0.2647 0.0684 0.3158 0.56 5dtb:B, 5ehm:A, 5ehm:B, 5ehs:A, 5ehs:B
4 8isk:B 848 19 0.1176 0.0094 0.4211 1.6 8isk:A
5 3fai:A 227 32 0.1912 0.0573 0.4062 2.9 3f9o:A, 2gkl:A, 3iof:A, 3iog:A, 2qds:A, 1x8g:A, 1x8h:A, 1x8i:A
6 6ayo:A 229 33 0.1618 0.0480 0.3333 3.0 6ayo:B, 6ayq:A, 6ayq:B, 6ayr:A, 6ayr:B, 6ayr:C, 6ayr:D, 6ays:A, 6ays:B, 6ays:C, 6ays:G, 6ays:D, 6ays:H, 6ays:E, 6ays:F, 6ayt:A, 6ayt:B, 6ayt:C, 6ayt:D
7 4l79:A 734 26 0.1471 0.0136 0.3846 3.2 6c1d:P, 6c1g:P
8 8bal:F 348 21 0.1471 0.0287 0.4762 3.3 8bal:A, 8bal:C, 8bal:D, 8bal:E
9 6j9f:C 1296 37 0.2206 0.0116 0.4054 3.5
10 7p63:C 589 21 0.1618 0.0187 0.5238 3.6 7nyr:D, 7nyu:D, 7nz1:D, 7p64:C, 7p69:C, 7p7c:C, 7p7j:C, 7p7l:C, 7p7m:C, 7z7r:C, 7z7s:C, 7z7t:C, 7z7v:C, 7z80:C, 7z83:C, 7z84:C, 7zc5:C, 7zci:C
11 7p7k:C 568 21 0.1618 0.0194 0.5238 3.7 7p7e:C
12 6irw:A 494 18 0.1324 0.0182 0.5000 4.0 6irw:B
13 6j9e:C 1288 53 0.2500 0.0132 0.3208 4.3
14 2dt5:B 211 48 0.2941 0.0948 0.4167 4.3 2dt5:A, 3ikt:A, 3ikt:B, 3il2:A, 3il2:B, 1xcb:A, 1xcb:B, 1xcb:C, 1xcb:D, 1xcb:E, 1xcb:F, 1xcb:G
15 8r3r:A 658 34 0.1618 0.0167 0.3235 5.0 8r3r:B, 8r3r:C, 8r3r:D
16 5hod:A 61 54 0.2206 0.2459 0.2778 5.1 5hod:D
17 6xyw:AO 452 31 0.1471 0.0221 0.3226 5.6
18 5dtu:A 404 36 0.1765 0.0297 0.3333 7.5
19 7yp9:C 1230 21 0.1618 0.0089 0.5238 8.2
20 5hsa:A 662 18 0.1176 0.0121 0.4444 8.3 5hsa:B, 5hsa:C, 5hsa:D, 5hsa:E, 5hsa:F, 5hsa:G, 5hsa:H, 5i68:A
21 1vjt:A 471 26 0.1618 0.0234 0.4231 8.6 7br4:A, 7brf:A, 7ctl:A, 7ctm:A, 6kcx:A, 3u95:A, 3u95:B, 3u95:C, 3u95:D, 3u95:E, 3u95:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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