BioLiP

>protein
VGYTPVNPDTSPMLAYSQYHWHYNLPQGMERPHGVNRTMTAPYQSAHSLVNKYRGVWIELDMHPAFRVALEPQLRKLPQG
RTIPKTSVDEVISDYINTAHLIQDEMTRDLWLAKVLQHCAFQRSNEGMALWEKYCHSRFIADGATATPPLPLVKAILFYC
SKIDYQGWSSIFQKCLKNDWNYTPLFDTAQWNFLLKSVGRMGDEKGVRLILEEMLDVQADLDRVEARSIVIALNAVTDND
IYEYIKKYLFNFGERKVKFLRIIYSDLRGHGAGKLRIPLKENDKMFYHVCWHSSIRAPRQFSPRQLYFDYTPSTL

The query sequence (length=315) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7aor:aj	315	315	1.0000	1.0000	1.0000	0.0
2	7pub:DJ	357	315	0.8000	0.7059	0.8000	0.0	6hiv:DJ, 6hiw:DJ, 6hiz:DJ, 7pua:DJ, 6sg9:DJ, 6sgb:DJ
3	7ane:aj	316	316	0.7111	0.7089	0.7089	1.14e-172
4	6q2m:A	544	68	0.0667	0.0386	0.3088	0.24	1ba3:A, 5dwv:A, 4e5d:A, 4g36:A, 4g36:B, 4g37:A, 4g37:B, 5gyz:A, 5gz2:A, 6hps:A, 6hps:B, 3ies:A, 5kyt:A, 5kyt:B, 5kyv:A, 5kyv:B, 6q2m:B, 6q2m:C, 3rix:A, 5wys:A
5	7c5o:O	338	59	0.0571	0.0533	0.3051	0.88	7c5f:O, 7c5f:P, 7c5f:Q, 7c5f:R, 7c5g:O, 7c5g:P, 7c5g:Q, 7c5g:R, 7c5h:O, 7c5h:P, 7c5h:Q, 7c5h:R, 7c5i:O, 7c5i:P, 7c5i:Q, 7c5i:R, 7c5j:O, 7c5j:P, 7c5j:Q, 7c5j:R, 7c5k:O, 7c5k:P, 7c5k:Q, 7c5k:R, 7c5l:O, 7c5l:P, 7c5l:Q, 7c5l:R, 7c5m:O, 7c5m:P, 7c5m:Q, 7c5m:R, 7c5n:O, 7c5n:P, 7c5n:Q, 7c5n:R, 7c5o:P, 7c5o:Q, 7c5o:R, 7c5p:O, 7c5p:P, 7c5p:Q, 7c5p:R, 7c5q:O, 7c5q:P, 7c5q:Q, 7c5q:R, 7c5r:O, 7c5r:P, 7c5r:Q, 7c5r:R, 7c7k:O, 7c7k:P, 7c7k:Q, 7c7k:R
6	8cg6:A	1208	42	0.0476	0.0124	0.3571	0.91
7	6bt2:B	271	38	0.0476	0.0554	0.3947	1.2
8	6y1x:A	252	36	0.0540	0.0675	0.4722	3.1	6y1x:B
9	2j0d:B	445	61	0.0540	0.0382	0.2787	3.6	9bbb:A, 6bdh:A, 6dab:A, 8ewd:A, 8ewm:A, 8ewn:A, 8exb:A, 7ksa:A, 7kvh:B, 7kvs:B, 7uay:A, 7uaz:A, 7uf9:A, 6uni:A, 6unj:A, 6unj:B, 6unl:A, 6unm:A, 6unm:B
10	4ccw:A	285	51	0.0571	0.0632	0.3529	5.2
11	4q86:B	583	48	0.0571	0.0309	0.3750	6.2	4q85:A, 4q85:B, 4q85:C, 4q85:D, 4q85:E, 4q85:G, 4q85:H, 4q86:A, 4q86:C, 4q86:D, 4q86:E, 4q86:G, 4q86:H
12	7q54:C	368	75	0.0730	0.0625	0.3067	9.0	2pkq:O, 2pkq:Q, 2pkq:T, 7q53:O, 7q53:Q, 7q54:Q, 7q54:O, 7q54:A, 7q55:O, 7q55:Q, 7q55:A, 7q55:C, 7q55:E, 7q55:G, 7q55:I, 7q55:K, 7q56:K, 7q56:E, 7q56:I, 7q56:A, 7q56:G, 7q56:C, 7q56:Q, 7q56:O, 7q57:O, 7q57:Q, 7q57:A, 7q57:C, 7q57:G, 7q57:E, 7q57:I, 7q57:K, 7q57:M, 7q57:S
13	3j92:z	130	81	0.0603	0.1462	0.2346	9.4

[Back]