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BioLiP
>protein
VERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQNCVTSPMNIDRNITHLQYCVCIDDCSSSNCMCGQLSMRCWYD
KDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEA
DVREEDSYLFDLDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWD
IKGKLFSCRCGSPKCRHS

The query sequence (length=258) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3hna:A 280 261 1.0000 0.9214 0.9885 0.0 3fpd:A, 3fpd:B, 3hna:B, 4i51:A, 4i51:B, 2igq:A, 2igq:B, 6mbo:A, 6mbo:B, 6mbp:A, 6mbp:B, 3mo0:A, 3mo0:B, 3mo2:A, 3mo2:B, 3mo2:C, 3mo2:D, 3mo5:A, 3mo5:B, 3mo5:C, 3mo5:D, 2rfi:A, 2rfi:B, 3sw9:A, 3sw9:B, 3swc:A, 3swc:B, 7t7m:A, 7t7m:B, 7t7m:C, 7t7m:D, 5ttg:A, 5ttg:B, 5tuz:A, 5tuz:B, 5v9j:A, 5v9j:B, 5vsd:A, 5vsd:B, 5vsf:A, 5vsf:B, 8xpt:A, 8xpt:B, 8xpt:C, 8xpt:D
2 7x73:A 274 261 0.7829 0.7372 0.7739 3.06e-160 7btv:A, 7btv:B, 7buc:A, 7buc:B, 7dcf:A, 7dcf:B, 5jhn:A, 5jhn:B, 5jin:A, 5jin:B, 5jiy:A, 5jiy:B, 5jj0:A, 5jj0:B, 3k5k:A, 3k5k:B, 4nvq:A, 4nvq:B, 2o8j:A, 2o8j:B, 2o8j:C, 2o8j:D, 3rjw:A, 3rjw:B, 5t0k:A, 5t0k:B, 5t0m:A, 5t0m:B, 7t7l:A, 7t7l:B, 7t7l:C, 7t7l:D, 5ttf:A, 5ttf:B, 5ttf:C, 5ttf:D, 5tuy:A, 5tuy:B, 5v9i:A, 5v9i:B, 5v9i:C, 5v9i:D, 5vsc:A, 5vsc:B, 5vse:A, 5vse:B, 7x73:B, 7xua:A, 7xua:B, 7xub:A, 7xub:B, 7xuc:A, 7xuc:B, 7xud:A, 7xud:B
3 6z2a:A 283 272 0.3837 0.3498 0.3640 1.96e-43 6box:A, 6box:B, 6bp4:B, 6bp4:A, 1mvh:A, 1mvx:A, 6z2a:B
4 2r3a:A 270 245 0.3566 0.3407 0.3755 7.54e-43 6p0r:A, 6p0r:B
5 4qen:A 472 267 0.3721 0.2034 0.3596 3.65e-41 4qeo:A, 4qep:A
6 6a5m:A 488 284 0.3682 0.1947 0.3345 2.83e-39 6a5k:A
7 3bo5:A 269 270 0.3566 0.3420 0.3407 1.74e-37
8 6a5n:A 502 289 0.3527 0.1813 0.3149 1.25e-35
9 4nj5:A 482 262 0.3256 0.1743 0.3206 2.02e-33
10 1peg:A 266 274 0.3062 0.2970 0.2883 2.50e-31 1ml9:A, 1peg:B
11 5jlb:A 248 168 0.2287 0.2379 0.3512 6.74e-24 7ea8:L, 4fmu:A, 4h12:A, 6j9j:A, 5jjy:A, 5jle:A, 5lss:A, 5lsx:A, 5lsy:A, 5lsz:A, 5lt6:A, 5lt6:B, 5lt7:A, 5lt8:A, 7lzb:A, 7lzd:A, 7lzf:A, 8q5p:A, 7ty2:A, 7ty3:A, 5v21:A, 5v22:A, 6vdb:A
12 5kkl:B 839 156 0.2209 0.0679 0.3654 4.35e-20
13 5kjh:B 807 147 0.2132 0.0682 0.3741 6.71e-20 5m5g:B
14 5wf7:B 765 147 0.2132 0.0719 0.3741 1.13e-19 5kji:B
15 5tqr:B 809 147 0.2132 0.0680 0.3741 1.65e-19 5bjs:B, 5vk3:B
16 8fbh:A 232 169 0.2287 0.2543 0.3491 3.31e-19 8fbg:A, 8fbg:B, 6kqp:A, 6kqq:A, 6kqq:B, 3ooi:A
17 7kso:A 395 132 0.1977 0.1291 0.3864 1.96e-18 7ksr:A, 7ktp:A
18 5wfd:B 774 124 0.1860 0.0620 0.3871 2.45e-18 5wfc:B
19 7td5:F 447 132 0.1977 0.1141 0.3864 3.36e-18
20 7td5:A 497 132 0.1977 0.1026 0.3864 3.87e-18
21 7w6l:C 158 156 0.1938 0.3165 0.3205 1.25e-17 5f59:A, 5f6k:C, 5f6k:E, 6kiw:K, 7w6l:E
22 7ea5:K 228 158 0.1938 0.2193 0.3165 2.07e-17
23 6ine:A 247 171 0.2054 0.2146 0.3099 2.35e-17 6ago:A, 6ago:B, 3ope:A, 3ope:B, 6wzw:A, 6x0p:A, 6x0p:B, 6x0p:C, 6x0p:D, 4ynm:A, 4ynm:B, 4ynp:A, 4ynp:B, 4ypa:A, 4ypa:B, 4ypa:C, 4ypa:D, 4ype:A, 4ype:B, 4ypu:A, 4ypu:B
24 2w5z:A 180 153 0.2054 0.2944 0.3464 3.88e-17 5f5e:A, 5f6l:A, 6pwv:C, 6pww:C, 7u5v:A, 6u9k:A, 6u9k:B, 6u9m:A, 6u9m:B, 6u9n:A, 6u9n:B, 6u9r:A, 6u9r:B, 2w5y:A, 7w67:C, 7w6a:C, 7w6i:C, 7w6j:C
25 5lsu:A 231 170 0.2171 0.2424 0.3294 7.19e-17 7cro:I, 7e8d:K, 5lsu:B
26 6nzo:S 233 160 0.1860 0.2060 0.3000 1.34e-16 6px3:S
27 7at8:A 311 132 0.1860 0.1543 0.3636 3.12e-16
28 5hyn:A 581 187 0.2287 0.1015 0.3155 3.63e-16 5hyn:F, 5hyn:K, 5hyn:Q, 5ls6:A, 5ls6:G, 5ls6:J, 5ls6:D
29 5wg6:A 517 187 0.2287 0.1141 0.3155 3.75e-16 5wg6:C
30 8tas:E 570 187 0.2287 0.1035 0.3155 3.80e-16 8tb9:E
31 9c8u:A 475 132 0.1860 0.1011 0.3636 4.03e-16
32 6wkr:C 606 187 0.2287 0.0974 0.3155 4.25e-16 4mi0:A, 4mi5:A, 8t9g:I
33 5ij7:B 469 187 0.2287 0.1258 0.3155 4.30e-16 6b3w:A, 6b3w:B, 6c23:K, 6c24:K, 5ij7:A, 5ij8:A, 5ij8:B, 4w2r:A, 4w2r:B
34 8t9g:C 536 187 0.2287 0.1101 0.3155 4.41e-16 8fyh:A, 8fyh:G
35 6cen:A 226 169 0.2171 0.2478 0.3314 1.01e-15 7crp:I, 7crq:L, 7crq:I, 7crr:I, 5upd:A
36 6kiu:K 179 153 0.1938 0.2793 0.3268 3.92e-15 6kiv:K, 6kix:K, 6kiz:K, 7ud5:K
37 7bre:B 163 153 0.1899 0.3006 0.3203 8.17e-15 7bre:E
38 6ven:N 218 132 0.1783 0.2110 0.3485 1.03e-14
39 6ugm:M 188 138 0.1783 0.2447 0.3333 3.01e-14
40 6uh5:M 222 132 0.1744 0.2027 0.3409 4.72e-13 6chg:C
41 4z4p:A 161 156 0.1899 0.3043 0.3141 4.95e-13
42 7xpx:K 167 141 0.1589 0.2455 0.2908 6.47e-09 6boz:A, 6boz:B, 2bqz:A, 2bqz:E, 3f9w:B, 3f9w:A, 3f9w:C, 3f9w:D, 3f9x:B, 3f9x:A, 3f9x:C, 3f9x:D, 3f9y:A, 3f9y:B, 3f9z:B, 3f9z:A, 3f9z:C, 3f9z:D, 4ij8:A, 4ij8:B, 5t5g:A, 5teg:A, 5teg:B, 5th7:A, 5th7:B, 5w1y:A, 5w1y:B, 1zkk:A, 1zkk:B, 1zkk:C, 1zkk:D
43 8sr6:A 451 110 0.1357 0.0776 0.3182 5.61e-04 5czy:A, 8swi:A
44 6o7i:A 741 94 0.0853 0.0297 0.2340 1.4
45 4v6w:AL 155 46 0.0543 0.0903 0.3043 1.7 6xu6:AL, 6xu7:AL, 6xu8:AL
46 3hnm:A 167 52 0.0775 0.1198 0.3846 2.0 3hnm:B, 3hnm:C, 3hnm:D
47 4o30:A 217 119 0.1434 0.1705 0.3109 2.6 4o30:B, 5va6:A, 5va6:B, 5vac:A, 5vah:A, 5vah:B, 5vbc:A, 5vbc:B
48 8dwj:A 339 67 0.0775 0.0590 0.2985 4.2 8dvf:H, 8dvi:H, 8dw6:H, 8gao:G
49 4au7:A 243 105 0.1163 0.1235 0.2857 4.7 4au7:B, 3rq4:A
50 6o7c:A 506 51 0.0620 0.0316 0.3137 7.6 6o6j:A
51 2g46:A 119 93 0.0930 0.2017 0.2581 7.8 2g46:B, 3kmt:A, 3kmt:B, 3kmt:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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