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BioLiP
>protein
TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSNSTQ

The query sequence (length=72) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2b8g:A 72 72 1.0000 1.0000 1.0000 5.04e-47 1z6h:A
2 2ejf:C 69 68 0.4028 0.4203 0.4265 1.39e-12
3 7ybu:A 670 62 0.3889 0.0418 0.4516 9.83e-12 7ybu:B, 7ybu:D, 7ybu:F, 7ybu:H, 7ybu:J
4 5ks8:F 482 66 0.3611 0.0539 0.3939 2.12e-09
5 5ks8:D 580 67 0.3611 0.0448 0.3881 8.58e-09
6 5ks8:C 603 67 0.3611 0.0431 0.3881 9.76e-09
7 3bg5:B 1074 66 0.3333 0.0223 0.3636 1.11e-08 3bg5:D, 8gk8:C, 3hb9:B, 3hb9:D, 3hbl:B, 3hbl:D, 4hnt:B, 4hnt:D, 4hnu:B, 4hnu:D, 4hnv:D, 3ho8:A, 3ho8:C, 3ho8:B
8 4hnv:B 1033 66 0.3333 0.0232 0.3636 1.13e-08 8gk8:D
9 3bg5:A 1137 66 0.3333 0.0211 0.3636 1.18e-08 3bg5:C, 8gk8:A, 8gk8:B, 3hb9:A, 3hb9:C, 3hbl:A, 3hbl:C, 4hnt:A, 4hnt:C, 4hnu:A, 4hnu:C, 4hnv:A, 4hnv:C
10 4qsh:C 1081 67 0.3611 0.0241 0.3881 2.57e-08 4qsh:A, 4qsh:D, 4qsh:B, 4qsk:A, 4qsk:B
11 3va7:A 1130 60 0.3194 0.0204 0.3833 7.34e-08
12 8j78:I 651 62 0.3333 0.0369 0.3871 1.94e-07 8j78:C, 8j7d:D, 8j7d:F, 8j7d:I, 8j7d:L, 8jaw:A, 8jaw:C, 8jaw:E, 8jaw:F, 8jaw:H, 8jaw:K, 8k2v:A, 8k2v:B, 8k2v:C, 8k2v:D, 8k2v:E, 8k2v:F
13 8jxn:J 541 62 0.3333 0.0444 0.3871 2.06e-07
14 5vyz:C 1083 63 0.3056 0.0203 0.3492 5.06e-07 5vyw:A, 5vyw:B, 5vyw:C, 5vz0:C
15 5vyz:A 1144 67 0.3056 0.0192 0.3284 5.42e-07 5vyw:D, 5vyz:B, 5vyz:D, 5vz0:A, 5vz0:B, 5vz0:D, 7zyy:A, 7zyy:C, 7zyy:B, 7zyy:D, 7zyz:A, 7zz0:A, 7zz1:A, 7zz2:A, 7zz3:A, 7zz3:C, 7zz3:B, 7zz3:D, 7zz4:A, 7zz5:A, 7zz6:D, 7zz6:A, 7zz8:A, 7zz8:C, 7zz8:D, 7zz8:B
16 8sgx:X 657 62 0.3611 0.0396 0.4194 9.51e-07 8sgx:S, 8sgx:Z, 8sgx:V, 8sgy:V, 8sgy:B, 8sgy:S, 8sgy:Z, 8sgy:Y, 8sgz:V, 8sgz:Z, 8sgz:X, 8sgz:S, 8sgz:B, 8sgz:Y
17 8pn8:G 213 62 0.3056 0.1033 0.3548 1.85e-06 8pn7:G, 8pn7:H, 8pn7:I, 8pn7:J, 8pn7:K, 8pn7:L, 8pn8:H, 8pn8:I, 8pn8:J, 8pn8:K, 8pn8:L, 6ybq:G, 6ybq:H, 6ybq:I, 6ybq:J, 6ybq:K, 6ybq:L
18 3n6r:A 591 62 0.2778 0.0338 0.3226 7.22e-06 3n6r:C, 3n6r:E
19 3n6r:G 646 62 0.2778 0.0310 0.3226 7.39e-06 3n6r:I, 3n6r:K
20 5csl:A 2050 58 0.3194 0.0112 0.3966 7.82e-06
21 8hwl:A 941 60 0.2917 0.0223 0.3500 4.21e-05 8hwl:B, 8hwl:C, 8hwl:E
22 7wtb:B 1147 60 0.2917 0.0183 0.3500 4.67e-05 3bg3:A, 3bg3:B, 3bg3:C, 3bg3:D, 3bg9:A, 3bg9:B, 3bg9:C, 3bg9:D, 8j7o:A, 8j7o:B, 8j7o:C, 8j7o:E, 7wta:C, 7wta:B, 7wta:D, 7wta:A, 7wtb:C, 7wtb:A, 7wtb:D, 7wtc:C, 7wtc:A, 7wtc:B, 7wtc:D, 7wtd:C, 7wtd:D, 7wte:C, 7wte:D
23 8rth:A 666 43 0.2500 0.0270 0.4186 0.003 8rth:C, 8rth:E, 8rth:G, 8rth:I, 8rth:K
24 2qf7:A 1076 44 0.2222 0.0149 0.3636 0.009 3tw6:A
25 1bdo:A 80 57 0.2500 0.2250 0.3158 0.024 2bdo:A
26 5csl:B 2072 58 0.2917 0.0101 0.3621 0.046 5ctb:A, 5ctb:C, 5ctc:A, 5ctc:B, 5ctc:C, 5cte:B, 5cte:C, 3h0s:A, 3k8x:A, 3k8x:B, 3k8x:C, 1od2:A, 1od2:B, 3pgq:A, 3pgq:C, 3tv5:A, 3tv5:B, 3tv5:C, 3tvu:A, 3tvu:B, 3tvu:C, 3tvw:A, 3tvw:B, 3tvw:C, 3tz3:A, 3tz3:B, 3tz3:C, 1w96:A, 1w96:B, 1w96:C, 4wyo:B, 4wyo:C, 4wz8:B, 4wz8:C
27 5c22:B 267 25 0.1944 0.0524 0.5600 0.21
28 3tw6:B 1129 63 0.2917 0.0186 0.3333 0.59 4jx4:A, 4jx4:B, 4jx4:C, 4jx4:D, 4jx5:A, 4jx5:B, 4jx5:C, 4jx5:D, 4jx6:A, 4jx6:B, 4jx6:C, 4jx6:D, 4loc:A, 4loc:B, 4loc:C, 4loc:D, 4m6v:A, 4m6v:B, 4m6v:C, 4m6v:D, 4mfd:A, 4mfd:B, 4mfd:C, 4mfd:D, 4mfe:A, 4mfe:B, 4mfe:C, 4mfe:D, 4mim:A, 4mim:B, 4mim:C, 4mim:D, 3tw6:C, 3tw6:D
29 7air:A 885 37 0.2083 0.0169 0.4054 1.7 7aip:A, 7aip:B, 7aiq:A, 7aiq:B, 7air:B, 6kkr:A, 6kkr:B, 6kkt:A, 6kkt:B, 6kku:A, 6kku:B, 7tti:A, 7tti:B
30 5i2h:A 335 45 0.2083 0.0448 0.3333 1.9 5i2h:B
31 1uu4:A 224 39 0.1528 0.0491 0.2821 2.0 1uu5:A, 1uu6:A, 1w2u:A
32 2k33:A 116 27 0.1528 0.0948 0.4074 3.7
33 6qau:C 250 26 0.1250 0.0360 0.3462 7.4 6qat:B
34 2bih:A 453 43 0.2361 0.0375 0.3953 7.9 2bii:A, 2bii:B
35 6spf:P 114 26 0.1667 0.1053 0.4615 8.1 8cd1:P, 6spb:P, 6spd:P, 6spg:P, 7unr:R, 7unu:R, 7unv:R, 7unw:R

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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