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BioLiP
>protein
TSARARLIDPGFGIYKVNELVDARDVGLGAWFEAHIHSVTRADEDVIYHIQYDEYPESGTLEMNVKDLRPRARTILKWNE
LNVGDVVMVNYNVESPGQRGFWFDAEITTLKTISRTKKELRVKIFLGTLNDCKIISVDEIFKIERPGAHPLSFADGKFLR
RNDPCDLCGGDPEKKCHSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVWYCPSCK

The query sequence (length=222) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4tvr:A 222 222 1.0000 1.0000 1.0000 7.59e-169
2 4gy5:A 215 217 0.5270 0.5442 0.5392 9.92e-82 3ask:A, 3ask:B, 3ask:D, 3asl:A, 3db3:A, 7fb7:B, 4gy5:B, 6iiw:A, 2lgg:A, 2lgk:A, 2lgl:A, 4qqd:A, 4qqd:B, 3shb:A, 3sou:A, 3sou:B, 3sow:A, 3sow:B, 3sox:A, 3sox:B, 3t6r:B, 3t6r:A, 8wms:A, 5xpi:A, 5yy9:A, 5yy9:B, 3zvy:A, 3zvy:B, 3zvz:B
3 2l3r:A 161 154 0.3784 0.5217 0.5455 9.23e-55 7fb7:A, 5iay:A, 6vyj:A
4 6b9m:A 150 150 0.3514 0.5200 0.5200 4.85e-52 6b9m:B
5 2e6s:A 77 74 0.2703 0.7792 0.8108 1.33e-37
6 7xga:A 126 63 0.1532 0.2698 0.5397 4.29e-19 6vfo:A
7 5vab:A 54 49 0.1126 0.4630 0.5102 3.11e-10
8 1f62:A 51 46 0.0991 0.4314 0.4783 5.02e-08
9 2mny:A 55 45 0.0901 0.3636 0.4444 5.35e-06 2mnz:A
10 2e6r:A 92 45 0.0901 0.2174 0.4444 1.15e-05
11 6ryr:W 708 49 0.1036 0.0325 0.4694 1.58e-05 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
12 7klo:A 59 45 0.0901 0.3390 0.4444 2.42e-05 7klr:A
13 5szb:A 115 46 0.0856 0.1652 0.4130 5.76e-05 5i3l:A, 5i3l:B, 2kwj:A, 2kwk:A, 2kwn:A, 2kwo:A, 5szc:A
14 6q3m:C 219 49 0.1036 0.1050 0.4694 6.56e-05 6q3m:A, 6q3m:B
15 2miq:A 94 45 0.0811 0.1915 0.4000 8.63e-05
16 6guu:B 204 49 0.0991 0.1078 0.4490 1.42e-04 6guu:A
17 2yql:A 56 46 0.0811 0.3214 0.3913 3.95e-04
18 2puy:B 60 33 0.0676 0.2500 0.4545 5.37e-04 2puy:A
19 5b79:A 118 45 0.0766 0.1441 0.3778 0.001 5vdc:A
20 9atn:A 98 49 0.0721 0.1633 0.3265 0.003
21 9atn:A 98 46 0.0766 0.1735 0.3696 5.2
22 2l5u:A 61 33 0.0676 0.2459 0.4545 0.003
23 6fhq:A 58 45 0.0676 0.2586 0.3333 0.003 6fhq:B, 6fi1:A, 6fi1:B, 4qf3:A, 4qf3:B
24 1mm3:A 61 45 0.0946 0.3443 0.4667 0.004
25 6oie:B 111 53 0.0946 0.1892 0.3962 0.005 6oie:A, 5u2j:B, 5u2j:A
26 2ke1:A 66 45 0.0811 0.2727 0.4000 0.005 2kft:A, 1xwh:A
27 5hh7:A 192 46 0.0766 0.0885 0.3696 0.005
28 4q6f:A 56 46 0.0766 0.3036 0.3696 0.010 6fap:A, 6fap:B, 6fap:C, 6fap:D, 6fhu:A, 6fhu:B, 6fhu:D, 6fhu:C, 6fi0:A, 6fi0:B, 6fi0:C, 6fi0:D, 6fkp:A, 6fkp:D, 6fkp:C, 6fkp:B, 4q6f:B, 4q6f:C, 4q6f:D, 4qf2:A, 4qf2:B, 4qf2:C, 4qf2:D, 5t8r:D, 5t8r:A, 5t8r:B, 5t8r:C
29 2ysm:A 111 46 0.0721 0.1441 0.3478 0.012
30 2ysm:A 111 47 0.0766 0.1532 0.3617 2.9
31 4lk9:A 126 52 0.0856 0.1508 0.3654 0.025 5b75:A, 5b76:A, 5b77:A, 5b78:A, 4ljn:A, 4lka:A, 4llb:A, 4llb:B, 2ln0:A, 6lsb:A, 3v43:A
32 8bpb:C 126 55 0.0991 0.1746 0.4000 0.033 8bpc:C
33 2yt5:A 66 50 0.0676 0.2273 0.3000 0.033
34 8w9c:F 156 46 0.0676 0.0962 0.3261 0.042 8hxx:P, 8hy0:P, 8jho:P, 8w9d:F, 8w9e:F, 8w9f:F
35 3w5j:A 194 63 0.0766 0.0876 0.2698 0.045
36 7yi0:F 120 46 0.0676 0.1250 0.3261 0.054
37 8i02:F 235 47 0.0676 0.0638 0.3191 0.061
38 7yi2:D 321 46 0.0676 0.0467 0.3261 0.10 7yi0:D, 7yi3:D, 7yi4:D, 7yi5:D
39 8i02:G 284 41 0.0631 0.0493 0.3415 0.10 8ifg:P
40 8i02:G 284 33 0.0676 0.0528 0.4545 0.74 8ifg:P
41 8hxx:N 375 46 0.0676 0.0400 0.3261 0.11 8hxy:N, 8hy0:N, 8i3f:B, 8jho:N, 8tof:G, 8w9c:E, 8w9d:E, 8w9e:E, 8w9f:E
42 8kd6:E 301 46 0.0676 0.0498 0.3261 0.11 8kd2:E
43 8ihn:M 357 46 0.0676 0.0420 0.3261 0.12 8kd4:E
44 8bpa:C 213 55 0.0991 0.1033 0.4000 0.17 8c60:C
45 8bpa:C 213 34 0.0631 0.0657 0.4118 0.46 8c60:C
46 7duf:A 62 47 0.0631 0.2258 0.2979 0.29 7duf:B
47 2k16:A 75 46 0.0676 0.2000 0.3261 0.35 5c13:A, 5c13:C, 5c13:E, 5c13:G, 2k17:A, 5wxg:A, 5wxh:C, 5wxh:A, 5xmy:A, 5xmy:C
48 2l43:A 80 45 0.0721 0.2000 0.3556 0.76 2ku3:A
49 2ro1:A 189 45 0.0676 0.0794 0.3333 0.84
50 1fp0:A 88 45 0.0676 0.1705 0.3333 1.3
51 5xfr:A 309 50 0.0676 0.0485 0.3000 1.3 5xfr:B
52 8qxc:L 214 53 0.0766 0.0794 0.3208 1.7 1axs:L, 1axs:A, 1d6v:L, 8qxc:B, 6xli:B, 6xli:D, 6xli:L, 6xtg:L, 6xuk:L
53 2lv9:A 80 26 0.0450 0.1250 0.3846 2.1 4l58:A
54 7c2g:G 196 53 0.0766 0.0867 0.3208 2.1
55 1wew:A 78 51 0.0721 0.2051 0.3137 2.5
56 5zbu:A 74 43 0.0721 0.2162 0.3721 4.1 5zbu:D, 5zc4:A, 5zc4:D
57 8uxu:A 317 52 0.0631 0.0442 0.2692 6.9 8uxu:B, 8uxu:C, 8uxu:D, 8uxu:E, 8uxu:F, 8uxu:G, 8uxu:H, 8uxu:I, 8uxu:J, 8uxu:K, 8uxu:L, 8uxu:M, 8uxu:N
58 6w7z:B 71 43 0.0541 0.1690 0.2791 7.1 6w9a:B, 6w9a:D, 6w9d:B, 6w9d:E, 6w9d:H
59 6u04:A 168 44 0.0721 0.0952 0.3636 8.1 5erc:A
60 1wev:A 88 39 0.0676 0.1705 0.3846 9.1
61 1m2v:A 705 39 0.0541 0.0170 0.3077 9.4
62 6zga:A 751 39 0.0541 0.0160 0.3077 9.5 4bzi:A, 4bzi:D, 4bzi:G, 6gni:A, 1m2o:A, 1m2o:C, 2qtv:A, 6zga:E
63 5xy3:p 89 40 0.0586 0.1461 0.3250 9.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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