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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
TGLTEQEAQEFHGIFVQSMTAFFGIVVIAHILAWLWRPWL

The query sequence (length=40) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7vrj:B 44 40 1.0000 0.9091 1.0000 5.59e-24 7vrj:J, 7vrj:N, 7vrj:P, 7vrj:R, 7vrj:2, 7vrj:4, 7vrj:6, 7vrj:8, 7vrj:0, 8wdu:B, 8wdu:J, 8wdu:N, 8wdu:P, 8wdu:R, 8wdu:2, 8wdu:4, 8wdu:6, 8wdu:8, 8wdu:0, 8wdv:B, 8wdv:J, 8wdv:N, 8wdv:P, 8wdv:R, 8wdv:2, 8wdv:4, 8wdv:6, 8wdv:8, 8wdv:0
2 7vrj:E 43 40 0.8750 0.8140 0.8750 2.29e-21 7vrj:G, 7vrj:T, 7vrj:V, 7vrj:X, 7vrj:Z, 8wdu:E, 8wdu:G, 8wdu:T, 8wdu:V, 8wdu:X, 8wdu:Z, 8wdv:E, 8wdv:G, 8wdv:T, 8wdv:V, 8wdv:X, 8wdv:Z
3 7c52:T 43 40 0.7500 0.6977 0.7500 5.47e-18 5b5m:B, 5b5m:0, 5b5m:E, 5b5m:G, 5b5m:J, 5b5m:N, 5b5m:P, 5b5m:R, 5b5m:T, 5b5m:V, 5b5m:X, 5b5m:Z, 5b5m:2, 5b5m:4, 5b5m:6, 5b5m:8, 5b5m:n, 5b5m:q, 5b5m:s, 5b5m:v, 5b5m:z, 5b5m:AB, 5b5m:AD, 5b5m:AF, 5b5m:AH, 5b5m:AJ, 5b5m:AL, 5b5m:e, 5b5m:g, 5b5m:i, 5b5m:k, 5b5m:c, 5b5n:B, 5b5n:E, 5b5n:G, 5b5n:J, 5b5n:N, 5b5n:P, 5b5n:R, 5b5n:T, 5b5n:V, 5b5n:X, 5b5n:Z, 5b5n:2, 5b5n:4, 5b5n:6, 5b5n:8, 5b5n:0, 5b5n:n, 5b5n:c, 5b5n:q, 5b5n:s, 5b5n:v, 5b5n:z, 5b5n:AB, 5b5n:AD, 5b5n:AF, 5b5n:AH, 5b5n:AJ, 5b5n:AL, 5b5n:e, 5b5n:g, 5b5n:i, 5b5n:k, 7c52:B, 7c52:E, 7c52:G, 7c52:J, 7c52:N, 7c52:P, 7c52:R, 7c52:V, 7c52:X, 7c52:Z, 7c52:2, 7c52:4, 7c52:6, 7c52:8, 7c52:0, 4v8k:AB, 4v8k:AE, 4v8k:AG, 4v8k:AJ, 4v8k:AN, 4v8k:AP, 4v8k:AR, 4v8k:AT, 4v8k:AV, 4v8k:AX, 4v8k:AZ, 4v8k:A2, 4v8k:A4, 4v8k:A6, 4v8k:A8, 4v8k:A0, 4v8k:BB, 4v8k:BE, 4v8k:BG, 4v8k:BJ, 4v8k:BN, 4v8k:BP, 4v8k:BR, 4v8k:BT, 4v8k:BV, 4v8k:BX, 4v8k:BZ, 4v8k:B2, 4v8k:B4, 4v8k:B6, 4v8k:B8, 4v8k:B0, 3wmm:0, 3wmm:B, 3wmm:E, 3wmm:G, 3wmm:J, 3wmm:N, 3wmm:P, 3wmm:R, 3wmm:T, 3wmm:V, 3wmm:X, 3wmm:Z, 3wmm:2, 3wmm:4, 3wmm:6, 3wmm:8, 5y5s:B, 5y5s:E, 5y5s:G, 5y5s:J, 5y5s:N, 5y5s:P, 5y5s:R, 5y5s:T, 5y5s:V, 5y5s:X, 5y5s:Z, 5y5s:2, 5y5s:4, 5y5s:6, 5y5s:8, 5y5s:0
4 7c9r:R 44 40 0.7250 0.6591 0.7250 3.31e-17 7c9r:E, 7c9r:G, 7c9r:J, 7c9r:N, 7c9r:T, 7c9r:V, 7c9r:X, 7c9r:Z, 7c9r:2, 7c9r:6, 7c9r:8, 7c9r:0
5 7c9r:4 44 40 0.7000 0.6364 0.7000 4.17e-17 7c9r:B, 7c9r:P
6 7xxf:B 50 40 0.6500 0.5200 0.6500 3.14e-14 7xxf:0, 7xxf:E, 7xxf:G, 7xxf:J, 7xxf:N, 7xxf:P, 7xxf:R, 7xxf:T, 7xxf:V, 7xxf:X, 7xxf:Z, 7xxf:2, 7xxf:4, 7xxf:6, 7xxf:8
7 6z5r:6 50 40 0.6250 0.5000 0.6250 9.20e-14 6z5r:D, 6z5r:F, 6z5r:I, 6z5r:K, 6z5r:O, 6z5r:S, 6z5r:U, 6z5r:X, 6z5r:Q, 6z5r:Z, 6z5r:B, 6z5r:2, 6z5r:4, 6z5r:8, 6z5r:0, 6z5s:2, 6z5s:6, 6z5s:4, 6z5s:Z, 6z5s:X, 6z5s:U, 6z5s:B, 6z5s:D, 6z5s:F, 6z5s:S, 6z5s:Q, 6z5s:O, 6z5s:K, 6z5s:I
8 7oy8:Q 47 40 0.5500 0.4681 0.5500 3.68e-13 7eqd:B, 7eqd:E, 7eqd:G, 7eqd:J, 7eqd:N, 7eqd:P, 7eqd:R, 7eqd:T, 7eqd:V, 7eqd:X, 7eqd:Z, 7eqd:2, 7eqd:4, 7eqd:6, 7eqd:8, 7eqd:0, 7oy8:1, 7oy8:n, 7oy8:3, 7oy8:5, 7oy8:7, 7oy8:9, 7oy8:W, 7oy8:I, 7oy8:K, 7oy8:O, 7oy8:S, 7oy8:U, 7oy8:Y, 7oy8:d, 7oy8:m
9 6et5:1 55 40 0.5750 0.4182 0.5750 9.92e-12 6et5:4, 6et5:G, 6et5:N, 6et5:Q, 6et5:T, 6et5:W, 6et5:Z, 6et5:c, 6et5:f, 6et5:i, 6et5:l, 6et5:o, 6et5:r, 6et5:u, 6et5:x, 6et5:7
10 7ddq:O 44 40 0.4750 0.4318 0.4750 3.30e-11 7ddq:N, 7ddq:T, 7ddq:S, 7ddq:R, 7ddq:A, 7ddq:E, 7ddq:D, 7ddq:B, 7ddq:K, 7ddq:U, 7ddq:I, 7ddq:G, 7ddq:J, 7ddq:F
11 8b64:A 44 39 0.4250 0.3864 0.4359 9.58e-11 8b64:D, 8b64:E, 8b64:B, 8b64:F, 8b64:T, 8b64:S, 8b64:R, 8b64:O, 8b64:N, 8b64:K, 8b64:I, 8b64:J, 8b64:G, 7yml:B, 7yml:E, 7yml:G, 7yml:J, 7yml:N, 7yml:P, 7yml:R, 7yml:T, 7yml:W, 7yml:Z
12 7o0u:BB 40 39 0.4500 0.4500 0.4615 2.92e-09 7o0u:BA, 7o0u:BC, 7o0u:BD, 7o0u:BE, 7o0u:BF, 7o0u:BG, 7o0u:BH, 7o0u:BI, 7o0u:BJ, 7o0u:bg, 7o0u:bh, 7o0u:BK, 7o0u:BL, 7o0u:BM, 7o0u:BN, 7o0u:BO, 7o0u:BP, 7o0u:BQ, 7o0u:BR, 7o0u:BS, 7o0u:BT, 7o0u:BU, 7o0u:BV, 7o0u:BW, 7o0u:BX, 7o0u:ba, 7o0u:bb, 7o0u:bc, 7o0u:bd, 7o0u:be, 7o0u:bf, 7o0u:bi, 7o0u:bj, 7o0u:bk, 7o0u:bl, 7o0u:bm, 7o0u:bn, 7o0u:bo, 7o0u:bp, 7o0v:BA, 7o0v:BB, 7o0v:BC, 7o0v:BD, 7o0v:BE, 7o0v:BF, 7o0v:BG, 7o0v:BH, 7o0v:BI, 7o0v:BJ, 7o0v:BK, 7o0v:BL, 7o0v:BM, 7o0v:BN, 7o0v:BO, 7o0v:BP, 7o0v:BQ, 7o0v:BR, 7o0v:BS, 7o0v:bl, 7o0v:BT, 7o0v:BU, 7o0v:BV, 7o0v:bn, 7o0v:BW, 7o0v:BX, 7o0v:ba, 7o0v:bb, 7o0v:bc, 7o0v:bd, 7o0v:be, 7o0v:bf, 7o0v:bg, 7o0v:bh, 7o0v:bi, 7o0v:bj, 7o0v:bk, 7o0v:bm, 7o0v:bo, 7o0v:bp, 7o0w:BA, 7o0w:BB, 7o0w:BC, 7o0w:BD, 7o0w:BE, 7o0w:BF, 7o0w:BG, 7o0w:BH, 7o0w:BI, 7o0w:BJ, 7o0w:BK, 7o0w:BL, 7o0w:BM, 7o0w:BN, 7o0w:BO, 7o0w:BP, 7o0w:BQ, 7o0w:BR, 7o0w:BS, 7o0w:BT, 7o0w:BU, 7o0w:BV, 7o0w:BW, 7o0w:BX, 7o0w:ba, 7o0w:bb, 7o0w:bc, 7o0w:bd, 7o0w:be, 7o0w:bf, 7o0w:bg, 7o0w:bh, 7o0w:bi, 7o0w:bj, 7o0w:bk, 7o0w:bl, 7o0w:bm, 7o0w:bn, 7o0w:bo, 7o0w:bp, 7o0x:BA, 7o0x:BB, 7o0x:BC, 7o0x:BD, 7o0x:BE, 7o0x:BF, 7o0x:BG, 7o0x:BH, 7o0x:BI, 7o0x:BJ, 7o0x:BK, 7o0x:BL, 7o0x:BM, 7o0x:BN, 7o0x:BO, 7o0x:BP, 7o0x:BQ, 7o0x:BR, 7o0x:BS, 7o0x:BT, 7o0x:BU, 7o0x:BV, 7o0x:BW, 7o0x:BX, 7o0x:ba, 7o0x:bb, 7o0x:bc, 7o0x:bd, 7o0x:be, 7o0x:bf, 7o0x:bg, 7o0x:bh, 7o0x:bi, 7o0x:bj, 7o0x:bk, 7o0x:bl, 7o0x:bm, 7o0x:bn, 7o0x:bo, 7o0x:bp
13 4v9g:AU 48 39 0.3750 0.3125 0.3846 4.55e-09 7f0l:B, 7f0l:E, 7f0l:G, 7f0l:J, 7f0l:N, 7f0l:P, 7f0l:R, 7f0l:T, 7f0l:W, 7f0l:Z, 7f0l:2, 7f0l:4, 7f0l:6, 7f0l:8, 7pil:BA, 7pil:BB, 7pil:BC, 7pil:BD, 7pil:BE, 7pil:BF, 7pil:BG, 7pil:BH, 7pil:BI, 7pil:BJ, 7pil:BK, 7pil:BL, 7pil:BM, 7pil:BN, 7pqd:BA, 7pqd:BB, 7pqd:BC, 7pqd:BD, 7pqd:BE, 7pqd:BF, 7pqd:BG, 7pqd:BH, 7pqd:BI, 7pqd:BJ, 7pqd:BK, 7pqd:BL, 7pqd:BM, 7pqd:BN, 7pqd:ba, 7pqd:bb, 7pqd:bc, 7pqd:bd, 7pqd:be, 7pqd:bf, 7pqd:bg, 7pqd:bh, 7pqd:bi, 7pqd:bj, 7pqd:bk, 7pqd:bl, 7pqd:bm, 7pqd:bn, 4v9g:A4, 4v9g:A8, 4v9g:AE, 4v9g:AI, 4v9g:AK, 4v9g:AO, 4v9g:AQ, 4v9g:AS, 4v9g:A9, 4v9g:A6, 4v9g:AW, 4v9g:AY, 4v9g:AG, 4v9g:B6, 4v9g:BU, 4v9g:BW, 4v9g:B4, 4v9g:B8, 4v9g:BE, 4v9g:BG, 4v9g:BI, 4v9g:BQ, 4v9g:BS, 4v9g:B9, 4v9g:BO, 4v9g:BY, 4v9g:BK, 7va9:B, 7va9:E, 7va9:G, 7va9:J, 7va9:N, 7va9:P, 7va9:R, 7va9:T, 7va9:V, 7va9:X, 7va9:Z, 7va9:2, 7va9:8, 7va9:0, 7va9:b, 7va9:e, 7va9:g, 7va9:j, 7va9:n, 7va9:p, 7va9:r, 7va9:t, 7va9:v, 7va9:x, 7va9:z, 7va9:4, 7va9:aa, 7va9:ab, 7vb9:B, 7vb9:E, 7vb9:G, 7vb9:J, 7vb9:N, 7vb9:8, 7vb9:0, 7vb9:b, 7vb9:e, 7vb9:g, 7vb9:j, 7vb9:n, 7vb9:p, 7vb9:r, 7vb9:t, 7vb9:v, 7vb9:x, 7vb9:z, 7vb9:4, 7vb9:aa, 7vb9:ab, 7vnm:B, 7vnm:E, 7vnm:G, 7vnm:J, 7vnm:N, 7vnm:P, 7vnm:R, 7vnm:T, 7vnm:V, 7vnm:C, 7vnm:8, 7vnm:0, 7vnm:2, 7vny:B, 7vny:E, 7vny:G, 7vny:J, 7vny:N, 7vny:P, 7vny:R, 7vny:T, 7vny:V, 7vny:C, 7vny:Z, 7vny:2, 7vny:8, 7vny:0, 7vor:B, 7vor:0, 7vor:E, 7vor:G, 7vor:J, 7vor:N, 7vor:P, 7vor:R, 7vor:T, 7vor:V, 7vor:C, 7vor:Z, 7vor:2, 7vor:8, 7vor:b, 7vor:b0, 7vor:e, 7vor:g, 7vor:j, 7vor:n, 7vor:p, 7vor:r, 7vor:t, 7vor:v, 7vor:c, 7vor:z, 7vor:4, 7vor:b8, 7vot:B, 7vot:0, 7vot:E, 7vot:G, 7vot:J, 7vot:N, 7vot:P, 7vot:R, 7vot:T, 7vot:V, 7vot:C, 7vot:Z, 7vot:2, 7vot:8, 7vot:b, 7vot:b0, 7vot:e, 7vot:g, 7vot:j, 7vot:n, 7vot:p, 7vot:r, 7vot:t, 7vot:v, 7vot:c, 7vot:z, 7vot:4, 7vot:b8, 7voy:B, 7voy:E, 7voy:G, 7voy:J, 7voy:N, 7voy:P, 7voy:R, 7voy:T, 7voy:V, 7voy:X, 7voy:Z, 7voy:2, 7voy:8, 7voy:0, 7voy:t, 7voy:5, 7voy:3, 7vy2:B, 7vy2:E, 7vy2:G, 7vy2:J, 7vy2:N, 7vy2:P, 7vy2:R, 7vy2:T, 7vy2:W, 7vy2:Z, 7vy2:2, 7vy2:4, 7vy2:6, 7vy2:8, 7vy2:b, 7vy2:e, 7vy2:g, 7vy2:j, 7vy2:n, 7vy2:p, 7vy2:r, 7vy2:t, 7vy2:w, 7vy2:z, 7vy2:02, 7vy2:04, 7vy2:06, 7vy2:08, 7vy3:B, 7vy3:E, 7vy3:G, 7vy3:J, 7vy3:N, 7vy3:P, 7vy3:R, 7vy3:T, 7vy3:W, 7vy3:Z
14 1lgh:B 43 40 0.4250 0.3953 0.4250 4.31e-08 1lgh:E, 1lgh:H, 1lgh:K
15 6q53:B 43 40 0.4750 0.4419 0.4750 7.00e-08 6q53:E
16 8k5o:4 72 38 0.4250 0.2361 0.4474 1.81e-07
17 8k5o:x 62 39 0.4500 0.2903 0.4615 3.83e-07 8k5o:Z, 8k5o:c, 8k5o:l, 8k5o:o, 8k5o:u, 8k5o:1, 8k5o:7, 8k5o:G, 8k5o:N, 8k5o:Q, 8k5o:T, 8k5o:W, 8k5o:f, 8k5o:i, 8k5o:r
18 7zcu:B 46 40 0.4000 0.3478 0.4000 7.05e-07 7zcu:D, 7zcu:N, 7zcu:H, 7zcu:L, 7zcu:P, 7zcu:J, 7zcu:R, 7zcu:F
19 7zdi:B 49 40 0.4000 0.3265 0.4000 4.48e-06 7zdi:D, 7zdi:J, 7zdi:L, 7zdi:N, 7zdi:P, 7zdi:R, 7zdi:F, 7zdi:H, 7ze3:B, 7ze3:D, 7ze3:P, 7ze3:R, 7ze3:F, 7ze3:H, 7ze3:J, 7ze3:L, 7ze3:N, 7ze8:B, 7ze8:R, 7ze8:D, 7ze8:F, 7ze8:H, 7ze8:J, 7ze8:L, 7ze8:N, 7ze8:P
20 2fkw:B 41 38 0.3250 0.3171 0.3421 1.79e-04 2fkw:D, 2fkw:F, 2fkw:H, 2fkw:J, 2fkw:L, 2fkw:N, 2fkw:P, 2fkw:S, 1kzu:B, 1kzu:E, 1kzu:H, 1nkz:B, 1nkz:D, 1nkz:F
21 7pbw:BA 47 40 0.4250 0.3617 0.4250 2.26e-04 7pbw:BI, 7pbw:BB, 7pbw:BC, 7pbw:BD, 7pbw:BE, 7pbw:BF, 7pbw:BG, 7pbw:BH
22 6zxa:B 44 40 0.3000 0.2727 0.3000 0.001 6zxa:N, 6zxa:D, 6zxa:F, 6zxa:H, 6zxa:J, 6zxa:L
23 8iug:0 50 29 0.3250 0.2600 0.4483 0.002 8hju:W, 8hju:0, 8hju:2, 8hju:4, 8hju:6, 8hju:8, 8hju:B, 8hju:E, 8hju:G, 8hju:I, 8hju:K, 8hju:O, 8hju:Q, 8hju:S, 8hju:U, 8hjv:0, 8hjv:2, 8hjv:4, 8hjv:6, 8hjv:8, 8hjv:B, 8hjv:E, 8hjv:G, 8hjv:I, 8hjv:K, 8hjv:O, 8hjv:Q, 8hjv:S, 8hjv:U, 8hjv:W, 8iug:2, 8iug:4, 8iug:6, 8iug:8, 8iug:B, 8iug:E, 8iug:G, 8iug:I, 8iug:K, 8iug:O, 8iug:Q, 8iug:S, 8iug:U, 8iug:W, 8iun:W, 8iun:U, 8iun:S, 8iun:Q, 8iun:O, 8iun:K, 8iun:I, 8iun:G, 8iun:E, 8iun:B, 8iun:0, 8iun:8, 8iun:6, 8iun:4, 8iun:2, 8j5o:0, 8j5o:8, 8j5o:2, 8j5o:4, 8j5o:6, 8j5o:B, 8j5o:E, 8j5o:G, 8j5o:I, 8j5o:K, 8j5o:O, 8j5o:Q, 8j5o:S, 8j5o:U, 8j5o:W, 8j5p:W, 8j5p:0, 8j5p:2, 8j5p:4, 8j5p:6, 8j5p:8, 8j5p:B, 8j5p:E, 8j5p:G, 8j5p:I, 8j5p:K, 8j5p:O, 8j5p:Q, 8j5p:S, 8j5p:U, 5yq7:E, 5yq7:B, 5yq7:0, 5yq7:8, 5yq7:6, 5yq7:4, 5yq7:2, 5yq7:K, 5yq7:I, 5yq7:G, 5yq7:W, 5yq7:U, 5yq7:S, 5yq7:Q, 5yq7:O
24 1ijd:B 40 37 0.3500 0.3500 0.3784 0.002 1ijd:D, 1ijd:F
25 4ctf:D0 226 17 0.2000 0.0354 0.4706 2.0 4ctf:D3, 4ctf:D1, 4ctf:DZ, 4ctf:D2, 4ctf:D4, 4ctf:D7, 4ctf:D5, 4ctf:D8, 4ctf:D6, 4ctf:D9, 4ctf:Dc, 4ctf:DA, 4ctf:DD, 4ctf:DB, 4ctf:DE, 4ctf:DC, 4ctf:DF, 4ctf:DI, 4ctf:DG, 4ctf:DJ, 4ctf:DH, 4ctf:DK, 4ctf:DN, 4ctf:DL, 4ctf:DO, 4ctf:DM, 4ctf:DP, 4ctf:DS, 4ctf:DQ, 4ctf:DT, 4ctf:DR, 4ctf:DU, 4ctf:DX, 4ctf:DV, 4ctf:DY, 4ctf:DW, 4ctf:Da, 4ctf:Dd, 4ctf:Db, 4ctf:De, 4ctf:Dh, 4ctf:Df, 4ctf:Di, 4ctf:Dg, 4ctf:Dj, 4ctf:Dm, 4ctf:Dk, 4ctf:Dn, 4ctf:Dl, 4ctf:Do, 4ctf:Dr, 4ctf:Dp, 4ctf:Ds, 4ctf:Dq, 4ctf:EA, 4ctf:ED, 4ctf:EB, 4ctf:EE, 4ctf:EC, 2wff:3, 2ws9:3, 2xbo:3
26 6sl1:A 2652 19 0.2000 0.0030 0.4211 7.7 6sky:A, 6sky:B
27 6skz:A 2638 19 0.2000 0.0030 0.4211 8.1 6sl0:A, 6sl0:B
28 6xw2:A 387 32 0.2250 0.0233 0.2812 9.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218