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BioLiP
>protein
STALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK

The query sequence (length=73) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2dyr:I 73 73 1.0000 1.0000 1.0000 9.92e-49 2dyr:V, 2dys:I, 7ev7:V, 6jy3:I, 6jy4:I
2 8b17:A 451 30 0.1918 0.0310 0.4667 0.42 8b18:A, 8b19:A, 8b1a:A, 8b1b:A, 8b1c:A, 8b1d:A, 8b1e:A, 8b1f:A, 8b1g:A, 8b1h:A, 8b1i:A, 8b1j:A, 8b1k:A
3 3j7a:1 120 60 0.2329 0.1417 0.2833 0.93 3jbn:1, 3jbo:1, 3jbp:1, 6okk:a, 8tpu:S1
4 6aci:A 304 31 0.1781 0.0428 0.4194 5.2
5 7y82:A 1341 35 0.1507 0.0082 0.3143 8.3
6 7p37:A 147 15 0.1096 0.0544 0.5333 9.2 7p37:E, 7p37:I, 7p37:C, 7p37:G, 7p37:K, 7p37:B, 7p37:F, 7p37:J, 7p37:D, 7p37:H, 7p37:L, 7p3f:A, 7p3f:C, 7p3f:B, 7p3f:D, 7p3q:A, 7p3q:C, 7p3q:D, 7p3q:E, 7p3q:F, 7p3q:G, 7p3q:B, 7p3q:H

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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