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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SRHWPLFDLRITTPRLQLQLPTEELCDQLIDTILEEDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQALSSKD
FPITRQVDSGSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLDRVAREGAMAEA
LLFRLTRDDWQRHRTVEVRVDGFDRCRPLFG

The query sequence (length=191) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2vzy:C 189 191 0.9895 1.0000 0.9895 5.31e-137
2 2vzz:A 210 210 1.0000 0.9095 0.9095 2.50e-135 2vzy:A, 2vzy:B, 2vzy:D, 2vzz:B, 2vzz:C, 2vzz:D
3 3owc:A 172 77 0.1309 0.1453 0.3247 0.085 3owc:B
4 1s7n:B 179 89 0.1204 0.1285 0.2584 0.095 1s7l:A, 1s7n:A, 1s7n:C, 1s7n:D
5 6c32:A 209 112 0.1466 0.1340 0.2500 0.11 6c37:A
6 6vfn:A 167 97 0.1152 0.1317 0.2268 1.2 6vfn:F, 6vfn:B, 6vfn:C, 6vfn:D, 6vfn:E, 6vfn:H, 6vfn:I, 6vfn:J, 6vfn:G, 6vfn:L, 6vfn:K
7 6l3a:B 393 113 0.1466 0.0712 0.2478 2.3 6l39:A, 6l39:B, 6l3a:A
8 1bog:A 214 82 0.0890 0.0794 0.2073 3.5 1cfn:A, 1cfs:A, 1cft:A, 1hh6:A, 1hh9:A, 1hi6:A, 5nbw:L, 5nbw:A, 5yfi:L
9 5gir:L 212 136 0.1414 0.1274 0.1985 3.5 5gir:B, 5gis:L
10 1cf8:L 215 51 0.0524 0.0465 0.1961 4.5 6jwc:L
11 8onk:F 215 51 0.0524 0.0465 0.1961 4.7 25c8:L, 35c8:L, 1baf:L, 6m87:A, 6m87:E, 6m87:G, 6m87:K, 6m87:C, 6m87:I, 8onk:J, 7tcq:L, 7tcq:B
12 4xp1:L 214 51 0.0524 0.0467 0.1961 4.7 5mhe:L, 4xph:L, 2z92:B
13 1rwc:A 754 138 0.1937 0.0491 0.2681 5.3 1rwf:A, 1rwg:A, 1rwh:A
14 4bz1:L 218 51 0.0524 0.0459 0.1961 5.4 7njz:L, 7nw3:L
15 2x1e:A 354 23 0.0524 0.0282 0.4348 5.6
16 6bb4:L 211 51 0.0524 0.0474 0.1961 5.7 6bb4:M, 6bb4:N
17 1c12:A 214 51 0.0524 0.0467 0.1961 5.8 3g5v:A, 3g5y:A, 5xqw:L
18 1p7k:A 214 51 0.0524 0.0467 0.1961 5.9 2fr4:A, 2fr4:L, 1i8m:L, 1i8m:A, 1jgl:L, 1jnn:L, 1p7k:L, 4s1d:L, 4s1d:D, 4s1d:F, 4s1d:P, 1wej:L, 1xf2:L, 4yr6:B, 4yr6:E
19 8cby:L 211 51 0.0524 0.0474 0.1961 6.0 8cbz:L, 8cc0:L, 8cc1:L, 7ut3:L
20 3ls4:L 215 51 0.0524 0.0465 0.1961 6.1 2bmk:A, 2bmk:L, 8oni:L, 8oni:D, 8onk:L, 8onk:E, 1wc7:A, 1wcb:A, 1wcb:L
21 1a3r:L 220 51 0.0524 0.0455 0.1961 6.6 3bpc:A, 1frg:L, 2g5b:A, 2g5b:C, 2g5b:E, 2g5b:G, 4hgw:A, 1him:H, 1him:J, 1hin:L, 3hzm:A, 3hzy:A, 1ifh:L, 3ijh:A, 3ijh:C, 3ijs:A, 3ijs:C, 3ijy:A, 3ijy:C, 3ikc:A, 3ikc:C, 5mo3:L, 5mp1:L, 5mp1:D, 5mp1:G, 5mp1:K, 5mp3:B, 5mp3:L, 5mp5:F, 5mp5:L, 5mp5:B, 5mth:L, 5mth:B, 5muq:L, 5muq:B, 1n64:L, 4n8c:L, 4n8c:M, 3oke:A, 3okn:A, 3oko:A, 4otx:L, 4otx:M, 8p6i:L, 8p6i:l, 1q9k:A, 1q9l:A, 1q9l:C, 1q9o:A, 1q9o:C, 1q9w:A, 1q9w:C, 2r1w:A, 2r1x:A, 2r1y:A, 2r23:A, 2r2b:A, 2r2e:A, 2r2h:A, 7rm0:B, 7rm0:D, 7rm0:F, 7rm0:H, 8sip:L, 3sy0:A, 7t0f:L, 1t4k:A, 1t4k:C, 3t77:A, 1xcq:E, 1xct:C, 1xf5:A, 1xf5:C
22 2adj:A 211 37 0.0471 0.0427 0.2432 6.6
23 1ct8:A 214 51 0.0524 0.0467 0.1961 6.7 1ct8:C, 5nph:L, 6x7w:L, 6x7w:C
24 6pwr:A 129 31 0.0628 0.0930 0.3871 6.8 6pws:A, 6pwt:A
25 7c94:A 220 51 0.0524 0.0455 0.1961 6.9 7c94:D, 7e6p:L, 8h8q:L, 4web:L
26 3e8u:L 216 51 0.0524 0.0463 0.1961 7.3 1f58:L, 2f58:L, 1qnz:L
27 1kno:E 214 51 0.0524 0.0467 0.1961 7.4 1kno:A, 1kno:C
28 4gko:L 136 31 0.0524 0.0735 0.3226 7.6 4g9a:A, 4g9a:B, 4g9a:C, 4g9a:D, 4gko:G, 4gko:H, 4gko:I, 4gko:J, 4gko:K, 2h2t:B
29 2hrp:M 218 51 0.0524 0.0459 0.1961 7.7 4bkl:B, 6bzy:L, 6gxx:L, 2hrp:L, 5mu0:B, 5mu0:D, 5mu0:F, 5mu0:H, 5mu0:J, 5mu0:L, 5mu0:N, 5mu0:P, 5mu2:B, 5mu2:D, 5mu2:F, 5mu2:H, 5mu2:J, 5mu2:L, 5mu2:N, 5mu2:P, 5mub:B, 5mub:D, 5mub:G, 5mub:J, 5mub:M, 5mub:P, 5mub:S, 5mub:V, 5mv3:B, 5mv3:D, 5mv3:G, 5mv3:J, 5mv3:M, 5mv3:P, 5mv3:S, 5mv3:V, 5mv4:B, 5mv4:D, 5mv4:G, 5mv4:J, 5mv4:M, 5mv4:P, 5mv4:S, 5mv4:V, 4nj9:L, 4nja:L, 3o41:L, 3o41:B, 3o45:L, 3o45:B, 2or9:L, 2or9:M
30 2ck0:L 216 51 0.0524 0.0463 0.1961 7.8 3ck0:L
31 1jgu:L 220 51 0.0524 0.0455 0.1961 7.9 6a9k:L, 6a9k:A, 5b6f:A, 5b6f:C, 5b6f:E, 5b6f:G, 3bae:L, 3bkj:L, 7bxv:L, 1cbv:L, 2cgr:L, 2d03:L, 1dbb:L, 1dbm:L, 2dbl:L, 6dc8:L, 2ddq:L, 5dlm:L, 5dlm:M, 2dqt:L, 2dqu:L, 8ds7:L, 1ehl:L, 5eoq:L, 3eys:L, 3eyu:L, 1f3d:L, 1f3d:J, 4fab:L, 1flr:L, 3fo9:L, 3fo9:A, 1fpt:L, 2gjz:L, 2gjz:A, 2h1p:L, 2hkf:L, 8hrh:B, 4hxb:L, 4hzl:B, 6idg:L, 3iet:A, 3iet:C, 3if1:A, 3ifl:L, 3ifn:L, 3ifo:L, 3ifo:B, 3ifp:L, 3ifp:B, 3ifp:D, 3ifp:F, 1igj:A, 2igf:L, 2ipu:K, 2ipu:L, 6kdi:L, 1keg:L, 1kel:L, 6kx1:B, 1lo3:X, 1lo3:L, 4lqf:L, 1m7d:A, 4m7z:C, 4m7z:L, 1mpa:L, 2mpa:L, 1mrc:L, 1mrd:L, 1mre:L, 1mrf:L, 5my4:A, 5myk:A, 1nak:L, 1nak:M, 4ocx:L, 2ok0:L, 4p3c:L, 4p3d:B, 4p3d:L, 2pcp:A, 2pcp:C, 6pdr:L, 6plh:A, 6pxr:L, 1pz5:A, 4q0x:L, 3qg6:L, 3qg6:A, 1qkz:L, 4qxu:L, 2r0w:L, 2r0z:L, 8rmo:L, 6sf6:L, 1t66:L, 1t66:C, 5t6p:C, 5t6p:A, 5t78:A, 5t78:C, 1tet:L, 4tqe:L, 4tuj:B, 4tuj:D, 4tuk:L, 4tul:L, 4tuo:B, 4tuo:D, 3uo1:L, 3uyr:L, 3v4u:L, 3v52:L, 2vq1:A, 2vq1:E, 3vw3:L, 3wfh:B, 3whx:B, 3wif:B, 6wwc:B, 6wwc:H, 6wx2:B, 6wx2:L, 7y3j:L, 6y54:L, 6y54:N, 1ynk:L, 1ynl:L, 1zea:L
32 3ubx:L 214 51 0.0524 0.0467 0.1961 8.0 3ubx:I
33 6yhq:L 212 51 0.0471 0.0425 0.1765 8.1
34 2y6s:C 217 51 0.0524 0.0461 0.1961 8.2 5eoc:L, 5eoc:M, 2gsi:C, 2gsi:G, 2gsi:A, 2gsi:E, 3pho:A, 2y6s:L
35 3ggw:C 219 51 0.0524 0.0457 0.1961 8.3 1a3l:L, 3cfb:L, 3cfb:A, 1fl3:L, 1fl3:B, 3ggw:A, 1ruq:L, 1rur:L, 1ub5:L, 1ub5:B, 1uz8:A, 1uz8:L, 1xgy:L, 1xgy:M
36 7jks:L 207 51 0.0524 0.0483 0.1961 8.5
37 1qgc:4 218 51 0.0524 0.0459 0.1961 8.6 1acy:L, 1ai1:L, 1ejo:L, 7f35:A, 7f35:C, 7f35:E, 3f58:L, 4gag:L, 4gaj:L, 1ggi:L, 1ggi:M, 1ibg:L, 3s35:L, 7st8:L, 5vxr:L, 5w23:N, 5x2m:L, 2y5t:B
38 1mj7:L 218 51 0.0524 0.0459 0.1961 8.6 1mh5:A, 1mh5:L, 1mjj:A, 1mjj:L, 1q72:L, 1qyg:L, 1riu:L, 1riv:L
39 7qt2:D 214 51 0.0524 0.0467 0.1961 8.6 4j8r:A, 4j8r:C, 1mex:L, 7qt0:B, 7qt0:D, 7qt0:F, 7qt0:H, 7qt0:J, 7qt0:L, 7qt2:B, 7qt3:B, 7qt3:D, 7qt4:B, 4r97:B, 8rtw:A, 8rtw:C, 5tkk:L, 6z7w:A, 6z7w:C, 6z7w:E, 6z7w:G
40 1vpo:L 219 37 0.0471 0.0411 0.2432 8.8
41 1cu4:L 219 37 0.0471 0.0411 0.2432 8.9 2c1p:A, 2c1p:L, 5cp3:A, 6dca:L, 6dca:M, 6dca:N, 6dca:O, 5dyo:B, 5dyo:L, 1f90:L, 1kn2:L, 1kn4:L, 3lex:L, 3lex:B, 3ley:L, 7lki:BBB, 7lki:EEE, 5myo:A, 5myx:A, 5myx:C, 1ncw:L, 1nd0:A, 1nd0:C, 1nd0:E, 1nd0:G, 3o6l:L, 3o6m:L, 4onf:L, 4ong:L, 3sgd:L, 3sgd:I, 3sge:L, 3sge:I, 2w65:B, 2w65:D, 5wtt:L, 5wtt:B, 6x78:L, 6x78:A, 1yec:L, 1yed:L, 1yed:A, 1yee:L, 1yef:L, 1yeg:L, 1yeh:L, 1yei:L, 1yej:L, 1yek:L, 7yzj:L
42 3hns:L 214 51 0.0524 0.0467 0.1961 9.1 3hnt:L, 3hnv:L
43 5erw:B 213 37 0.0471 0.0423 0.2432 9.1 5xwd:D
44 7qu1:B 215 51 0.0524 0.0465 0.1961 9.2 2a6d:A, 4bh7:A, 3cfd:L, 3cfd:A, 1e4w:L, 1e4x:L, 1e4x:M, 1ikf:L, 4odv:L, 3ra7:M, 4uil:L, 4uin:L, 2zjs:L
45 3l1o:L 214 51 0.0524 0.0467 0.1961 9.3 2v17:L
46 7doh:L 218 51 0.0524 0.0459 0.1961 9.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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