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BioLiP
>protein
SGFGDKFKRPVGSWECPVCCVSNKAEDSRCVSCTSEKP

The query sequence (length=38) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7mo3:B 38 38 1.0000 1.0000 1.0000 3.57e-22 7mo3:D, 7mo4:B, 7mo4:D
2 2ebv:A 57 37 0.8158 0.5439 0.8378 1.87e-18
3 7mo2:B 38 38 0.5526 0.5526 0.5526 1.62e-10 3ch5:B, 7mo2:D
4 7mo5:B 36 34 0.5263 0.5556 0.5882 2.03e-10
5 7mnv:B 38 38 0.4737 0.4737 0.4737 3.05e-06
6 7mns:B 38 34 0.3947 0.3947 0.4412 7.02e-06
7 7mnt:B 38 34 0.3421 0.3421 0.3824 6.39e-05 7mnt:D, 7mnu:B
8 2ebr:A 47 25 0.3158 0.2553 0.4800 1.78e-04
9 2ebq:A 47 28 0.3421 0.2766 0.4643 2.05e-04 2gqe:A, 2k0c:A
10 7mo1:B 34 25 0.2632 0.2941 0.4000 0.002
11 7mnp:B 39 26 0.2895 0.2821 0.4231 0.006 7mnp:D, 7mnq:B
12 7mnr:B 40 31 0.2632 0.2500 0.3226 0.056
13 2d9g:A 53 26 0.2895 0.2075 0.4231 0.20
14 8pp6:K 36 26 0.2895 0.3056 0.4231 0.66
15 2j9u:B 47 16 0.2105 0.1702 0.5000 1.2 2j9u:D
16 8f5o:B 1134 23 0.2632 0.0088 0.4348 1.4 8f5p:B
17 2naa:A 94 30 0.3947 0.1596 0.5000 1.5
18 9b4h:A 1908 31 0.2368 0.0047 0.2903 1.7 9b4h:B, 8wa2:A, 8wa2:D, 8wa2:F, 8wa2:B, 8wa2:C, 8wa2:E
19 8ppt:B 1191 14 0.2105 0.0067 0.5714 2.3 8ppu:B, 8ppv:B, 6t8h:B
20 3chv:A 279 11 0.1842 0.0251 0.6364 3.4
21 5diz:A 474 26 0.3158 0.0253 0.4615 3.4 5diz:B, 5ft9:A, 5ft9:B
22 6bni:A 502 15 0.2368 0.0179 0.6000 3.6 6bni:B, 6c86:A, 6c86:B, 5eln:A, 5eln:B, 5eln:C, 5eln:D, 5elo:A, 5elo:B, 5elo:C, 5elo:D, 6hcw:A, 6hcw:B, 7zog:A, 7zog:B, 7zog:C, 7zog:D
23 4pne:B 272 37 0.2895 0.0404 0.2973 3.6 4pne:A
24 2crc:A 52 29 0.3158 0.2308 0.4138 5.4
25 7qty:A 279 16 0.2368 0.0323 0.5625 5.4 7qu0:A
26 8im5:A 66 29 0.3158 0.1818 0.4138 6.0 3b0a:E
27 6me8:A 449 29 0.2632 0.0223 0.3448 6.3 6me6:A, 6me7:A, 6me9:A
28 2dsx:A 52 22 0.2632 0.1923 0.4545 7.6 1rdg:A
29 5jne:A 351 17 0.1579 0.0171 0.3529 9.6 3i2d:A, 5jne:E
30 8fkx:NF 209 27 0.2632 0.0478 0.3704 10.0 8fkr:NF, 8fks:NF, 8fkt:NF, 8fku:NF, 8fky:NF

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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