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BioLiP
>protein
RRMANNARERVRVRDINEAFRELGRMCQLHLKSDQTKLLILQQAVQVILGLEQQVRER

The query sequence (length=58) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2ypb:B 74 60 0.9828 0.7703 0.9500 1.94e-33 2ql2:A, 2ql2:C, 2ypa:B
2 6od3:A 62 60 0.8966 0.8387 0.8667 2.14e-29 6od3:B, 6od3:H, 6od3:E, 6od3:F, 6od4:A, 6od4:B, 6od5:A, 6od5:B, 6od5:C, 6od5:D, 8osb:A
3 1mdy:A 68 57 0.3621 0.3088 0.3684 6.34e-04 1mdy:B, 1mdy:C, 1mdy:D
4 7z5i:A 56 53 0.3103 0.3214 0.3396 0.008 7z5i:B, 7z5k:A, 7z5k:B
5 2ypa:A 67 49 0.3103 0.2687 0.3673 0.011 2ypb:A
6 2ql2:B 59 58 0.3276 0.3220 0.3276 0.050 2ql2:D
7 8osb:B 66 53 0.3448 0.3030 0.3774 0.46
8 6xyw:Ar 137 44 0.2241 0.0949 0.2955 0.49
9 8crx:P 128 39 0.2414 0.1094 0.3590 0.77 8cwo:P
10 8ro0:A 2231 37 0.2586 0.0067 0.4054 1.5 8ro1:A
11 5ygk:C 217 31 0.2069 0.0553 0.3871 3.3 5gul:A, 5gul:B, 5gul:C, 5gul:D, 5ygk:A, 5ygk:B, 5ygk:H, 5ygk:D, 5ygk:E, 5ygk:F, 5ygk:G
12 3bb8:A 420 21 0.1552 0.0214 0.4286 4.5 3bb8:B
13 8qp8:A 1918 37 0.2241 0.0068 0.3514 5.0
14 8q7x:A 1914 37 0.2241 0.0068 0.3514 5.2
15 7abg:A 2174 37 0.2241 0.0060 0.3514 5.2 7abi:A, 8q91:A, 8rc0:A
16 8y6o:C 2227 37 0.2241 0.0058 0.3514 5.8 8h6e:5B, 8h6j:5B, 8qp9:A, 6qw6:5A, 6qx9:5A, 8qxd:A, 8r08:A
17 8i0p:A 2149 37 0.2241 0.0060 0.3514 5.9 8q7q:A, 8q7v:A, 8q7w:A
18 5z56:A 2232 37 0.2241 0.0058 0.3514 6.4 7aav:A, 7abf:A, 8ch6:a, 7dvq:A, 8i0s:A, 5z58:A
19 5z57:A 1978 37 0.2241 0.0066 0.3514 6.4
20 8h6k:5B 2253 37 0.2241 0.0058 0.3514 6.4 8h6l:5B, 8i0u:A, 8i0v:A, 8q7n:A, 8qo9:A, 8qpe:A, 7qtt:a, 8qzs:A
21 8c6j:A 2261 37 0.2241 0.0057 0.3514 6.5 6ah0:A, 6ahd:A, 8bc8:J, 6ff4:A, 6ff7:A, 9fmd:A, 8i0r:A, 8i0t:A, 8i0w:A, 6icz:A, 6id0:A, 6id1:A, 4jk9:A, 4jk9:B, 4jka:A, 4jka:B, 5mqf:A, 5o9z:A, 6qdv:A, 8qoz:A, 8qpa:A, 8qpb:A, 8qpk:A, 8r09:A, 8r0a:A, 8r0b:A, 8rm5:A, 8ro2:A, 7w59:A, 7w5a:A, 7w5b:A, 5xjc:A, 5yzg:A, 6zym:A
22 4ho9:A 294 26 0.1379 0.0272 0.3077 7.4 4ho3:A, 4ho4:A, 4ho5:A, 4ho5:B, 4ho6:A, 4ho8:A, 4ho8:B, 4ho8:C, 4ho8:D, 4ho9:B, 4hoc:A, 4hoc:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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