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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKY

The query sequence (length=79) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4a0c:F 80 79 0.9620 0.9500 0.9620 1.66e-50 8ij1:R, 7shk:R
2 2lgv:A 100 86 0.9494 0.7500 0.8721 5.19e-49 4a0c:D, 8b3g:R, 8b3i:R, 7b5l:R, 7b5m:R, 7b5n:R, 7b5s:R, 8cdk:R, 3dpl:R, 3dqv:R, 3dqv:Y, 4f52:B, 4f52:D, 8gq6:E, 8gq6:D, 8h33:D, 8h33:K, 8h33:L, 8h33:E, 8h34:R, 8h34:Q, 8h34:E, 8h34:D, 8h34:L, 8h34:K, 8h35:E, 8h35:D, 8h35:L, 8h35:K, 8h35:R, 8h35:Q, 8h35:W, 8h35:X, 8h36:E, 8h36:D, 8h37:E, 8h37:D, 8h37:R, 8h37:Q, 8h38:R, 8h3a:R, 8h3f:R, 8h3q:E, 8h3r:E, 8h3r:D, 2hye:D, 8jaq:R, 8jaq:V, 8jas:R, 8jas:V, 8jav:R, 8jav:V, 1ldj:B, 1ldk:C, 5n4w:R, 8or0:B, 8or2:B, 8or3:B, 4p5o:B, 4p5o:D, 7plo:T, 8pql:K, 8q7h:C, 8q7h:D, 8q7r:R, 8qu8:E, 8r5h:R, 6r7i:R, 6r7n:R, 8rhz:C, 8rhz:D, 3rtr:B, 3rtr:D, 3rtr:F, 3rtr:H, 8rwz:R, 8rx0:R, 6ttu:R, 1u6g:B, 8wqa:J, 8wqa:I, 8wqb:I, 8wqb:E, 8wqc:F, 8wqc:J, 8wqe:J, 8wqe:I, 8wqf:I, 8wqf:E, 8wqg:F, 8wqg:J, 8wqh:J, 8wqh:B, 7z8b:R, 7z8r:R, 7z8t:R, 7z8v:R, 7zbz:R
3 7oni:R 86 81 0.5190 0.4767 0.5062 8.16e-25 2ecl:A, 6v9i:R
4 5a31:B 84 83 0.4304 0.4048 0.4096 3.24e-18 5g04:B, 5g05:B, 9gaw:C, 5jg6:A, 5jg6:D, 2mt5:A, 7qe7:C, 4r2y:A, 4r2y:B, 4r2y:C, 4r2y:D, 8s4g:C, 6tm5:B, 6tnt:B, 4ui9:B
5 8a3t:U 114 85 0.3544 0.2456 0.3294 2.17e-11 8a5y:U
6 2ep4:A 74 24 0.1772 0.1892 0.5833 2.49e-04
7 6w7z:B 71 22 0.1392 0.1549 0.5000 0.001 6w9a:B, 6w9a:D, 6w9d:B, 6w9d:E, 6w9d:H
8 1x4j:A 75 22 0.1392 0.1467 0.5000 0.002
9 4v3k:C 75 22 0.1392 0.1467 0.5000 0.003 7ojx:A, 4v3k:F, 4v3l:C
10 6a3z:A 56 39 0.1899 0.2679 0.3846 0.006
11 1iym:A 55 22 0.1266 0.1818 0.4545 0.009
12 7t92:C 317 26 0.1392 0.0347 0.4231 0.035
13 1chc:A 68 22 0.1392 0.1618 0.5000 0.050
14 5zbu:A 74 23 0.1392 0.1486 0.4783 0.084 5zbu:D, 5zc4:A, 5zc4:D
15 5din:B 124 30 0.1266 0.0806 0.3333 0.088 5din:A
16 2ect:A 78 22 0.1392 0.1410 0.5000 0.12
17 6f98:A 78 22 0.1013 0.1026 0.3636 0.19
18 2kiz:A 69 30 0.1519 0.1739 0.4000 0.34 5lg0:A, 5lg7:A, 7p2k:A
19 2l0b:A 91 22 0.1266 0.1099 0.4545 0.37
20 8aaf:e 1527 56 0.1772 0.0092 0.2500 0.47 8agt:e, 8agu:e, 8agv:e, 8agw:e, 8agx:e, 8agz:e
21 6ryr:W 708 51 0.1646 0.0184 0.2549 0.58 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
22 7uhy:D 288 52 0.1899 0.0521 0.2885 0.69
23 3kic:A 520 34 0.1646 0.0250 0.3824 0.84 3kic:B, 3kic:C, 3kic:D, 3kic:E, 3kic:F, 3kic:G, 3kic:H, 3kic:I, 3kic:J, 3kic:K, 3kic:L, 3kic:M, 3kic:N, 3kic:O, 3kic:P, 3kic:Q, 3kic:R, 3kic:S, 3kic:T, 3kie:A, 3kie:B, 3kie:C, 3kie:D, 3kie:E, 3kie:F, 3kie:G, 3kie:H, 3kie:I, 3kie:J, 3kie:K, 3kie:L, 3kie:M, 3kie:N, 3kie:O, 3kie:P, 3kie:Q, 3kie:R, 3kie:S, 3kie:T
24 5o6c:A 252 41 0.1646 0.0516 0.3171 0.99 6t7f:A
25 2lxh:C 58 21 0.1139 0.1552 0.4286 1.2 2lxp:C
26 7uhy:C 578 47 0.1772 0.0242 0.2979 1.2
27 8adl:A 633 40 0.1646 0.0205 0.3250 1.2 8adl:I
28 2c53:A 228 28 0.1392 0.0482 0.3929 1.3 2c56:A, 1lau:E, 1udh:A
29 4lad:B 69 21 0.1139 0.1304 0.4286 1.6
30 5d0m:C 60 22 0.1139 0.1500 0.4091 1.7 5ulh:C, 5ulk:C
31 4rso:A 520 34 0.1646 0.0250 0.3824 1.7
32 7r70:A 150 22 0.1139 0.0600 0.4091 2.0 5d0i:A, 5d0i:B, 5d0k:C, 5d0k:F, 5d0k:I, 5d0k:L, 7r70:B, 7r71:A
33 7l5u:A 520 34 0.1646 0.0250 0.3824 2.2 7l5u:B, 7l5u:C, 7l5u:D, 7l5u:E, 7l5u:F, 7l5u:G, 7l5u:H, 7l5u:I, 7l5u:J, 7l5u:K, 7l5u:L, 7l5u:M, 7l5u:N, 7l5u:O, 7l5u:P, 7l5u:Q, 7l5u:R, 7l5u:S, 7l5u:T, 7l5u:U, 7l5u:V, 7l5u:W, 7l5u:X, 7l5u:Y, 7l5u:Z, 7l5u:a, 7l5u:b, 7l5u:c, 7l5u:d, 7l5u:e, 7l5u:f, 7l5u:g, 7l5u:h, 7l5u:i, 7l5u:j, 7l5u:k, 7l5u:l, 7l5u:m, 7l5u:n, 7l5u:o, 7l5u:p, 7l5u:q, 7l5u:r, 7l5u:s, 7l5u:t, 7l5u:u, 7l5u:v, 7l5u:w, 7l5u:x, 7l5u:y, 7l5u:z, 7l5u:1, 7l5u:2, 7l5u:3, 7l5u:4, 7l5u:5, 7l5u:6, 7l5u:7, 7l5u:8
34 5egc:A 520 34 0.1646 0.0250 0.3824 2.2 3ng9:A, 3ng9:B, 3ng9:C, 3ng9:D, 3ng9:E, 3ng9:F, 3ng9:G, 3ng9:H, 3ng9:I, 3ng9:J, 3oah:A
35 5ait:A 129 75 0.2152 0.1318 0.2267 2.3 5aiu:A, 4ap4:A, 3ng2:A, 3ng2:B, 4ppe:A, 4ppe:B, 2xeu:A
36 4orh:H 142 22 0.1139 0.0634 0.4091 2.4 4ayc:A, 4ayc:B, 4orh:C, 4orh:G, 4orh:K, 4orh:L, 4whv:C, 4whv:D, 4whv:I, 4whv:J
37 6u0r:A 527 34 0.1519 0.0228 0.3529 3.2 8fyw:A, 8fyw:B, 8fyw:C, 8fyw:D, 8fyw:E, 8fyw:F, 8fyw:G, 8fyw:H, 8fyw:I, 8fyw:J, 8fyw:K, 8fyw:L, 8fyw:M, 8fyw:N, 8fyw:O, 8fyw:P, 8fyw:Q, 8fyw:R, 8fyw:S, 8fyw:T, 8fyw:U, 8fyw:V, 8fyw:W, 8fyw:X, 8fyw:Y, 8fyw:Z, 8fyw:a, 8fyw:b, 8fyw:c, 8fyw:d, 8fyw:e, 8fyw:f, 8fyw:g, 8fyw:h, 8fyw:i, 8fyw:j, 8fyw:k, 8fyw:l, 8fyw:m, 8fyw:n, 8fyw:o, 8fyw:p, 8fyw:q, 8fyw:r, 8fyw:s, 8fyw:t, 8fyw:u, 8fyw:v, 8fyw:w, 8fyw:x, 8fyw:y, 8fyw:z, 8fyw:1, 8fyw:2, 8fyw:3, 8fyw:4, 8fyw:5, 8fyw:6, 8fyw:7, 8fyw:8, 3j4p:A, 7kfr:A, 7l6h:A, 7l6h:B, 7l6h:C, 7l6h:D, 7l6h:E, 7l6h:F, 7l6h:G, 7l6h:H, 7l6h:I, 7l6h:J, 7l6h:K, 7l6h:L, 7l6h:M, 7l6h:N, 7l6h:O, 7l6h:P, 7l6h:Q, 7l6h:R, 7l6h:S, 7l6h:T, 7l6h:U, 7l6h:V, 7l6h:W, 7l6h:X, 7l6h:Y, 7l6h:Z, 7l6h:a, 7l6h:b, 7l6h:c, 7l6h:d, 7l6h:e, 7l6h:f, 7l6h:g, 7l6h:h, 7l6h:i, 7l6h:j, 7l6h:k, 7l6h:l, 7l6h:m, 7l6h:n, 7l6h:o, 7l6h:p, 7l6h:q, 7l6h:r, 7l6h:s, 7l6h:t, 7l6h:u, 7l6h:v, 7l6h:w, 7l6h:x, 7l6h:y, 7l6h:z, 7l6h:1, 7l6h:2, 7l6h:3, 7l6h:4, 7l6h:5, 7l6h:6, 7l6h:7, 7l6h:8, 6u0r:B, 6u0r:C, 6u0r:D, 6u0r:E, 6u0r:F, 6u0r:G, 6u0r:H, 6u0r:I, 6u0r:J, 6u0r:K, 6u0r:L, 6u0r:M, 6u0r:N, 6u0r:O, 6u0r:P, 6u0r:Q, 6u0r:R, 6u0r:S, 6u0r:T, 6u0r:U, 6u0r:V, 6u0r:W, 6u0r:X, 6u0r:Y, 6u0r:Z, 6u0r:a, 6u0r:b, 6u0r:c, 6u0r:d, 6u0r:e, 6u0r:f, 6u0r:g, 6u0r:h, 6u0r:i, 6u0r:j, 6u0r:k, 6u0r:l, 6u0r:m, 6u0r:n, 6u0r:o, 6u0r:p, 6u0r:q, 6u0r:r, 6u0r:s, 6u0r:t, 6u0r:u, 6u0r:v, 6u0r:w, 6u0r:x, 6u0r:y, 6u0r:z, 6u0r:1, 6u0r:2, 6u0r:3, 6u0r:4, 6u0r:5, 6u0r:6, 6u0r:7, 6u0r:8, 5uf6:A
38 2ke1:A 66 43 0.1646 0.1970 0.3023 3.4 2kft:A, 1xwh:A
39 7bvw:A 79 14 0.1139 0.1139 0.6429 3.4 7bvw:B
40 6wi7:A 206 22 0.1266 0.0485 0.4545 4.6 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
41 5mwl:A 421 27 0.1266 0.0238 0.3704 5.1 5mw8:A, 5mwl:B, 5mwm:A
42 8i3x:A 60 50 0.1772 0.2333 0.2800 7.3 8i3x:B
43 5j3x:B 389 39 0.1519 0.0308 0.3077 9.7 4a4b:A, 4a4c:A, 1b47:A, 1b47:B, 1b47:C, 3bum:B, 3bun:B, 3buo:B, 3buo:D, 3buw:B, 3buw:D, 3bux:B, 3bux:D, 2cbl:A, 1fbv:A, 4gpl:B, 5hkx:A, 5hky:A, 5hkz:A, 5hl0:A, 5j3x:A, 5j3x:C, 5j3x:D, 5j3x:E, 5j3x:F, 2k4d:A, 5o76:A, 5o76:C, 3ob1:B, 3ob2:B, 3plf:B, 3plf:D, 7siy:A, 6xar:A, 6xar:B, 2y1m:A, 2y1m:B, 2y1m:C, 2y1m:D, 2y1m:E, 2y1m:F, 2y1n:A, 2y1n:C, 1yvh:A
44 6v10:A 521 34 0.1519 0.0230 0.3529 9.7 7ltm:A, 7ltm:B, 7ltm:C, 7ltm:D, 7ltm:E, 7ltm:F, 7ltm:G, 7ltm:H, 7ltm:I, 7ltm:J, 7ltm:K, 7ltm:L, 7ltm:M, 7ltm:N, 7ltm:O, 7ltm:P, 7ltm:Q, 7ltm:R, 7ltm:S, 7ltm:T, 7ltm:U, 7ltm:V, 7ltm:W, 7ltm:X, 7ltm:Y, 7ltm:Z, 7ltm:a, 7ltm:b, 7ltm:c, 7ltm:d, 7ltm:e, 7ltm:f, 7ltm:g, 7ltm:h, 7ltm:i, 7ltm:j, 7ltm:k, 7ltm:l, 7ltm:m, 7ltm:n, 7ltm:o, 7ltm:p, 7ltm:q, 7ltm:r, 7ltm:s, 7ltm:t, 7ltm:u, 7ltm:v, 7ltm:w, 7ltm:x, 7ltm:y, 7ltm:z, 7ltm:1, 7ltm:2, 7ltm:3, 7ltm:4, 7ltm:5, 7ltm:6, 7ltm:7, 7ltm:8, 3ra4:A, 3ra8:A, 3ra9:A, 3raa:A, 7rl1:A, 7rl1:B, 7rl1:C, 7rl1:D, 7rl1:E, 7rl1:F, 7rl1:G, 7rl1:H, 7rl1:I, 7rl1:J, 7rl1:K, 7rl1:L, 7rl1:M, 7rl1:N, 7rl1:O, 7rl1:P, 7rl1:Q, 7rl1:R, 7rl1:S, 7rl1:T, 7rl1:U, 7rl1:V, 7rl1:W, 7rl1:X, 7rl1:Y, 7rl1:Z, 7rl1:a, 7rl1:b, 7rl1:c, 7rl1:d, 7rl1:e, 7rl1:f, 7rl1:g, 7rl1:h, 7rl1:i, 7rl1:j, 7rl1:k, 7rl1:l, 7rl1:m, 7rl1:n, 7rl1:o, 7rl1:p, 7rl1:q, 7rl1:r, 7rl1:s, 7rl1:t, 7rl1:u, 7rl1:v, 7rl1:w, 7rl1:x, 7rl1:y, 7rl1:z, 7rl1:1, 7rl1:2, 7rl1:3, 7rl1:4, 7rl1:5, 7rl1:6, 7rl1:7, 7rl1:8, 6v10:B, 6v10:C, 6v10:D, 6v10:E, 6v10:F, 6v10:G, 6v10:H, 6v10:I, 6v10:J, 6v10:K, 6v10:L, 6v10:M, 6v10:N, 6v10:O, 6v10:P, 6v10:Q, 6v10:R, 6v10:S, 6v10:T, 6v10:U, 6v10:V, 6v10:W, 6v10:X, 6v10:Y, 6v10:Z, 6v10:a, 6v10:b, 6v10:c, 6v10:d, 6v10:e, 6v10:f, 6v10:g, 6v10:h, 6v10:i, 6v10:j, 6v10:k, 6v10:l, 6v10:m, 6v10:n, 6v10:o, 6v10:p, 6v10:q, 6v10:r, 6v10:s, 6v10:t, 6v10:u, 6v10:v, 6v10:w, 6v10:x, 6v10:y, 6v10:z, 6v10:1, 6v10:2, 6v10:3, 6v10:4, 6v10:5, 6v10:6, 6v10:7, 6v10:8, 6v1g:A, 6v1g:B, 6v1g:C, 6v1g:D, 6v1g:E, 6v1g:F, 6v1g:G, 6v1g:H, 6v1g:I, 6v1g:J, 6v1g:K, 6v1g:L, 6v1g:M, 6v1g:N, 6v1g:O, 6v1g:P, 6v1g:Q, 6v1g:R, 6v1g:S, 6v1g:T, 6v1g:U, 6v1g:V, 6v1g:W, 6v1g:X, 6v1g:Y, 6v1g:Z, 6v1g:a, 6v1g:b, 6v1g:c, 6v1g:d, 6v1g:e, 6v1g:f, 6v1g:g, 6v1g:h, 6v1g:i, 6v1g:j, 6v1g:k, 6v1g:l, 6v1g:m, 6v1g:n, 6v1g:o, 6v1g:p, 6v1g:q, 6v1g:r, 6v1g:s, 6v1g:t, 6v1g:u, 6v1g:v, 6v1g:w, 6v1g:x, 6v1g:y, 6v1g:z, 6v1g:1, 6v1g:2, 6v1g:3, 6v1g:4, 6v1g:5, 6v1g:6, 6v1g:7, 6v1g:8, 6v1z:A, 6v1z:B, 6v1z:C, 6v1z:D, 6v1z:E, 6v1z:F, 6v1z:G, 6v1z:H, 6v1z:I, 6v1z:J, 6v1z:K, 6v1z:L, 6v1z:M, 6v1z:N, 6v1z:O, 6v1z:P, 6v1z:Q, 6v1z:R, 6v1z:S, 6v1z:T, 6v1z:U, 6v1z:V, 6v1z:W, 6v1z:X, 6v1z:Y, 6v1z:Z, 6v1z:a, 6v1z:b, 6v1z:c, 6v1z:d, 6v1z:e, 6v1z:f, 6v1z:g, 6v1z:h, 6v1z:i, 6v1z:j, 6v1z:k, 6v1z:l, 6v1z:m, 6v1z:n, 6v1z:o, 6v1z:p, 6v1z:q, 6v1z:r, 6v1z:s, 6v1z:t, 6v1z:u, 6v1z:v, 6v1z:w, 6v1z:x, 6v1z:y, 6v1z:z, 6v1z:1, 6v1z:2, 6v1z:3, 6v1z:4, 6v1z:5, 6v1z:6, 6v1z:7, 6v1z:8
45 7oik:A 4426 37 0.1392 0.0025 0.2973 9.7 7oim:A, 6tax:A, 6tay:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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