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BioLiP
>protein
QALNRVITKIRQVSDLESIFSTTTQEVRRLFGIERVTIYKFREDYFGDFITESEAGGWRKLVGSGWEDPYLNEHQGGRFQ
QNQPFVVDDIYLGETIWEEGKFNLQKPKRPLTDCHIEALESFEVKSCAVVAIFQGQKLWGLLSAFQNSAPRHWDEAEVQL
LMRVADQLGVAIQQAEY

The query sequence (length=177) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6xhh:B 180 177 1.0000 0.9833 1.0000 4.15e-132 6xhg:A, 6xhg:B, 6xhh:A
2 6bhn:A 156 168 0.4746 0.5385 0.5000 1.61e-51 6bho:A
3 3w2z:A 178 180 0.4576 0.4551 0.4500 6.30e-50 5zoh:A
4 5m85:A 159 166 0.3785 0.4214 0.4036 2.30e-39 5m82:A
5 6ob8:A 307 176 0.3503 0.2020 0.3523 4.09e-30 6oap:A, 6oap:B, 6oaq:A, 6oaq:B, 6ob8:B
6 7lsd:B 152 163 0.2825 0.3289 0.3067 4.81e-24 7lsd:A, 7lsd:C, 7lsd:D
7 7lsc:A 161 163 0.2881 0.3168 0.3129 5.04e-24 7lsc:B, 7lsc:C, 7lsc:D, 6mgh:A, 6mgh:B, 6mgh:C, 6mgh:D, 6mgh:E, 6mgh:F, 6mgh:G, 6mgh:H
8 6ozb:C 193 187 0.3616 0.3316 0.3422 1.20e-21 6ozb:A, 6ozb:B
9 4fof:A 168 151 0.2599 0.2738 0.3046 1.96e-19 4glq:A, 2m7u:A, 2m7v:A, 6p58:A, 6p58:B, 6pru:A, 6pru:B, 6pry:A, 6pry:B, 6upp:A, 6upp:B, 3vv4:A, 3vv4:B
10 2k2n:A 172 171 0.3107 0.3198 0.3216 4.47e-19 2lb9:A
11 6uv8:A 183 187 0.2938 0.2842 0.2781 6.01e-17 6uvb:A
12 4bwi:A 381 179 0.2655 0.1234 0.2626 7.55e-11 4bwi:B
13 9eut:A 728 152 0.2260 0.0549 0.2632 1.21e-10 3c2w:A, 3c2w:B, 3c2w:C, 3c2w:D, 3c2w:E, 3c2w:F, 3c2w:G, 3c2w:H, 9eut:B, 9euy:A, 9euy:B, 3g6o:A, 3g6o:B, 3ibr:A, 3ibr:B, 3nhq:A, 3nhq:B, 3nhq:C, 3nhq:D, 3nhq:E, 3nhq:F, 3nhq:G, 3nhq:H, 3nop:C, 3not:C, 3nou:C
14 8u8z:A 517 150 0.1977 0.0677 0.2333 3.23e-10 8u4x:A, 8u4x:B, 8u62:B, 8u62:A, 8u63:A, 8u63:B, 8u8z:B
15 8u64:A 487 150 0.1977 0.0719 0.2333 3.24e-10 8u64:B, 8u65:B, 8u65:A
16 4r6l:A 473 184 0.2542 0.0951 0.2446 1.34e-09 4e04:A, 4e04:B, 4r6l:B, 4s21:A, 4s21:B
17 2vea:A 500 156 0.2034 0.0720 0.2308 7.68e-09
18 6g1y:B 493 171 0.2034 0.0730 0.2105 2.24e-08 6g1y:A, 6g1z:A, 6g1z:B, 6g20:A, 6g20:B
19 4r70:A 498 153 0.1921 0.0683 0.2222 4.32e-08 2ool:A, 2ool:B, 4r70:B
20 6bap:A 505 172 0.2486 0.0871 0.2558 5.44e-08 6baf:A, 6bak:A, 6bao:A, 6bao:B, 6bap:B, 6bap:C, 6bay:A, 6bay:B, 6bay:C, 4rq9:A
21 4our:A 448 162 0.2429 0.0960 0.2654 8.86e-08 4our:B
22 6tc7:BBB 319 158 0.2429 0.1348 0.2722 9.59e-08 6tc7:AAA
23 7rzw:B 864 163 0.2429 0.0498 0.2638 2.18e-07 7rzw:A
24 6tby:AAA 320 164 0.2260 0.1250 0.2439 3.03e-07 6tc5:AAA
25 8iff:A 868 161 0.2203 0.0449 0.2422 3.46e-07 8f5z:B, 8f5z:A, 8iff:B, 8isj:A, 8isj:B
26 6tl4:A 496 157 0.2034 0.0726 0.2293 1.98e-06
27 7l5a:A 477 130 0.1864 0.0692 0.2538 2.49e-06
28 7jr5:A 482 160 0.1977 0.0726 0.2188 2.61e-06 7jr5:B, 7jri:A, 7jri:B, 6ptq:A, 6ptq:B, 6ptx:A, 6ptx:B, 6pu2:A, 6pu2:B
29 8isk:B 848 163 0.2316 0.0483 0.2515 3.05e-06 8isk:A
30 6et7:A 646 174 0.1977 0.0542 0.2011 9.03e-06 6et7:B
31 5llw:B 673 174 0.1977 0.0520 0.2011 1.06e-05 5llw:A, 5llx:A, 5llx:B, 5lly:D, 5lly:A, 5lly:C, 5lly:B, 6saw:A, 6saw:B, 6saw:C, 6saw:D, 6saw:E, 6saw:F, 6saw:G, 6saw:H, 6sax:B, 6sax:A
32 6pl0:B 608 149 0.2147 0.0625 0.2550 1.32e-04 5akp:A, 5akp:B, 7l59:A, 6ndo:A, 6ndo:B, 6ndp:A, 6ndp:B, 6pl0:A, 5uyr:A, 5uyr:B
33 4gw9:A 628 145 0.1695 0.0478 0.2069 2.43e-04 4gw9:B, 4gw9:C, 4gw9:D, 5oy5:A, 5vik:A, 5viq:A, 5viv:A, 4xtq:A
34 6fht:B 735 63 0.1130 0.0272 0.3175 2.79e-04 5ajg:A, 8avv:A, 8avv:B, 8avx:A, 8avx:B, 8bor:A, 8bor:B, 8bor:C, 8bor:D, 8c3i:B, 8c3i:A, 5c5k:A, 5c5k:B, 5c5k:C, 5c5k:D, 4cqh:A, 6fht:A, 6ftd:A, 6ftd:B, 4ijg:A, 5k5b:A, 5l8m:A, 5lbr:A, 5mg0:A, 5mg1:A, 5nfx:A, 5nm3:A, 5nm3:B, 5nm3:C, 5nm3:D, 5nwn:A, 5nwn:B, 5nwn:C, 5nwn:D, 4o01:A, 4o01:B, 4o01:C, 4o01:D, 4o0p:A, 4o0p:B, 4o8g:A, 2o9b:A, 2o9c:A, 4q0h:A, 4q0i:A, 4q0j:A, 3s7n:A, 3s7o:A, 3s7p:A, 3s7q:A, 8sgk:A, 8sgk:B, 6t3l:B, 6t3l:A, 6t3u:B, 6t3u:A, 4y3i:A, 4y5f:A, 4z1w:A, 7z9d:A, 7z9e:A, 4zrr:A, 1ztu:A
35 8avw:B 579 63 0.1130 0.0345 0.3175 3.45e-04 8avw:A
36 8upk:A 739 160 0.1808 0.0433 0.2000 0.001 8uph:A, 8uph:B, 8upk:B, 8upm:A, 8upm:B
37 3ojf:A 257 42 0.0734 0.0506 0.3095 2.5 3ojf:D, 3ojf:B, 3ojf:C, 2qio:A, 2qio:B, 2qio:C, 2qio:D, 5ycr:A, 5ycr:B, 5ycr:C, 5ycr:D, 5ycs:A, 5ycs:B, 5ycs:C, 5ycs:D
38 6dt1:A 464 60 0.1186 0.0453 0.3500 3.9 6dt1:E
39 8c45:A 1218 47 0.1130 0.0164 0.4255 6.5 8c45:B, 8q56:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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