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BioLiP
>protein
PHPGEALYEAQCASCHGKDGKGGLAGGELLGCDVCGDFSLLALRIEQTMPLGNPEQCDTQCSSQIAGYMLENFAGLPPT

The query sequence (length=79) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8q1v:A 79 79 1.0000 1.0000 1.0000 7.71e-54
2 4v2k:A 235 81 0.3544 0.1191 0.3457 9.84e-06 4wq7:A, 4wq8:A, 4wq9:A, 4wqa:A, 4wqb:A, 4wqc:A, 4wqd:A, 4wqe:A
3 7w2j:C 418 23 0.2025 0.0383 0.6957 7.90e-04 8jej:C, 8jek:C, 8k6j:C, 8k6k:C, 7w2j:F, 7wsq:C, 7wsq:F, 8xcm:C, 8xcn:C
4 5lo9:A 471 77 0.3038 0.0510 0.3117 0.005 5lo9:B
5 4j20:A 88 65 0.2911 0.2614 0.3538 0.007 4j20:B
6 6rtd:B 466 28 0.1899 0.0322 0.5357 0.014 6rtd:A, 6rte:A, 6rte:B
7 7b21:AAA 92 77 0.3165 0.2717 0.3247 0.036
8 8yts:A 83 19 0.1519 0.1446 0.6316 0.075 8yts:B
9 2xts:D 204 81 0.2785 0.1078 0.2716 0.20 2xts:B
10 7o38:A 81 29 0.1519 0.1481 0.4138 0.28
11 8q1w:A 80 64 0.2532 0.2500 0.3125 0.39 8q1w:B, 8q1w:C
12 6xkw:p 254 24 0.1266 0.0394 0.4167 0.45 6xkx:p, 6xkz:p
13 6xkw:p 254 23 0.1392 0.0433 0.4783 7.2 6xkx:p, 6xkz:p
14 2zoo:A 438 19 0.1139 0.0205 0.4737 0.47
15 5xdh:A 86 25 0.1392 0.1279 0.4400 0.60 5xdh:B, 5xdh:C, 5xdh:D
16 6hwh:i 162 70 0.2785 0.1358 0.3143 0.79 6hwh:j
17 6hwh:i 162 19 0.1139 0.0556 0.4737 7.5 6hwh:j
18 6adq:C 223 70 0.2785 0.0987 0.3143 0.82 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
19 6adq:C 223 19 0.1139 0.0404 0.4737 7.7 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
20 5djq:C 303 81 0.3038 0.0792 0.2963 1.7 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
21 1aom:B 559 78 0.3038 0.0429 0.3077 1.9 1aof:A, 1aof:B, 1aom:A, 1aoq:A, 1aoq:B, 1dy7:A, 1dy7:B, 1e2r:A, 1e2r:B, 1gq1:A, 1gq1:B, 1h9x:A, 1h9x:B, 1h9y:A, 1h9y:B, 1hcm:A, 1hcm:B, 1hj3:A, 1hj3:B, 1hj4:A, 1hj4:B, 1hj5:A, 1hj5:B, 1qks:A, 1qks:B
22 8sl7:D 544 46 0.1772 0.0257 0.3043 2.5 8sl7:A, 8sl7:B, 8sl7:C
23 8snh:G 304 19 0.1013 0.0263 0.4211 3.6
24 8snh:G 304 21 0.1139 0.0296 0.4286 3.9
25 7e1w:O 223 17 0.1266 0.0448 0.5882 4.3 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
26 6btm:E 161 37 0.2025 0.0994 0.4324 4.3
27 1ccr:A 111 27 0.1266 0.0901 0.3704 4.7
28 1gjq:A 541 54 0.2658 0.0388 0.3889 6.1 1bl9:A, 1bl9:B, 1gjq:B, 5guw:M, 5guw:N, 1hzu:A, 1hzv:A, 1n15:A, 1n15:B, 1n50:A, 1n50:B, 1n90:A, 1n90:B, 1nir:A, 1nir:B, 1nno:A, 1nno:B, 6tpo:A, 6tsi:A, 6tsi:B
29 7vzg:C 193 21 0.1139 0.0466 0.4286 6.5 7vzr:C
30 4k2x:B 490 53 0.2532 0.0408 0.3774 6.7 4k2x:A
31 1a2s:A 89 76 0.2785 0.2472 0.2895 6.7 1ced:A, 1ctj:A
32 5c2v:D 770 36 0.1519 0.0156 0.3333 6.9 5c2v:A, 5c2w:A, 5c2w:D
33 3pmq:A 593 75 0.2911 0.0388 0.3067 7.7
34 8smr:G 312 30 0.1392 0.0353 0.3667 8.5
35 8smr:G 312 24 0.1266 0.0321 0.4167 9.9
36 7qhm:C 233 17 0.1139 0.0386 0.5294 9.4 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
37 2l4d:A 106 43 0.1772 0.1321 0.3256 9.8
38 7uxa:D 264 15 0.1139 0.0341 0.6000 10.0 7zrz:CP1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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