BioLiP

>protein
PGKATGKGKPVNNKWLNNAGKDLGSPVPDRIANKLRDKEFKSFDDFRKKFWEEVSKDPELSKQFSRNNNDRMKVGKAPKT
RTQDVSGKRTSFELHEEKVYDMDNISVVTPKRHIDIHR

The query sequence (length=118) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3fbd:A	132	125	0.9831	0.8788	0.9280	6.96e-80	7cei:B, 3fbd:D, 3gjn:B, 3gjn:C, 3gkl:A, 2ivh:A, 2jaz:B, 2jaz:D, 2jb0:B, 2jbg:B, 2jbg:D, 1m08:A, 1m08:B, 1mz8:B, 1mz8:D, 1pt3:A, 1pt3:B, 3zfk:A, 3zfk:B, 1zns:A, 1znv:B, 1znv:D
2	3u43:B	132	125	0.7203	0.6439	0.6800	5.80e-56
3	1fsj:B	134	125	0.6780	0.5970	0.6400	4.97e-51	1fr2:B, 1fsj:C, 1fsj:D, 1fsj:E, 2gyk:B, 2gyk:F, 2gze:B, 2gzf:B, 2gzg:B, 2gzi:B, 2gzj:B, 2gzj:F, 1v13:A, 1v13:B, 1v14:A, 1v14:B, 1v14:C, 1v14:D, 1v15:B, 1v15:D, 1v15:C
4	4qko:D	133	125	0.5000	0.4436	0.4720	7.32e-38	4qko:B, 4qko:F, 4qko:H
5	1v15:A	106	124	0.5339	0.5943	0.5081	1.27e-31
6	8qlg:A	624	22	0.1017	0.0192	0.5455	0.29	8qlg:B
7	8xop:A	178	49	0.1441	0.0955	0.3469	0.65	8xop:B, 8xop:C, 8xop:D, 8xop:E, 8xop:F, 8xop:G
8	4a15:A	596	71	0.1610	0.0319	0.2676	1.7	5h8w:A, 2vsf:A
9	3i58:A	328	19	0.0678	0.0244	0.4211	5.1	3i53:A, 3i53:B, 3i58:B, 3i5u:A, 3i5u:B, 3i64:A, 3i64:B
10	7mq8:SP	1993	55	0.1271	0.0075	0.2727	6.6	7mq9:SP
11	7mqa:SP	2485	55	0.1271	0.0060	0.2727	6.8
12	6jp4:A	770	26	0.0932	0.0143	0.4231	9.3	6jp4:B, 6jp4:C, 6jph:A, 6jpn:A

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