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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKAKTNREKFYL
YNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVT
FTHEQNINERIKLMNKFSQIFLNGLS

The query sequence (length=186) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1jt0:A 188 186 1.0000 0.9894 1.0000 3.20e-132 3bqz:A, 3br0:A, 3br1:A, 3br2:B, 3br2:A, 3br3:A, 3br5:A, 3br6:A, 3bt9:B, 3bt9:A, 3btc:A, 3bti:A, 3btj:B, 3btj:A, 3btl:A, 2g0e:D, 2gby:A, 1jt0:B, 1jt0:C, 1jt0:D, 1jt6:B, 1jt6:A, 1jtx:A, 1jty:A, 1jum:A, 1jup:A, 1jus:A, 3pm1:A, 1qvt:A, 1qvu:B, 1qvu:A, 1rkw:A, 1rpw:B
2 2eh3:A 171 52 0.1452 0.1579 0.5192 2.22e-10
3 5h58:B 204 54 0.1290 0.1176 0.4444 4.95e-09 5h58:A, 5h58:C, 5h58:D, 4pxi:A, 4pxi:B, 4pxi:C, 4pxi:D
4 7eqf:A 184 86 0.1774 0.1793 0.3837 1.16e-08 7eqf:B, 7eqf:C, 7eqf:D
5 3hgy:A 202 52 0.1398 0.1287 0.5000 2.31e-08 2qco:A, 3qqa:A
6 6ayh:A 192 150 0.2258 0.2188 0.2800 3.18e-08
7 8sva:A 200 161 0.1828 0.1700 0.2112 6.65e-08 8suk:D, 8suk:C, 8sva:F, 8sva:G, 8sva:T, 8t5y:A
8 6wp9:E 218 186 0.2258 0.1927 0.2258 3.08e-07 6wp9:A, 6wp9:B, 6wp9:C, 6wp9:D, 6wp9:F, 6wp9:G, 6wp9:H, 6wpa:A, 6wpa:B
9 8svd:T 197 147 0.1774 0.1675 0.2245 3.08e-06 8sua:A, 8svd:A, 8svd:G, 8svd:F, 8svd:E, 8svd:I, 8svd:J, 8svd:K
10 6ayi:A 183 64 0.1022 0.1038 0.2969 6.81e-06 6ayi:B, 6ayi:C, 6ayi:D
11 6g8g:A 195 68 0.1129 0.1077 0.3088 8.98e-06 6g8g:B, 6g8g:C, 6g8g:D, 6g8h:CCC, 6g8h:BBB
12 6srn:A 187 74 0.1022 0.1016 0.2568 1.04e-05
13 5k7z:A 185 134 0.1720 0.1730 0.2388 1.60e-05 5k7h:A, 5k7h:B, 5k7z:B, 5k7z:C, 5k7z:D
14 5dy0:A 220 53 0.1022 0.0864 0.3585 1.86e-05 5dy0:B, 5dy0:C, 5dy0:D, 5dy1:A, 5dy1:B, 6gy3:A, 6gy3:B
15 4aci:B 177 62 0.1022 0.1073 0.3065 2.18e-05 4aci:A, 4af5:A
16 6o6n:A 195 52 0.1022 0.0974 0.3654 2.92e-05 6o6p:A, 6o6p:B
17 3whc:A 190 139 0.1774 0.1737 0.2374 3.16e-05 1vi0:A, 1vi0:B, 3whb:A, 3whb:B, 3whc:B, 3whc:C, 3whc:D, 3whc:E, 3whc:F
18 4i6z:B 200 47 0.1075 0.1000 0.4255 4.70e-05 4i76:A
19 7ju3:B 203 47 0.0968 0.0887 0.3830 2.21e-04 8fw0:A, 8fw0:B, 8fw0:C, 8fw0:D, 8fw3:C, 8fw3:D, 8fw3:A, 8fw3:B, 8fw8:B, 8fw8:C, 8fw8:D, 7jnp:A, 7jnp:B, 7ju3:A, 8ssh:C, 8ssh:D, 8ssh:A, 8ssh:B
20 3qbm:A 199 62 0.0968 0.0905 0.2903 2.47e-04 3qbm:B
21 6z1b:B 202 52 0.1022 0.0941 0.3654 4.74e-04 4jyk:A, 4jyk:B, 3loc:A, 3loc:B, 3loc:C, 3loc:D, 4xk4:A, 4xk4:B, 4xk4:C, 4xk4:D, 6z1b:A
22 4w97:A 196 52 0.0914 0.0867 0.3269 0.001
23 5fmp:A 184 137 0.1559 0.1576 0.2117 0.003 5aqc:A, 5aqc:B, 5cw8:A, 5cw8:B, 5cxi:A, 5cxi:B, 5fmp:B, 5ua1:B, 5ua1:A, 5ua2:A
24 7k1c:B 208 149 0.1774 0.1587 0.2215 0.005 7k1a:A, 7k1a:B, 7k1c:A, 7kd8:A, 7kd8:B, 7kd8:D, 7kd8:C, 2uxh:A, 2uxh:B, 2uxi:A, 2uxi:B, 2uxo:B, 2uxp:A, 2uxp:B, 2uxu:A, 2uxu:B
25 3ang:C 201 49 0.0860 0.0796 0.3265 0.008 3ang:D, 3ang:A, 3ang:B, 3anp:C, 3anp:D, 3anp:A, 3anp:B
26 7xaq:B 201 49 0.0860 0.0796 0.3265 0.010 8hjb:A, 7xaq:D, 7xaq:H, 7xaq:A, 7xaq:G, 7xaq:C
27 5x3r:A 203 52 0.0753 0.0690 0.2692 0.013 7amn:B, 7amn:A, 7amt:B, 7amt:A, 5x3r:B, 5x3r:C, 5x3r:D
28 6yl2:B 192 49 0.0860 0.0833 0.3265 0.019 6yl2:A
29 7e1n:A 210 49 0.0968 0.0857 0.3673 0.026 7e1n:B
30 7xxn:A 198 52 0.0753 0.0707 0.2692 0.062 7xxt:A
31 5gpc:A 190 75 0.0806 0.0789 0.2000 0.096 5gpc:B, 5gpc:C, 5gpc:D
32 5fgl:B 206 47 0.0806 0.0728 0.3191 0.14 5fgl:A, 5fgl:C, 5fgl:D, 5fgl:E, 5fgl:F
33 2i10:B 182 154 0.1452 0.1484 0.1753 0.24 2i10:A
34 6en8:C 191 50 0.0806 0.0785 0.3000 0.25 6el2:A, 6el2:B, 6en8:D, 6en8:F, 6en8:A, 6en8:B, 6en8:E
35 6nsm:A 194 51 0.0860 0.0825 0.3137 0.29 6nsm:B, 6nsn:A, 6nsn:B, 6nsr:A, 6nsr:B
36 5ws4:A 650 58 0.0806 0.0231 0.2586 0.53 5ws4:B
37 6hs0:B 201 47 0.0699 0.0647 0.2766 1.3 6c31:E, 6c31:F, 6c31:G, 6c31:H, 6c31:A, 6c31:B, 6c31:C, 6c31:D, 6hrw:A, 6hrx:A, 6hrx:B, 6hry:A, 6hry:B, 6hrz:A, 6hs0:A, 6hs1:B, 6hs2:B, 5icj:A, 5icj:B, 5n7o:A, 5n7o:B
38 8f6y:E 412 53 0.0753 0.0340 0.2642 1.3 8esk:E, 8f2s:E, 8f6z:E, 7ql5:E, 7smq:E, 7sms:E, 7smt:E
39 3p9t:A 213 51 0.0806 0.0704 0.2941 1.6
40 9avu:B 413 54 0.0806 0.0363 0.2778 2.4
41 2hk1:A 289 56 0.0914 0.0588 0.3036 2.6 2hk1:B, 2hk1:C, 2hk1:D
42 3v1z:A 290 25 0.0699 0.0448 0.5200 3.6 3v1z:B, 3v20:A, 3v20:B, 3v21:A, 3v21:B, 3v21:C, 3v21:D, 3v21:E, 3v21:F, 3v21:G, 3v21:H
43 4ams:A 367 75 0.1290 0.0654 0.3200 4.3 4xul:A
44 2zze:A 744 41 0.0699 0.0175 0.3171 4.5 2zze:B, 2zzf:A, 2zzg:A, 2zzg:B
45 8phu:BU 313 71 0.1183 0.0703 0.3099 5.0 8phs:AC, 8phs:BK, 8phs:BV, 8phs:CD, 8phs:CN, 8phu:AC, 8phu:BK, 8phu:BV, 8phu:CD, 8phu:CN, 8phu:DC, 8phu:EK, 8phu:EV, 8phu:FD, 8phu:FN, 8phu:GC, 8phu:HK, 8phu:HV, 8phu:ID, 8phu:IN, 8phu:JC, 8phu:KK, 8phu:KV, 8phu:LD, 8phu:LN, 8phu:MC, 8phu:NK, 8phu:NU, 8phu:NV, 8phu:OD, 8phu:ON, 8pkh:BC, 8pkh:BM, 8pkh:BR, 8pkh:BT, 8pkh:BX, 8qo0:AV, 8qo0:AW, 8qo0:Ac, 8qo0:Am, 8qo0:Aq, 8qo0:Ar, 8qo0:At, 8qo0:Av, 8qo0:Ax, 8qo0:BJ, 8qo0:BT, 8qo0:BW, 8qo0:BX, 8qo0:Bc, 8qo0:FR, 8qo0:Fb, 8qo0:Ff, 8qo0:Fg, 8qo0:Fi, 8qo0:Fm, 8qo0:GA, 8qo0:KG, 8qo0:KQ, 8qo0:KV, 8qo0:KX, 8qo0:Kb, 8qo0:Kq, 8qo0:Kz, 8qo0:LD, 8qo0:Ov, 8qo0:PF, 8qo0:PK, 8qo0:PM, 8qo0:PO, 8qo0:PQ, 8qo0:Pb, 8qo0:Ps, 8qo0:TT, 8qo0:Tk, 8qo0:Tu, 8qo0:Tz, 8qo0:UB, 8qo0:UF, 8qo0:UK, 8qo0:UW, 8qo1:AW, 8qo1:Ac, 8qo1:Am, 8qo1:Aq, 8qo1:Ar, 8qo1:As, 8qo1:At, 8qo1:Av, 8qo1:Ax, 8qo1:FK, 8qo1:FR, 8qo1:Fb, 8qo1:Ff, 8qo1:Fg, 8qo1:Fh, 8qo1:Fi, 8qo1:Fm, 8qo1:GF, 8qo1:KG, 8qo1:KQ, 8qo1:KV, 8qo1:KX, 8qo1:Kb, 8qo1:Kf, 8qo1:Kq, 8qo1:Ov, 8qo1:PF, 8qo1:PK, 8qo1:PM, 8qo1:PO, 8qo1:PQ, 8qo1:Pf, 8qo1:Tk, 8qo1:Tu, 8qo1:Tz, 8qo1:UB, 8qo1:UF
46 2np5:A 187 79 0.0968 0.0963 0.2278 5.6
47 6lpw:B 436 29 0.0699 0.0298 0.4483 6.5
48 4l62:A 190 47 0.0591 0.0579 0.2340 7.2 4l62:B, 4l62:C, 4l62:D, 4l62:E, 4l62:F, 4l62:G, 4l62:H, 4l62:I, 4l62:J, 4l62:K, 4l62:L, 4l62:M, 4l62:N, 4l62:O, 4l62:P
49 8isz:A 465 81 0.1398 0.0559 0.3210 7.4 8it0:A, 8it0:E, 8it1:I, 8it1:M, 8it1:A, 8it1:E, 8j8h:A, 8j9g:A, 8j9p:A, 8j9p:C, 8jay:A, 8jay:C, 8jay:I, 8jay:M, 8k9g:A, 8k9g:E, 8u72:C, 8u72:E, 8u72:I, 8u72:G
50 8k34:B 434 81 0.1398 0.0599 0.3210 8.5 8ifl:B, 8ifl:G, 8ifl:K, 8ifl:O, 8ifm:B, 8ifm:G, 8ifm:K, 8ifm:O
51 5yej:C 169 47 0.0591 0.0651 0.2340 9.1 5yej:B, 5yej:A
52 5ujj:A 446 135 0.1828 0.0762 0.2519 9.4 2ake:A, 2azx:A, 2azx:B, 2dr2:A, 2quh:A, 2quh:B, 2qui:A, 2qui:B, 2quj:A, 2quj:B, 1r6t:A, 1r6u:A, 5ujj:B
53 6rxb:B 200 47 0.0699 0.0650 0.2766 9.7 6rxb:D, 6rxb:A, 6rxb:C
54 8u7b:C 507 81 0.1398 0.0513 0.3210 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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