Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
NLEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNALNGIRFDPEIPQTLRLE
FAKANTKMAKNKLV

The query sequence (length=94) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5det:B 94 94 1.0000 1.0000 1.0000 2.79e-64 5det:A
2 5tkz:A 89 89 0.5957 0.6292 0.6292 1.99e-35 5tkz:B
3 1fnx:H 174 62 0.2660 0.1437 0.4032 1.08e-04 1fxl:A, 1g2e:A
4 1fnx:H 174 79 0.2234 0.1207 0.2658 0.32 1fxl:A, 1g2e:A
5 7abg:B 169 75 0.2234 0.1243 0.2800 1.12e-04 7a5p:X, 1a9n:B, 1a9n:D, 7abi:B, 6ah0:p, 6ahd:p, 8c6j:Y, 8ch6:s, 7evo:G, 9fmd:p, 8h6e:2C, 8h6j:2C, 8h6k:2C, 8h6l:2C, 8hk1:G, 8i0p:p, 8i0r:p, 8i0s:p, 8i0t:p, 8i0u:p, 8i0v:p, 8i0w:p, 6icz:p, 6id0:p, 6id1:p, 5mqf:X, 6qdv:Y, 8qo9:2B, 6qx9:2B, 8qxd:2B, 8qzs:2B, 8r08:2B, 8r09:2B, 8r0a:2B, 8r0b:2B, 8rm5:2B, 7vpx:G, 7w59:p, 7w5a:p, 7w5b:p, 5xjc:p, 6y53:b, 6y5q:b, 5yzg:p, 5z56:p, 5z57:p, 5z58:p
6 5o1y:A 163 73 0.2553 0.1472 0.3288 4.17e-04 5o1z:A, 5o20:A
7 8xxm:3G 84 87 0.3085 0.3452 0.3333 4.78e-04 5k0y:O, 8pj1:o, 8pj2:o, 8pj3:o, 8pj4:o, 8pj5:o, 8pj6:o
8 4lmz:A 176 82 0.2447 0.1307 0.2805 0.001 3nmr:A, 3nna:A, 3nnc:A, 3nnh:A, 3nnh:C, 3nnh:B, 3nnh:D
9 4ed5:B 169 62 0.2340 0.1302 0.3548 0.002 4ed5:A
10 4ed5:B 169 87 0.2660 0.1479 0.2874 0.017 4ed5:A
11 5m8i:A 114 68 0.2021 0.1667 0.2794 0.006
12 4qqb:A 169 63 0.2447 0.1361 0.3651 0.011 1b7f:A, 1b7f:B, 4qqb:B
13 4qqb:A 169 67 0.2447 0.1361 0.3433 0.026 1b7f:A, 1b7f:B, 4qqb:B
14 8by6:B 152 77 0.2553 0.1579 0.3117 0.011 7abg:A1, 6d0y:A, 1h2t:Z, 1h2u:X, 1h2u:Y, 1n52:B, 5oo6:B, 5oo6:E, 5oo6:H, 5oo6:K, 5oo6:N, 5oo6:Q, 5oo6:T, 5oo6:W, 5oob:D, 5oob:J, 5oob:B, 5oob:G, 8pmp:B, 8pnt:B, 8srr:B, 8suy:B
15 5ifm:C 256 74 0.2660 0.0977 0.3378 0.014 5ifm:A
16 2rqc:A 115 68 0.2021 0.1652 0.2794 0.018
17 7uj1:B 270 74 0.2766 0.0963 0.3514 0.019 7pu5:B, 7pu5:D, 7pu5:H, 7pu5:J, 7pu5:L, 7sp0:B, 7uj1:A
18 6dg0:B 84 82 0.2447 0.2738 0.2805 0.036 6dg0:A
19 6m75:A 167 67 0.2021 0.1138 0.2836 0.037
20 6m75:A 167 60 0.2234 0.1257 0.3500 0.11
21 7qde:B 169 75 0.2447 0.1361 0.3067 0.23 7qdd:B
22 6r5k:H 394 63 0.2128 0.0508 0.3175 0.25 6r5k:D, 6r5k:F
23 6gd2:A 84 77 0.2340 0.2619 0.2857 0.31 6g2k:A, 6g2k:B, 6gc5:A, 6gc5:B, 6gc5:C, 6gc5:D, 6gd2:B, 6gd3:B, 6gd3:C
24 2mgz:B 105 56 0.1702 0.1524 0.2857 0.40 4ch1:A, 4cio:A, 2ru3:A
25 2hsi:B 228 78 0.2660 0.1096 0.3205 0.63 2hsi:A
26 1yj0:A 317 34 0.1383 0.0410 0.3824 0.66 1ala:A, 1yii:A
27 8g5k:A 905 21 0.1170 0.0122 0.5238 0.87
28 8v5r:A 944 21 0.1170 0.0117 0.5238 0.87 8g5i:A, 8g5l:A, 8g5m:A, 8g5n:A, 8g5o:A, 8g5p:A, 8t7e:A
29 8d33:A 974 21 0.1170 0.0113 0.5238 0.88 8d37:A, 8d3r:A, 8d42:A, 8udl:A, 8v54:A
30 8udk:A 1012 21 0.1170 0.0109 0.5238 0.93 5c51:A, 5c52:A, 5c53:A, 4ztu:A, 4ztz:A
31 8g5j:A 941 21 0.1170 0.0117 0.5238 0.96
32 7zew:A 117 81 0.2340 0.1880 0.2716 1.1 7zex:A
33 2n82:B 104 90 0.2128 0.1923 0.2222 1.3 2err:A, 7vrl:B
34 7f0r:D 1339 44 0.1809 0.0127 0.3864 1.4 7vf9:D, 7xl3:D, 7xl4:D, 7xya:D, 7xyb:D
35 5x8p:v 190 19 0.1383 0.0684 0.6842 1.6 5mmj:v, 5mmm:v, 5x8r:v
36 7qvw:AAA 597 52 0.1915 0.0302 0.3462 1.6 1qhb:A, 1qhb:B, 1qhb:C, 1qhb:D, 1qhb:E, 1qhb:F, 7qvw:BBB, 7qvw:CCC, 7qvw:DDD, 7qw3:AAA, 7qw3:BBB, 7qw3:CCC, 7qw3:DDD, 7qwi:AAA, 7qwi:BBB, 7qwi:CCC, 7qwi:DDD, 7qyy:AAA, 7qyy:BBB, 7qyy:CCC, 7qyy:DDD, 1up8:A, 1up8:B, 1up8:C, 1up8:D
37 4f02:A 175 68 0.1915 0.1029 0.2647 2.0 1cvj:A, 1cvj:B, 1cvj:C, 1cvj:D, 1cvj:E, 1cvj:F, 1cvj:G, 1cvj:H, 4f02:D
38 2mqp:A 118 37 0.1596 0.1271 0.4054 2.7 7evr:A, 7evr:C
39 4pkd:B 240 87 0.2447 0.0958 0.2644 3.4 1aud:A, 7b0y:c, 3bo2:A, 3bo3:A, 3bo4:A, 4c4w:A, 4c4w:E, 3cul:A, 3cul:B, 3cun:A, 3cun:B, 7d7v:C, 5ddo:G, 5ddo:C, 5ddp:D, 5ddp:C, 5ddq:D, 5ddq:C, 5ddr:D, 5ddr:C, 7dlz:A, 7dlz:B, 1drz:A, 7dwh:A, 7dwh:B, 1dz5:A, 1dz5:B, 3egz:A, 5fj4:A, 5fj4:E, 3g8s:A, 3g8s:B, 3g8s:C, 3g8s:D, 3g8t:A, 3g8t:B, 3g8t:C, 3g8t:D, 3g96:A, 3g96:B, 3g96:C, 3g96:D, 3g9c:A, 3g9c:B, 3g9c:C, 3g9c:D, 8gxb:C, 8gxb:D, 8gxb:F, 8gxc:C, 8gxc:D, 8gxc:F, 3hhn:B, 3hhn:D, 3iin:A, 3irw:P, 3iwn:C, 3iwn:D, 8jy0:A, 8jy0:C, 8jy0:E, 3k0j:A, 3k0j:B, 3l3c:A, 3l3c:B, 3l3c:C, 3l3c:D, 6las:E, 6las:D, 6las:C, 6lau:E, 6lau:D, 6lau:C, 6lax:D, 6lax:E, 6lax:C, 6laz:D, 6laz:E, 6laz:C, 1m5k:C, 1m5k:F, 1m5o:C, 1m5o:F, 1m5p:C, 1m5p:F, 1m5v:C, 1m5v:F, 3mum:P, 3mur:P, 3mut:P, 3muv:P, 3mxh:P, 2nz4:A, 2nz4:B, 2nz4:C, 2nz4:D, 2oih:A, 2oj3:A, 3p49:B, 4pr6:A, 4prf:A, 7qr3:A, 7qr3:B, 7qr4:A, 6qx9:1A, 3r1h:A, 3r1h:D, 3r1l:A, 3r1l:D, 1sj3:P, 1sj4:P, 1sjf:A, 6sqn:A, 6sqn:B, 6sqn:C, 6sqq:AAA, 6sqq:BBB, 6sqq:CCC, 1u6b:A, 3ucu:P, 3ucz:P, 3ud3:P, 3ud4:P, 1urn:A, 1urn:B, 1urn:C, 1vbx:A, 1vby:A, 1vbz:A, 1vc0:A, 1vc5:A, 1vc6:A, 7vpx:M, 4w90:B, 4w92:B, 1zzn:A
40 1rk8:A 87 80 0.2234 0.2414 0.2625 3.9
41 2mki:A 203 29 0.1383 0.0640 0.4483 4.9
42 2wag:A 217 100 0.3298 0.1429 0.3100 5.6
43 7ane:aa 1514 37 0.1596 0.0099 0.4054 6.8
44 2fon:B 656 61 0.2128 0.0305 0.3279 7.2 2fon:A, 2fon:C
45 6r4o:A 841 48 0.1596 0.0178 0.3125 7.4
46 4ua3:B 193 33 0.1383 0.0674 0.3939 7.4 4ua3:A
47 1anw:A 319 30 0.1277 0.0376 0.4000 7.6 1a8a:A, 1a8b:A, 1anw:B, 1anx:A, 1anx:B, 1anx:C, 1avh:A, 1avh:B, 1avr:A, 1bc0:A, 1bc1:A, 1bc3:A, 1bcw:A, 1bcy:A, 1bcz:A, 1g5n:A, 8gyc:B, 8h0j:A, 8h9z:A, 1hak:B, 1hak:A, 1hvd:A, 1hve:A, 1hvf:A, 6k22:A, 1sav:A, 2xo2:A, 2xo3:A
48 6npl:A 861 29 0.1277 0.0139 0.4138 8.3 6nph:A, 6nph:B, 6npl:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218