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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
NASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFH
LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH
QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP
GGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANLA
VIEQIMRKHDSALATY

The query sequence (length=336) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2q1s:A 336 336 0.9970 0.9970 0.9970 0.0 2pzj:A, 2q1t:A, 2q1u:A, 2q1u:B
2 6pnl:A 336 330 0.3720 0.3720 0.3788 1.47e-63 6pmh:A
3 6dnt:A 310 323 0.2917 0.3161 0.3034 5.40e-33
4 6bwl:A 313 324 0.3006 0.3227 0.3117 1.24e-32
5 4zrn:A 309 323 0.2857 0.3107 0.2972 3.75e-32 4zrm:A, 4zrm:B, 4zrn:B
6 6wj9:B 308 287 0.2738 0.2987 0.3206 1.29e-29 6wj9:A, 6wja:A, 6wja:B, 6wjb:A, 6wjb:B
7 6zll:A 321 325 0.2738 0.2866 0.2831 1.24e-25 6zl6:A, 6zl6:B, 6zla:A, 6zla:B, 6zla:C, 6zla:D, 6zld:A, 6zld:B, 6zlj:A, 6zlj:B, 6zlk:A, 6zlk:B, 6zlk:C, 6zlk:D, 6zll:B, 6zll:C, 6zll:D
8 2b69:A 312 324 0.2738 0.2949 0.2840 3.72e-25 4gll:A, 4gll:B
9 6bi4:C 311 329 0.2560 0.2765 0.2614 1.11e-24 6bi4:B, 6bi4:D, 6bi4:A
10 1bxk:B 344 351 0.3036 0.2965 0.2906 2.62e-24 1bxk:A
11 4lk3:B 274 310 0.2619 0.3212 0.2839 2.44e-23 4lk3:A, 4lk3:C, 4lk3:D, 4lk3:E, 4lk3:F, 4m55:A, 4m55:B, 4m55:C, 4m55:D
12 8sk0:B 330 343 0.2738 0.2788 0.2682 5.50e-23 8shh:A, 8shh:B, 8sk0:A
13 1keu:A 361 364 0.2798 0.2604 0.2582 9.40e-23 1g1a:A, 1g1a:B, 1g1a:C, 1g1a:D, 1keu:B, 1kew:A, 1kew:B
14 2p5u:A 311 324 0.2827 0.3055 0.2932 1.88e-22 2p5u:B, 2p5u:C, 2p5u:D, 2p5y:A
15 1r66:A 322 328 0.2649 0.2764 0.2713 1.19e-20 1r6d:A
16 8vr2:B 321 329 0.2560 0.2679 0.2614 1.63e-20 8vr2:A, 8vr2:C, 8vr2:D
17 3vps:A 303 320 0.2589 0.2871 0.2719 6.02e-20 3vps:B
18 6vlo:A 319 326 0.2500 0.2633 0.2577 2.50e-19 6vlo:B, 6vlo:C, 6vlo:D
19 8wov:B 341 346 0.2798 0.2757 0.2717 5.35e-19 8wop:A, 8wop:B, 8wov:A, 8wow:A, 8wow:B
20 7yst:A 312 321 0.2887 0.3109 0.3022 1.53e-18 7ys8:A, 7ys8:B, 7ys9:A, 7ys9:B, 7ysa:A, 7ysa:B, 7ysm:A, 7ysm:B, 7yst:B, 7ysy:A, 7ysy:B, 7yt0:A, 7yt0:B
21 2hun:A 329 326 0.2500 0.2553 0.2577 1.54e-18 2hun:B
22 5u4q:A 321 342 0.2411 0.2523 0.2368 1.06e-17
23 7xpo:A 344 345 0.2589 0.2529 0.2522 1.95e-17 7xpo:B, 7xpp:B, 7xpp:A, 7xpq:A, 7xpq:B
24 6k0g:A 335 340 0.2649 0.2657 0.2618 2.35e-17 6k0h:A, 6k0i:A
25 8du1:A 361 358 0.2619 0.2438 0.2458 4.05e-17 8du1:B, 8du1:C, 8du1:D
26 6kv9:A 299 328 0.2649 0.2977 0.2713 7.81e-17 6kvc:A
27 2c20:A 329 311 0.2470 0.2523 0.2669 1.26e-16 2c20:B, 2c20:C, 2c20:D, 2c20:E, 2c20:F
28 1a9y:A 338 335 0.2470 0.2456 0.2478 2.53e-16 1a9z:A, 5gy7:A, 5gy7:B, 1kvq:A, 1kvr:A, 1kvs:A, 1kvt:A, 1kvu:A, 1lrj:A, 1lrk:A, 1lrl:A, 1nah:A, 1nai:A, 1uda:A, 1udb:A, 1udc:A, 2udp:A, 2udp:B, 1xel:A
29 1sb8:A 341 327 0.2321 0.2287 0.2385 1.05e-14 1sb9:A
30 5u4q:B 304 342 0.2470 0.2730 0.2427 1.62e-14
31 3lu1:A 336 329 0.2470 0.2470 0.2523 3.37e-14 3lu1:B, 3lu1:C, 3lu1:D, 3ru7:A, 3ru7:B, 3ru7:C, 3ru7:D, 3ru9:A, 3ru9:B, 3ru9:C, 3ru9:D, 3rua:A, 3rua:B, 3rua:C, 3rua:D, 3ruc:A, 3ruc:B, 3ruc:C, 3ruc:D, 3rud:A, 3rud:B, 3rud:C, 3rud:D, 3rue:A, 3rue:B, 3rue:S, 3rue:b, 3ruf:A, 3ruf:B, 3ruf:S, 3ruf:b, 3ruh:A, 3ruh:B, 3ruh:C, 3ruh:D
32 4twr:A 325 326 0.2649 0.2738 0.2730 9.87e-14 4wok:A
33 1i3k:A 347 343 0.2500 0.2421 0.2449 1.14e-13 1ek5:A, 1ek6:A, 1ek6:B, 1hzj:A, 1hzj:B, 1i3k:B, 1i3l:A, 1i3l:B, 1i3m:A, 1i3m:B, 1i3n:A, 1i3n:B
34 1z45:A 674 339 0.2589 0.1291 0.2566 2.29e-12
35 2pzm:A 316 316 0.2173 0.2310 0.2310 9.21e-12 2pzk:A, 2pzk:B, 2pzl:A, 2pzl:B, 2pzm:B
36 1ker:B 347 340 0.2560 0.2478 0.2529 1.34e-11 1kep:A, 1kep:B, 1ker:A, 1ket:A, 1ket:B, 1oc2:A, 1oc2:B
37 7k3p:A 329 298 0.2202 0.2249 0.2483 1.97e-11 7k3p:B
38 2q1w:A 300 269 0.2202 0.2467 0.2751 4.69e-11 2q1w:B, 2q1w:C
39 1orr:A 338 350 0.2470 0.2456 0.2371 1.72e-10 1orr:B, 1orr:C, 1orr:D
40 7kn1:A 336 339 0.2470 0.2470 0.2448 2.77e-10 7kn1:B
41 2c59:A 364 339 0.2173 0.2005 0.2153 3.04e-10 2c54:A, 2c54:B, 2c59:B, 2c5a:A, 2c5a:B, 2c5e:A, 2c5e:B, 8sg0:A, 8sg0:B, 8skb:A, 8skb:B, 8skb:C, 8skb:D
42 1gy8:C 370 360 0.2411 0.2189 0.2250 8.96e-10 2cnb:A, 2cnb:B, 2cnb:C, 2cnb:D, 1gy8:A, 1gy8:B, 1gy8:D
43 3enk:A 340 344 0.2321 0.2294 0.2267 1.16e-09 3enk:B
44 8v4h:B 342 335 0.2351 0.2310 0.2358 4.61e-09 8v4g:A, 8v4g:B, 8v4h:A
45 2pk3:A 309 322 0.2232 0.2427 0.2329 7.57e-09 2pk3:B
46 8ewu:B 354 361 0.2381 0.2260 0.2216 2.63e-08 8ewu:A
47 4lis:A 364 362 0.2440 0.2253 0.2265 3.24e-08 4lis:B, 4lis:C
48 3aw9:A 304 284 0.2054 0.2270 0.2430 4.45e-08 3aw9:B, 3aw9:C, 3icp:A, 3ko8:A
49 6x3b:A 300 257 0.1935 0.2167 0.2529 5.14e-08 6x3b:B, 6x3b:C, 6x3b:D
50 2x6t:G 308 264 0.1994 0.2175 0.2538 1.40e-07 1eq2:B, 1eq2:D, 1eq2:E, 1eq2:F, 1eq2:G, 1eq2:H, 1eq2:I, 1eq2:J, 2x6t:A, 2x6t:B, 2x6t:C, 2x6t:D, 2x6t:E, 2x6t:F, 2x6t:H, 2x6t:I, 2x6t:J, 2x86:A, 2x86:B, 2x86:C, 2x86:D, 2x86:E, 2x86:F, 2x86:G, 2x86:H, 2x86:I, 2x86:J, 2x86:K, 2x86:L, 2x86:M, 2x86:N, 2x86:O, 2x86:P, 2x86:Q, 2x86:R, 2x86:S, 2x86:T
51 3ehe:A 290 302 0.2143 0.2483 0.2384 1.85e-07 3ehe:B
52 1eq2:A 273 264 0.2024 0.2491 0.2576 2.06e-07 1eq2:C
53 3sxp:D 314 283 0.2292 0.2452 0.2721 1.15e-06 3sxp:A, 3sxp:B, 3sxp:C, 3sxp:E
54 4ej0:A 330 280 0.2024 0.2061 0.2429 6.84e-06 4ej0:B, 4ej0:C, 4ej0:D, 4ej0:E, 4ej0:F, 4ej0:G, 4ej0:H, 4ej0:I, 4ej0:J
55 3m2p:B 255 266 0.1905 0.2510 0.2406 2.35e-05
56 4m55:E 164 145 0.1101 0.2256 0.2552 4.86e-05
57 1bsv:A 317 333 0.2321 0.2461 0.2342 1.12e-04 1bws:A, 1e6u:A, 1e7q:A, 1e7r:A, 1e7s:A, 1fxs:A
58 8gjh:A 639 354 0.2381 0.1252 0.2260 8.80e-04 8gjh:B, 8gjh:C, 8gjh:D, 8gjh:E, 8gjh:F
59 5bju:A 340 283 0.2054 0.2029 0.2438 0.001 5bju:B, 5bjv:A, 5bjv:B, 5bjw:A, 5bjw:B, 5bjx:A, 5bjx:B, 5bjy:A, 5bjy:B
60 4b79:A 236 66 0.0685 0.0975 0.3485 0.002 4b79:B
61 3w1v:A 347 257 0.1548 0.1499 0.2023 0.002 4g5h:A, 3vvc:A, 3w1v:B
62 6h0n:A 377 353 0.2113 0.1883 0.2011 0.004 6h0n:B, 6h0p:A, 6h0p:B
63 4j2o:C 316 259 0.1488 0.1582 0.1931 0.006 4j2o:A, 4j2o:B, 4j2o:D, 4j2o:E, 4j2o:F
64 1wvg:A 352 198 0.1488 0.1420 0.2525 0.007 1wvg:B
65 8du0:A 286 176 0.1280 0.1503 0.2443 0.010 7ll6:A
66 7us5:A 346 195 0.1310 0.1272 0.2256 0.010 7us5:B, 7us5:C, 7us5:D
67 4id9:B 328 201 0.1488 0.1524 0.2488 0.011 4id9:A, 4idg:A, 4idg:B
68 5z75:A 306 208 0.1310 0.1438 0.2115 0.014 5z75:B, 5z75:D
69 1rkx:C 351 217 0.1548 0.1481 0.2396 0.015 1rkx:A, 1rkx:B, 1rkx:D
70 2z1m:A 338 268 0.1667 0.1657 0.2090 0.033 2z1m:D, 2z95:A, 2z95:D
71 7cgv:A 310 233 0.1607 0.1742 0.2318 0.036 7cgv:B, 7cgv:C, 7cgv:D
72 1z7e:D 644 283 0.1935 0.1009 0.2297 0.041 2bln:A, 2bln:B, 5j63:A, 5j63:B, 5j63:C, 5j63:D, 1z7e:A, 1z7e:B, 1z7e:C, 1z7e:E, 1z7e:F
73 6vo6:D 311 33 0.0506 0.0547 0.5152 0.067 6vo6:A, 6vo6:B, 6vo6:C, 6vo8:A, 6vo8:B
74 7cxt:A 348 72 0.0655 0.0632 0.3056 0.081 7anc:A, 7cxt:B, 7m13:A, 7m13:B
75 3c1t:B 326 85 0.0893 0.0920 0.3529 0.18 3bxx:A, 3bxx:B, 3bxx:C, 3bxx:D, 3bxx:E, 3bxx:F, 3c1t:A, 3c1t:C, 3c1t:D, 2c29:D, 2c29:F, 2iod:A, 2iod:B, 2iod:C, 2iod:D, 2nnl:D, 2nnl:F
76 2hae:B 373 43 0.0595 0.0536 0.4651 0.48 2hae:A, 2hae:C, 2hae:D
77 3pvz:A 372 245 0.1667 0.1505 0.2286 0.83 3pvz:C, 3pvz:D
78 6jkh:A 212 80 0.0804 0.1274 0.3375 0.98 6jkh:B
79 8fem:A 327 26 0.0446 0.0459 0.5769 1.0 8fen:A
80 8gjb:A 320 186 0.1131 0.1187 0.2043 1.0 8gjb:B
81 6bwc:C 327 174 0.1250 0.1284 0.2414 1.1 6bwc:A, 6bwc:B, 6bwc:D, 6bwc:E, 6bwc:F
82 2nvu:B 789 35 0.0446 0.0190 0.4286 1.1 3dbh:B, 3dbh:D, 3dbh:F, 3dbh:H, 3dbl:B, 3dbl:D, 3dbl:F, 3dbl:H, 3dbr:B, 3dbr:D, 3dbr:F, 3dbr:H, 3gzn:B, 3gzn:D, 1r4m:F, 1r4m:H, 1r4n:B, 1r4n:D, 1r4n:F, 1r4n:H, 1tt5:B, 1tt5:D, 1yov:B, 1yov:D
83 7csa:A 310 133 0.1042 0.1129 0.2632 1.3 7csa:B, 7csa:C, 7csa:D, 7csb:C, 7csb:D, 7csb:A, 7csb:B, 7csc:E, 7csc:F, 7csc:A, 7csc:B, 7csc:C, 7csc:D, 7csd:C, 7csd:D, 7csd:A, 7csd:B, 7cse:E, 7cse:F, 7cse:A, 7cse:B, 7cse:C, 7cse:D, 7csf:C, 7csf:D, 7csf:A, 7csf:B
84 6d2v:A 315 335 0.2054 0.2190 0.2060 1.3 6d2v:B, 6nd7:A, 6nd7:B
85 3vvb:A 270 115 0.0714 0.0889 0.2087 1.4
86 1rpn:D 322 323 0.2113 0.2205 0.2198 1.7 1rpn:A, 1rpn:B, 1rpn:C
87 2hs3:A 602 86 0.0893 0.0498 0.3488 1.7 3d54:A, 3d54:E, 3d54:I, 2hs4:A
88 3pvz:B 300 105 0.0833 0.0933 0.2667 1.7
89 2hru:A 581 86 0.0893 0.0516 0.3488 1.8 2hry:A, 2hs0:A
90 4e5y:C 290 206 0.1458 0.1690 0.2379 2.1
91 4m55:F 181 129 0.1012 0.1878 0.2636 2.5
92 1pj6:A 828 34 0.0417 0.0169 0.4118 2.6 3gsi:A, 1pj5:A, 1pj7:A
93 1dfo:B 417 90 0.0923 0.0743 0.3444 2.7 1dfo:A, 1dfo:D, 1dfo:C, 1eqb:A, 1eqb:B, 1eqb:D, 1eqb:C, 3g8m:A
94 3st7:A 369 281 0.1935 0.1762 0.2313 2.7 2zkl:A
95 7cs6:F 300 127 0.1012 0.1133 0.2677 2.9 7cs3:A, 7cs3:B, 7cs3:C, 7cs3:D, 7cs3:E, 7cs3:F, 7cs4:E, 7cs4:A, 7cs4:F, 7cs4:D, 7cs4:C, 7cs4:B, 7cs5:E, 7cs5:A, 7cs5:F, 7cs5:D, 7cs5:C, 7cs5:B, 7cs6:A, 7cs6:B, 7cs6:C, 7cs6:D, 7cs6:E, 7cs7:A, 7cs7:B, 7cs7:C, 7cs7:D, 7cs7:E, 7cs7:F, 7cs8:A, 7cs8:B, 7cs8:C, 7cs8:D, 7cs8:E, 7cs8:F
96 8om2:B 342 87 0.0655 0.0643 0.2529 3.1 8d8k:B, 8d8l:B, 5mrc:BB, 5mre:BB, 5mrf:BB, 8om3:B, 8om4:B
97 8fet:A 334 21 0.0357 0.0359 0.5714 3.3 8fet:B, 8feu:A, 8feu:B, 8fev:A, 8fev:B, 8few:A, 8few:B
98 5ilg:A 265 31 0.0387 0.0491 0.4194 4.0 5ilg:B, 5ilo:A, 5ilo:B
99 7epr:B 310 191 0.1220 0.1323 0.2147 4.5 7epr:A, 7epr:C, 7epr:D
100 6jyg:D 307 184 0.1190 0.1303 0.2174 4.5 6jyg:A, 6jyg:B, 6jyg:C, 6jyg:E, 6jyg:F
101 1y1p:A 342 68 0.0685 0.0673 0.3382 4.6 1y1p:B
102 6ymd:A 420 50 0.0536 0.0429 0.3600 5.0 6ymd:B, 6ymf:A
103 1eg4:A 260 74 0.0506 0.0654 0.2297 5.2
104 7anc:B 314 191 0.1190 0.1274 0.2094 5.2
105 1yxm:B 283 25 0.0417 0.0495 0.5600 5.7
106 5tqm:A 315 92 0.0804 0.0857 0.2935 6.8 5tqm:B
107 8fip:A 338 21 0.0357 0.0355 0.5714 7.9 8fio:A, 8fio:B, 8fip:B
108 4imp:A 520 110 0.0744 0.0481 0.2273 7.9 4imp:B, 4imp:C, 4imp:D
109 3c3x:A 310 25 0.0268 0.0290 0.3600 8.9 3c3x:B, 2qw8:A, 2qw8:B, 2qx7:A, 2qx7:B, 2qzz:A, 2qzz:B, 2r2g:A, 2r2g:B, 2r6j:A, 2r6j:B
110 3nt6:A 565 113 0.0833 0.0496 0.2478 9.6 3nt6:B, 3nta:A, 3nta:B, 3ntd:A, 3ntd:B, 4ocg:A, 4ocg:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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