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BioLiP
>protein
MVNKQKVCPACESAELIYDPERGEIVCAKCGYVIEENIIDMGPEWRAFDA

The query sequence (length=50) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1pft:A 50 50 1.0000 1.0000 1.0000 2.89e-32
2 5iy7:M 310 41 0.3400 0.0548 0.4146 1.88e-07 1c9b:A, 1c9b:E, 1c9b:I, 1c9b:M, 1c9b:Q, 1dl6:A, 5iy8:M, 5iy9:M, 5iyb:M, 5iyc:M, 5iyd:M, 7nvu:M, 7nw0:M, 6o9l:M, 2phg:A, 1rly:A, 8s51:M, 8s52:M, 8s5n:M, 1vol:A, 8wak:R, 8wal:R, 8wan:R, 8wao:R, 8wap:R, 8waq:R, 8war:R, 8was:R, 7zwc:M, 7zx8:M, 7zxe:M
3 5iy6:M 260 39 0.3200 0.0615 0.4103 2.26e-06 8bvw:M, 8byq:M, 8bz1:M, 7edx:R, 7eg7:R, 7eg8:R, 7eg9:R, 7ega:R, 7egb:R, 7egc:R, 7ena:BA, 7enc:BA, 8gxq:BA, 8gxs:BA, 5iya:M, 7lbm:O, 7nvr:M, 7nvs:M, 7nvt:M, 7nvy:M, 7nvz:M, 7zwd:M, 7zx7:M
4 4v1n:M 299 47 0.3400 0.0569 0.3617 1.82e-05 4bbr:M, 4bbs:M, 4v1o:M
5 3k1f:M 185 47 0.3400 0.0919 0.3617 2.11e-04
6 8ity:V 361 34 0.2600 0.0360 0.3824 0.004 8iue:V, 8iuh:V, 5n9g:A, 5n9g:F, 4roc:A, 4rod:A, 4roe:A
7 8cen:M 310 39 0.2600 0.0419 0.3333 0.034 8ceo:M, 5fmf:P, 6gyk:M, 6gyl:M, 6gym:M, 7ml0:M, 7ml1:M, 7ml2:M, 7o4i:M, 7o4j:M, 7o72:M, 7o73:M, 7o75:M, 5oqj:M, 5oqm:M, 7zs9:M, 7zsa:M, 7zsb:M
8 7ml4:M 234 39 0.2600 0.0556 0.3333 0.078 5fyw:M, 5fz5:M
9 5g3z:A 215 28 0.2200 0.0512 0.3929 0.24 5g40:A, 5g41:A
10 8vlx:A 2431 23 0.2000 0.0041 0.4348 0.52
11 1h4s:A 473 28 0.3000 0.0317 0.5357 0.80 1h4q:A, 1h4q:B, 1h4s:B, 1h4t:A, 1h4t:B, 1h4t:C, 1h4t:D, 1hc7:A, 1hc7:B, 1hc7:C, 1hc7:D
12 3kzl:A 266 23 0.2000 0.0376 0.4348 1.1 3ijw:A, 3ijw:B, 3kzl:D, 3kzl:C, 3kzl:B, 3n0m:A, 3n0m:B, 3n0s:A, 3n0s:D, 3n0s:C, 3n0s:B, 3slb:A, 3slb:D, 3slb:C, 3slb:B, 3slf:A, 3slf:B
13 4bts:A6 80 27 0.1400 0.0875 0.2593 1.2 4bts:B6, 4bts:C6, 4bts:D6, 4v5o:A6, 4v5o:B6
14 6cnb:R 522 35 0.2600 0.0249 0.3714 1.3 8cen:O, 8ceo:O, 6cnc:R, 6cnd:R, 6cnf:R, 6eu0:Y, 6f40:U, 6f41:U, 6f42:U, 6f44:U, 8ffz:H, 5fmf:Q, 5fyw:O, 5fz5:O, 6gyk:O, 6gyl:O, 6gym:O, 7ml0:O, 7ml1:O, 7ml2:O, 7ml4:O, 1ngm:A, 1ngm:E, 1ngm:I, 1ngm:M, 1nh2:A, 7o4i:O, 7o4j:O, 7o72:O, 7o73:O, 7o75:O, 7oh9:K, 7oha:K, 7ohb:K, 5oqj:O, 5oqm:O, 7q5b:Y, 1rm1:A, 5sva:j, 4v1n:O, 4v1o:O, 1ytb:A, 1ytb:B, 1ytf:A, 7z7n:D, 7zb5:D, 7zb5:G, 7zs9:O, 7zsa:O, 7zsb:O
15 6o9l:Q 430 36 0.2400 0.0279 0.3333 1.4 8bvw:W, 8byq:W, 7eg9:U, 7ega:U, 7egb:U, 7egc:U, 7ena:EA, 7enc:EA, 5gpy:A, 8gxq:EA, 8gxs:EA, 5iy6:Q, 5iy8:Q, 5iy9:Q, 5iya:Q, 5iyb:Q, 5iyc:Q, 5iyd:Q, 7lbm:Q, 7nvr:W, 7nvs:W, 7nvt:W, 7nvu:W, 7nvy:W, 7nvz:W, 7nw0:W, 8s51:W, 8s52:W, 8s54:W, 8s55:W, 8s5n:W, 1vd4:A, 8wak:U, 8wal:U, 8wan:U, 8wao:U, 8wap:U, 8waq:U, 8war:U, 8was:U
16 6eu0:Z 339 35 0.2600 0.0383 0.3714 1.6 6f40:V, 6f41:V, 6f42:V, 6f44:V, 7q5b:Z
17 4v6w:Ab 84 27 0.1600 0.0952 0.2963 1.7 6xu6:Ab, 6xu7:Ab, 6xu8:Ab
18 3h0g:I 111 40 0.2600 0.1171 0.3250 2.8 3h0g:U
19 9bct:M 648 36 0.2800 0.0216 0.3889 2.9 9bct:J, 9bcu:J, 9bcu:M
20 6ee7:A 91 24 0.1600 0.0879 0.3333 3.2 1m1p:A, 1m1p:B, 1m1p:C, 1m1p:D, 1m1p:E, 1m1p:F, 1m1q:A, 1m1r:A
21 7cdl:C 573 18 0.2000 0.0175 0.5556 3.2 7cdl:D, 7cdl:A, 7cdl:B, 7cdl:G, 7cdl:H, 7cdl:M, 7cdl:N, 7ce5:A, 7ce5:B, 7ce5:C, 7ce5:D, 7ce5:G, 7ce5:H, 7ce5:M, 7ce5:N, 7ce9:A, 7ce9:B, 7ce9:C, 7ce9:D, 7ce9:G, 7ce9:H, 7ce9:M, 7ce9:N, 7cfx:C, 7cfx:D, 7cfx:A, 7cfx:B, 7cfx:G, 7cfx:H, 7cfx:M, 7cfx:N, 4tqo:B, 4tqo:A, 4tqo:C, 4tqo:D, 4tqo:E, 4tqo:F, 4tqo:G, 4tqo:H
22 5ein:C 54 30 0.2400 0.2222 0.4000 3.7 5eio:C, 3wwl:A, 3wwn:B
23 7lyt:A 712 13 0.1600 0.0112 0.6154 4.0 7lys:A, 7m5o:A
24 5g3y:A 213 31 0.2200 0.0516 0.3548 4.4
25 8ova:AW 85 27 0.1400 0.0824 0.2593 5.7 7ase:S, 5opt:S, 8ove:AW, 4v8m:AW
26 8hr5:A 466 32 0.1600 0.0172 0.2500 5.9
27 7sqc:1B 1660 25 0.1800 0.0054 0.3600 6.3
28 7sqc:1C 1700 25 0.1800 0.0053 0.3600 6.4 7sqc:1D
29 6d57:B 151 26 0.2200 0.0728 0.4231 6.6 6d57:A, 4ets:A, 4ets:B
30 6rvz:A 346 31 0.2000 0.0289 0.3226 6.9
31 6zj3:Sc 84 29 0.1400 0.0833 0.2414 8.3
32 2gqj:A 98 21 0.1600 0.0816 0.3810 9.5

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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