Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLLAEIGAVTLVSAPRPDSRHHS
LALTSFKRQQEESFQEQSALAAEARETRRQELLEKITEGQAAKKQKLEQASGASPRSALLVQLATARPRPVKARPLDWRV
QSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFAAHYIAQCWAPEDTIPLQDLVAAGRLGTSV
RKTLLLCSPQPDGKVVYTSLQWAS

The query sequence (length=264) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8hmy:B 264 264 1.0000 1.0000 1.0000 0.0 8hmz:B, 8iss:C
2 7uxa:A 230 264 0.8371 0.9609 0.8371 1.40e-148
3 7zrz:AP1 184 111 0.4167 0.5978 0.9910 9.16e-80
4 7zrz:AP1 184 74 0.2803 0.4022 1.0000 3.79e-42
5 2gjw:A 308 76 0.1061 0.0909 0.3684 4.31e-05 2gjw:B, 2gjw:C, 2gjw:D
6 8hmy:A 314 86 0.0909 0.0764 0.2791 0.25 8hmz:A
7 2dcm:A 662 75 0.0758 0.0302 0.2667 0.84 2eep:A, 2z3z:A
8 7zrz:BP4 104 85 0.0795 0.2019 0.2471 1.1
9 8iss:B 223 86 0.0871 0.1031 0.2674 1.4 7uxa:C
10 4r2b:A 395 92 0.0985 0.0658 0.2826 3.0 4r2b:B
11 1e93:A 476 84 0.0871 0.0483 0.2738 4.0 2cag:A, 2cah:A, 1h6n:A, 1h7k:A, 3hb6:A, 1m85:A, 1mqf:A, 1nm0:A
12 7vud:A 535 40 0.0530 0.0262 0.3500 7.5
13 7ypw:A 388 61 0.0720 0.0490 0.3115 7.9 7yr8:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218