BioLiP

>protein
MIVDGDLHIHSHYSKAVSKLMTFPIIAENAKLKGLNLVGTGDSLNPHWEKELLKHSKPIDDGTFEVNGVKFILTCEVEDK
RRVHHLLIFPTLSQVREFREKVKIYSTNIESEGRPNLNLTAEEIAEMANELDILIGPAHAFTPWTSLYKEYDSLKDAYGD
AKIDFLELGLSADSDMADMIKAHHSIPYLSNSNAHSPNPHRLGREFNRFEVKDVTFEEIRKAIKGVGGRKIMLNAGLDPR
LGKYHLTACSRCYTKYTLQDAVSLSWKCPKCGGIIKKGVRDRILELADTSEKPKDRPPYVRLAPLAEIIAMVLGKGIESK
AVKLLWNRFLREFGSEIRVLIDLPIESIASVHEGVAKAIWAYRNNKLIIVPGGGGKYGEIRIPEEILKAKIEDLN

The query sequence (length=395) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5zb8:A	400	395	0.9949	0.9825	0.9949	0.0	7k30:A, 7k31:A, 7k32:A, 7k33:A, 5zb8:B, 5zb8:C, 5zb8:D, 5zb8:E
2	6seh:C	252	91	0.0633	0.0992	0.2747	0.049	6seh:A
3	6sei:A	276	93	0.0658	0.0942	0.2796	0.13	6sei:C
4	5ol0:B	263	55	0.0456	0.0684	0.3273	0.30
5	5ol0:A	283	55	0.0456	0.0636	0.3273	0.30
6	6knb:B	1120	27	0.0354	0.0125	0.5185	1.3	6knc:B
7	6knb:B	1120	23	0.0228	0.0080	0.3913	2.9	6knc:B
8	4cc9:A	307	35	0.0354	0.0456	0.4000	2.6	9bhr:A, 9bhr:B, 9bhs:A, 9bhs:B, 9c1q:A, 8f8e:A, 8f8e:B, 8og5:A, 8og6:A, 8og7:A, 8og8:A, 8og9:A, 8oga:P, 8ogb:A, 8ogc:A, 8oo5:P, 8ood:A, 7sse:A, 7ufv:A, 7ufv:B
9	8d8j:d	660	69	0.0532	0.0318	0.3043	3.2	8d8k:d
10	5ijl:A	943	46	0.0380	0.0159	0.3261	3.8
11	8dvv:A	3886	30	0.0304	0.0031	0.4000	4.2	8dvv:B, 8dvv:C, 8dvv:D
12	8ppt:B	1191	46	0.0380	0.0126	0.3261	4.3	8ppu:B, 8ppv:B, 6t8h:B
13	5xs2:A	366	84	0.0557	0.0601	0.2619	5.6	5cei:A, 5hbe:A, 5icp:A, 5idp:A, 6r3s:A, 6t41:A, 6y0a:A
14	5olq:C	427	47	0.0304	0.0281	0.2553	6.3	5olq:A, 5olq:B, 5olr:A, 5olr:B, 5olr:C, 5ols:A
15	6rm3:SDD	67	48	0.0405	0.2388	0.3333	7.3
16	9bct:P	48	35	0.0278	0.2292	0.3143	9.0	9bcu:P, 4qiw:P, 4qiw:W

[Back]