Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MEHLYIVSYDIRNQRRWRRLFKTMHGFGCWLQLSVFQCRLDRIRIIKMEAAINEIVNHAEDHVLILDLGPAENVKPKVSS
IGKTFDPILRQ

The query sequence (length=91) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7mi4:E 95 91 1.0000 0.9579 1.0000 1.56e-65 7mi4:F, 7mi5:E, 7mi5:F, 7mi9:E, 7mi9:F, 7mib:F, 7mib:E, 7mid:C, 7mid:D
2 7cr8:M 93 66 0.2527 0.2473 0.3485 1.02e-08 7cr6:E, 7cr6:F, 7cr8:N, 7cr8:U, 7cr8:V, 7cr8:e, 7cr8:f, 7cr8:m, 7cr8:n, 7cr8:u, 7cr8:v, 7cr8:E, 7cr8:F
3 6p55:B 327 27 0.1429 0.0398 0.4815 0.070 6p52:A, 6p53:B, 6p54:A, 6p54:B, 6p55:A, 6xqv:A, 6xqv:B
4 8veq:A 325 27 0.1319 0.0369 0.4444 0.22 6vbd:A, 8ven:A, 8vep:A
5 6m9g:A 280 40 0.1209 0.0393 0.2750 1.4 6eg7:A, 6eg7:B, 6m9g:B
6 7ook:C 373 31 0.1429 0.0349 0.4194 3.5 7ook:B, 7ook:A
7 2j0f:A 446 73 0.2198 0.0448 0.2740 4.3 2j0f:B, 2j0f:C, 1uou:A, 2wk6:A, 2wk6:B
8 1v26:B 510 30 0.1538 0.0275 0.4667 4.6 1v25:A, 1v25:B, 1v26:A
9 4cej:A 1177 40 0.1429 0.0110 0.3250 6.2 4ceh:A, 4cei:A
10 7s6u:A 351 63 0.1978 0.0513 0.2857 6.7 7s6v:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218