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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
LYDPFMKIFFIPMDAFGHVNACIGLARMLSEFEHQCIFAVPKRWCKPIEEYNFKVEIVKDPTVPDDQDLQKKNGDFVNRY
SHTLSKTPREQFIELLIPSINRDIHYAKIIDGQIPTILESIDPDLIIIDFYVTLPSVVNSGKPWIHLTSCNPLNLYAGPN
VPPSCFGLSIDTDPDTVISYKQFIAESMKDVKSDFDEWLVSKGVKPEPFAISKSSPYLNVYSFPSDLDYSEFGPVPDKCF
RLDHMVRLVQEDPLGFDEKFFDRPGKKILFSLGSMGAADVELMKRLVGILGKSKHLFIVSKGLFHDKYELPENMIGAKFL
NQMAILPRVDLVIHHGGNNTFVESLYFGKPSIVLPLFGDQHDNGRRAEDKKIGRSFRPHHVTEDELLMAIDELLNDKELN
NRVLKIGENIRNSKSIDDFNKKIEEIIKVHK

The query sequence (length=431) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7lvy:A 431 431 1.0000 1.0000 1.0000 0.0 7mco:A, 7mco:B
2 8sft:B 428 434 0.3248 0.3271 0.3226 3.07e-59 8gkn:A, 8gkn:B, 8sft:A, 8sft:C, 8sft:D, 8sfu:A, 8sfu:B, 8sfw:A, 8sfy:A
3 7vlb:A 385 413 0.2135 0.2390 0.2228 3.98e-14
4 7vm0:B 406 120 0.0812 0.0862 0.2917 6.56e-12 8h5d:A, 8h5d:B, 7vm0:A
5 3oth:A 395 400 0.2065 0.2253 0.2225 3.99e-11 3otg:A, 3oth:B
6 7vlb:B 353 176 0.1114 0.1360 0.2727 5.51e-11
7 6kqx:A 327 161 0.1090 0.1437 0.2919 2.22e-10
8 6kqx:A 327 43 0.0278 0.0367 0.2791 5.8
9 5gl5:A 431 200 0.1137 0.1137 0.2450 1.16e-08 5gl5:B
10 6j31:B 387 277 0.1555 0.1731 0.2419 1.69e-08 6j31:A, 6j31:C, 6j31:D
11 4lei:A 375 254 0.1323 0.1520 0.2244 9.79e-08 4lei:B
12 6lfz:B 439 205 0.1230 0.1207 0.2585 2.37e-07 6lfz:A
13 7es1:A 408 64 0.0580 0.0613 0.3906 1.41e-06 7erx:A, 7es0:A, 7es2:A
14 2iya:A 392 204 0.0998 0.1097 0.2108 4.30e-06 2iya:B
15 6lg0:B 444 181 0.0928 0.0901 0.2210 7.62e-06 6lg0:A, 6lg0:C, 6lg0:D, 6lg0:E, 6lg0:F
16 7xx4:A 395 157 0.0974 0.1063 0.2675 1.25e-05 2iyf:A, 2iyf:B, 4m83:A, 4m83:B, 7xx4:B
17 5nlm:B 448 205 0.1230 0.1183 0.2585 1.32e-05
18 7bv3:A 457 211 0.1137 0.1072 0.2322 1.50e-05
19 4g2t:A 356 115 0.0626 0.0758 0.2348 1.83e-05
20 2c1z:A 439 91 0.0696 0.0683 0.3297 2.77e-05 2c1x:A, 2c9z:A
21 3rsc:A 397 79 0.0510 0.0554 0.2785 3.47e-05 3iaa:A, 3iaa:B, 3rsc:B
22 6su6:A 467 211 0.1253 0.1156 0.2559 6.93e-05 5nlm:A, 6su6:B, 6su7:A
23 7bv3:B 439 131 0.0789 0.0774 0.2595 8.80e-05
24 8wp5:A 479 192 0.1230 0.1106 0.2760 1.05e-04
25 7va8:A 456 122 0.0766 0.0724 0.2705 1.08e-04 7va8:B, 7vaa:A, 7vaa:B
26 3h4i:A 392 183 0.0882 0.0969 0.2077 2.40e-04 3h4t:A
27 8hoj:A 451 194 0.1206 0.1153 0.2680 2.83e-04 8hoj:B
28 7yp3:F 419 123 0.0626 0.0644 0.2195 3.90e-04 7yp3:B, 7yp3:C, 7yp3:D, 7yp3:E, 7yp5:A, 7yp5:B, 7yp6:A, 7yp6:B
29 8wvd:A 450 153 0.0928 0.0889 0.2614 5.30e-04 6l8z:A
30 3wag:B 401 47 0.0348 0.0374 0.3191 8.90e-04 3wad:A, 3wag:A
31 3ia7:A 397 190 0.0858 0.0932 0.1947 0.001 3ia7:B
32 4rel:A 446 107 0.0626 0.0605 0.2523 0.001 4rem:A, 4ren:A, 4whm:A
33 2acv:A 461 174 0.0951 0.0889 0.2356 0.002 2acv:B, 2acw:A, 2acw:B
34 6l5s:A 454 124 0.0789 0.0749 0.2742 0.002 6l5p:A, 6l5q:A, 6l5r:A, 6l7h:A
35 6lg1:A 429 151 0.0882 0.0886 0.2517 0.004 6lg1:B
36 8wrk:A 434 165 0.0928 0.0922 0.2424 0.004 8in7:A, 8ina:A, 8ind:A, 8inj:A, 8ino:A, 8inv:A, 8wrj:A
37 6llz:A 436 99 0.0557 0.0550 0.2424 0.008 7cyw:A, 6llw:A, 6llw:B, 6llz:B
38 6jem:A 440 187 0.1090 0.1068 0.2513 0.008 6jem:B, 6jem:C, 6jen:A, 6jen:B, 6jen:C
39 5u6n:B 448 190 0.0974 0.0938 0.2211 0.011 5u6m:A, 5u6m:B, 5u6n:A, 5u6s:A, 5u6s:B, 5v2j:A, 5v2j:B, 5v2k:A, 5v2k:B
40 8i0d:A 446 96 0.0650 0.0628 0.2917 0.013 8i0e:A
41 8w53:B 479 123 0.0696 0.0626 0.2439 0.013 8w53:A
42 8inh:B 454 197 0.1090 0.1035 0.2386 0.013 8inh:A
43 8cgq:A 458 45 0.0394 0.0371 0.3778 0.019 6lf6:A
44 8hjo:B 440 100 0.0626 0.0614 0.2700 0.022 8hjf:A, 8hjf:B, 8hjg:A, 8hjg:B, 8hjh:A, 8hjh:B, 8hjk:A, 8hjl:A, 8hjl:B, 8hjn:A, 8hjn:B, 8hjo:A, 8hjp:A, 8hjp:B, 8j66:A
45 7w11:A 435 165 0.0882 0.0874 0.2303 0.031
46 6inh:A 450 249 0.1462 0.1400 0.2530 0.035 6inf:A, 6ing:A, 6ini:A, 6kvi:A, 6kvj:A, 6kvk:A, 6kvl:A, 6o86:A, 6o87:A, 6o88:A
47 3tsa:B 372 104 0.0626 0.0726 0.2596 0.037 3uyk:B, 3uyl:A, 3uyl:B
48 8j2t:A 477 62 0.0510 0.0461 0.3548 0.20 8j2s:A, 8j2s:B, 8j2s:C, 8j2s:D, 8j2s:E, 8j2s:F, 8j2s:G, 8j2t:B, 8j2u:A, 8j2u:B, 8j2v:A, 9j9c:A, 9j9c:B, 9j9c:C, 9j9c:D, 9j9c:E, 9j9c:F, 9j9c:G, 9j9k:A, 9j9k:B
49 8w7y:A 474 80 0.0534 0.0485 0.2875 0.23
50 3hbj:A 445 119 0.0673 0.0652 0.2437 0.25 3hbf:A
51 6jtd:A 477 85 0.0580 0.0524 0.2941 0.26 6jtd:B
52 7zer:A 474 47 0.0371 0.0338 0.3404 0.29 7zf0:A
53 3oti:A 379 121 0.0650 0.0739 0.2314 0.54 3oti:B
54 7w0k:A 457 169 0.0905 0.0853 0.2308 1.2 7w0z:A, 7w10:A, 7w1b:A, 7w1h:A
55 3bk7:A 593 133 0.0673 0.0489 0.2180 1.2 3j15:B, 5lw7:B, 1yqt:A, 5yv5:A
56 7cpu:LT 160 53 0.0371 0.1000 0.3019 1.2 7a01:72, 8a3d:N, 5aj0:AT, 8b5l:T, 8b6c:T, 9bdl:AL21, 9bdn:AL21, 9bdp:AL21, 7bhp:LT, 8bhf:G1, 8bpo:S2, 8btk:BT, 7cpv:LT, 4d5y:T, 4d67:T, 6d90:T, 6d9j:T, 9f1b:BT, 9f1c:BT, 9f1d:BT, 7f5s:LT, 8fkp:LE, 8fkq:LE, 8fkr:LE, 8fks:LE, 8fkt:LE, 8fku:LE, 8fkv:LE, 8fkw:LE, 8fkx:LE, 8fky:LE, 8fkz:LE, 8fl0:LE, 8fl2:LE, 8fl3:LE, 8fl4:LE, 8fl6:LE, 8fl7:LE, 8fl9:LE, 8fla:LE, 8flb:LE, 8flc:LE, 8fld:LE, 8fle:LE, 8flf:LE, 6frk:T, 6ftg:T, 6fti:T, 6ftj:T, 8g5y:LT, 8g5z:LT, 8g60:LT, 8g61:LT, 8g6j:LT, 8glp:LT, 6gz3:AT, 6gz4:AT, 6gz5:AT, 6hcf:T3, 6hcj:T3, 6hcm:T3, 6hcq:T3, 8idt:c, 8idy:c, 8ie3:c, 8ifd:2N, 8ife:2N, 8ine:c, 8inf:c, 8ink:T, 6ip5:2N, 6ip6:2N, 6ip8:2N, 8ipd:T, 8ipx:T, 8ipy:T, 8ir1:c, 8ir3:c, 3j7o:T, 3j7p:T, 3j7q:T, 3j7r:T, 3j92:T, 3jag:T, 3jah:T, 3jai:T, 3jaj:T, 3jan:T, 8jdj:Y, 8jdk:Y, 8jdl:Y, 8jdm:Y, 8k2c:LT, 5lks:LT, 6lqm:c, 6lsr:c, 6lss:c, 7ls1:N2, 7ls2:N2, 6lu8:c, 5lzs:T, 5lzt:T, 5lzu:T, 5lzv:T, 5lzw:T, 5lzx:T, 5lzy:T, 5lzz:T, 7mdz:T, 6mtb:T, 6mtc:T, 6mtd:T, 6mte:T, 7nfx:T, 7nwg:T3, 7nwh:T, 7nwi:T, 7o7y:BT, 7o7z:BT, 7o80:BT, 7o81:BT, 7obr:T, 8ohd:LT, 8oj0:LT, 8oj5:LT, 8oj8:LT, 6ole:U, 6olf:U, 6olg:AT, 6oli:U, 6olz:AT, 6om0:U, 6om7:U, 7ow7:N, 7oyd:T, 8p2k:BT, 6p5i:AT, 6p5j:AT, 6p5k:AT, 6p5n:AT, 8q7z:BT, 8q87:BT, 8qfd:T, 7qgg:U, 8qoi:LT, 7qvp:LT, 7qvp:MT, 7qwq:T, 7qwr:T, 7qws:T, 6qzp:LT, 6r5q:T, 6r6g:T, 6r6p:T, 6r7q:T, 8rjb:T, 8rjc:T, 8rjd:T, 8scb:T, 6sgc:T2, 6swa:R, 5t2c:N, 6t59:T3, 7tm3:T, 7toq:AL21, 7tor:AL21, 7tut:T, 7ucj:T, 7uck:T, 4ug0:LT, 4ujc:BT, 4ujd:AT, 4uje:CT, 4v5z:Bq, 4v6x:CT, 6w6l:U, 6xa1:LT, 7xnx:LT, 7xny:LT, 8xsx:LT, 8xsy:LT, 8xsz:LT, 6y0g:LT, 8y0w:LT, 8y0x:LT, 6y2l:LT, 6y57:LT, 6y6x:LT, 8yoo:LT, 8yop:LT, 6z6l:LT, 6z6m:LT, 6z6n:LT, 7zjw:LW, 7zjx:LW, 6zm7:LT, 6zme:LT, 6zmi:LT, 6zmo:LT, 6zvk:72
57 7c2x:A 490 55 0.0510 0.0449 0.4000 1.3
58 4e2o:A 445 128 0.0719 0.0697 0.2422 1.8
59 7oyc:T1 157 51 0.0348 0.0955 0.2941 2.0
60 1rrv:A 401 41 0.0371 0.0399 0.3902 3.3 1rrv:B
61 4rif:B 379 78 0.0418 0.0475 0.2308 4.9 4rif:A, 4rih:A, 4rih:B, 4rii:B
62 3ang:C 201 82 0.0487 0.1045 0.2561 4.9 3ang:D, 3ang:A, 3ang:B, 3anp:C, 3anp:D, 3anp:A, 3anp:B
63 7cav:B 222 61 0.0487 0.0946 0.3443 5.3 7caq:A, 7caq:B, 7car:A, 7car:B, 7cas:B, 7cav:A, 7cav:C, 7cav:D, 7cav:E, 7cav:F, 7cav:G, 7cav:H, 7cc3:A, 7cc3:B, 7cc3:C, 7cc3:D, 7cc3:E, 7cc3:F, 7cc3:G, 7cc3:H
64 4rii:A 354 78 0.0418 0.0508 0.2308 5.5
65 7lhz:B 631 118 0.0626 0.0428 0.2288 6.8
66 5zb2:A 402 51 0.0278 0.0299 0.2353 7.1
67 5gk1:A 379 104 0.0580 0.0660 0.2404 7.5 5gk1:C
68 5eko:A 341 42 0.0325 0.0411 0.3333 7.6 5ekn:A, 4eyj:A, 4eym:A
69 1ny5:B 385 77 0.0557 0.0623 0.3117 9.7 4bs1:A, 4bs1:B, 4bt0:A, 4bt0:B, 4bt1:A, 4bt1:B, 4ly6:A, 4ly6:B, 4ly6:C, 4ly6:D, 4ly6:E, 4ly6:G, 4ly6:H, 4ly6:I, 4ly6:J, 4ly6:K, 4ly6:L, 4ly6:M, 4ly6:N, 4ly6:O, 4ly6:P, 4ly6:Q, 4ly6:R, 4ly6:S, 4ly6:T, 4ly6:U, 4ly6:V, 4ly6:W, 4ly6:X, 4lzz:A, 4lzz:B, 4lzz:C, 4lzz:D, 4lzz:E, 4lzz:F, 4lzz:G, 4lzz:H, 4lzz:I, 4lzz:J, 4lzz:K, 4lzz:L, 4lzz:M, 4lzz:N, 4lzz:O, 4lzz:P, 4lzz:Q, 4lzz:R, 4lzz:S, 4lzz:T, 4lzz:U, 4lzz:V, 4lzz:W, 4lzz:X, 3m0e:A, 3m0e:B, 3m0e:C, 3m0e:D, 3m0e:E, 3m0e:F, 3m0e:G, 1ny5:A, 1ny6:A, 1ny6:B, 1ny6:C, 1ny6:D, 1ny6:E, 1ny6:F, 1ny6:G, 1ny6:H, 1ny6:I, 1ny6:J, 1ny6:K, 1ny6:L, 1ny6:M, 1ny6:N, 1zy2:A
70 7oya:T1 157 51 0.0325 0.0892 0.2745 9.9 7oyb:T1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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