Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KTVGEALKGRRERLGMTLTELEQRTGIKREMLVHIENNEFDQLPNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQA
EW

The query sequence (length=82) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3fym:A 82 82 1.0000 1.0000 1.0000 2.03e-57
2 1b0n:A 103 80 0.2561 0.2039 0.2625 0.002 3zkc:A, 3zkc:B
3 8tac:B 66 62 0.2439 0.3030 0.3226 0.004
4 3cro:L 66 64 0.2561 0.3182 0.3281 0.063 3cro:R
5 7pd1:B 367 78 0.2683 0.0599 0.2821 0.19 7pd1:A, 7pd2:A, 7pd2:B
6 4yg1:A 72 36 0.1585 0.1806 0.3611 0.24 3dnv:B, 3hzi:B, 5k98:B, 5k98:P, 4yg1:B, 4yg1:C, 4yg1:D, 4yg4:A, 4yg4:B, 4yg4:D, 4yg7:B, 4yg7:E, 4yg7:C, 4yg7:G, 4z58:A, 4z59:A, 4z5c:A, 4z5c:B, 4z5d:A, 4z5d:B, 4z5h:A
7 8c8q:D 121 78 0.2683 0.1818 0.2821 0.71 8q1b:d
8 4a8f:B 664 64 0.2073 0.0256 0.2656 0.91 4a8f:A, 4a8f:C, 4a8k:B, 4a8k:A, 4a8k:C, 4a8m:Q, 4a8m:P, 4a8m:R, 4a8o:A, 4a8o:B, 4a8o:C, 4a8q:A, 4a8q:B, 4a8q:C, 4a8s:A, 4a8s:B, 4a8s:C, 4a8w:A, 4a8w:B, 4a8w:C, 4a8y:A, 4a8y:B, 4a8y:C, 4b02:A, 4b02:B, 4b02:C, 5fj6:A, 5fj7:C, 1hhs:A, 1hhs:B, 1hhs:C, 1hht:P, 1hht:Q, 1hht:R, 1hi0:P, 1hi0:Q, 1hi0:R, 1hi1:A, 1hi1:B, 1hi1:C, 1hi8:A, 1hi8:B, 2jlf:A, 2jlf:B, 2jlg:A, 2jlg:B, 2jlg:C, 1uvi:A, 1uvi:B, 1uvi:C, 1uvj:A, 1uvj:B, 1uvj:C, 1uvk:A, 1uvk:C, 1uvk:E, 1uvl:A, 1uvl:C, 1uvl:E, 1uvm:A, 1uvm:B, 1uvm:C, 1uvn:A, 1uvn:C, 1uvn:E
9 8dh6:d 121 52 0.2073 0.1405 0.3269 2.6 6hu9:d, 6hu9:p, 6t0b:d, 6t0b:q, 6t15:d, 6ymx:d, 6ymy:d, 7z10:d
10 8d49:A 1072 33 0.1341 0.0103 0.3333 3.2
11 1cr1:A 245 48 0.1829 0.0612 0.3125 3.3 1cr2:A, 1cr4:A
12 8d4a:A 1207 33 0.1341 0.0091 0.3333 3.4 8d4b:A
13 6bxt:A 265 63 0.2195 0.0679 0.2857 3.6 6bxt:B
14 6ke6:RP 2052 26 0.1220 0.0049 0.3846 3.6
15 7suk:SP 2234 26 0.1220 0.0045 0.3846 3.8 6zqb:UT
16 6lqs:RP 2180 26 0.1220 0.0046 0.3846 3.9 7d63:RP, 6lqp:RP, 6lqq:RP, 6lqr:RP, 6lqt:RP, 6lqu:RP, 6lqv:RP
17 2or1:L 63 67 0.1829 0.2381 0.2239 3.9 2or1:R, 1per:L, 1per:R, 1rpe:L, 1rpe:R
18 7aju:UT 2313 26 0.1220 0.0043 0.3846 4.0 7ajt:UT, 6zqc:UT, 6zqd:UT, 6zqe:UT
19 3kxa:A 131 64 0.1951 0.1221 0.2500 4.4 3kxa:B, 3kxa:C, 3kxa:D
20 1l9g:A 191 33 0.1951 0.0838 0.4848 5.0 1vk2:A
21 1nov:C 324 26 0.1585 0.0401 0.5000 5.1 1nov:A, 1nov:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417