Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK

The query sequence (length=53) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1le8:A 53 53 1.0000 1.0000 1.0000 4.33e-33 1akh:A, 1yrn:A
2 1nk2:P 77 42 0.3208 0.2208 0.4048 1.70e-06 1nk3:P
3 1ig7:A 58 42 0.3208 0.2931 0.4048 1.04e-05
4 1lfu:P 82 27 0.3396 0.2195 0.6667 2.89e-05 1b72:B, 1b8i:B, 4cyc:B, 1puf:B, 2r5y:B, 2r5z:B, 4uus:B, 4uus:F, 5zjq:B, 5zjr:B, 5zjs:B, 5zjt:B
5 4rdu:D 62 44 0.3396 0.2903 0.4091 3.23e-05 4rdu:A, 4xrs:I, 4xrs:G
6 3rkq:A 58 48 0.3208 0.2931 0.3542 4.56e-05 3rkq:B
7 1fjl:A 65 40 0.2830 0.2308 0.3750 1.10e-04 1fjl:B, 1fjl:C
8 5flv:M 229 48 0.3208 0.0742 0.3542 1.17e-04 5flv:A, 5flv:E, 5flv:I, 4s0h:A, 4s0h:B, 4s0h:E, 4s0h:F, 6wc2:N, 6wc2:M, 6wc2:O, 6wc5:I, 6wc5:N, 2x6u:A, 2x6v:A, 2x6v:B
9 3a01:F 61 38 0.2830 0.2459 0.3947 5.11e-04 3a01:B, 3lnq:A
10 3cmy:A 60 40 0.2830 0.2500 0.3750 5.65e-04
11 4egc:A 539 51 0.3019 0.0297 0.3137 0.001
12 4uus:A 67 42 0.2642 0.2090 0.3333 0.002 4uus:E
13 2lkx:A 68 49 0.3019 0.2353 0.3265 0.002
14 8pna:A 67 42 0.2453 0.1940 0.3095 0.002 8pm5:A, 8pm5:D, 8pm5:G, 8pm5:M, 8pm5:J, 8pm7:A, 8pm7:C, 8pm7:E, 8pm7:G, 8pmc:A, 8pmc:C, 8pmc:E, 8pmc:G, 8pmf:A, 8pmn:A, 8pmv:A, 8pmv:D, 8pmv:G, 8pmv:J, 8pn4:A, 8pn4:D, 8pn4:G, 8pn4:M, 8pn4:J, 8pnc:A, 8pnc:K, 8pnc:E, 8pnc:H
15 4rbo:A 55 38 0.2453 0.2364 0.3421 0.003 4rbo:D
16 1puf:A 77 42 0.3019 0.2078 0.3810 0.003 2lp0:A
17 3a01:A 78 42 0.2830 0.1923 0.3571 0.004 3a01:E
18 4xrm:B 64 27 0.2453 0.2031 0.4815 0.004 5bng:B, 5bng:A, 5eg0:A, 5ego:A, 8vts:B, 8vts:D, 8vtt:D, 4xrm:A, 4xrs:A, 4xrs:B
19 2r5z:A 75 42 0.2642 0.1867 0.3333 0.004 9ant:A, 9ant:B, 5jlw:A, 5jlw:D, 5jlx:A, 5jlx:D, 2r5y:A, 4xic:A, 4xic:D, 4xid:A, 4xid:D
20 4cyc:A 66 42 0.2642 0.2121 0.3333 0.004 1b8i:A
21 6es3:K 72 49 0.2642 0.1944 0.2857 0.004 6es2:K, 6es2:L, 6es3:M, 5lty:K, 5lty:M, 5lux:K, 5lux:L, 7q3o:K, 7q3o:C, 7q3o:E, 7q3o:G, 7q4n:K, 7q4n:C
22 1ahd:P 68 42 0.2642 0.2059 0.3333 0.004
23 1zq3:P 68 44 0.2830 0.2206 0.3409 0.006
24 2me6:A 71 42 0.2642 0.1972 0.3333 0.006
25 8osb:E 62 38 0.2453 0.2097 0.3421 0.008
26 3kxa:A 131 35 0.2453 0.0992 0.3714 0.009 3kxa:B, 3kxa:C, 3kxa:D
27 5wc9:A 136 53 0.3396 0.1324 0.3396 0.010 1au7:A, 1au7:B, 5wc9:B, 5wc9:E, 5wc9:F
28 8g8e:X 140 53 0.3019 0.1143 0.3019 0.012 8g87:X, 8g88:X, 8g8b:X, 8g8g:X, 8sps:M, 7u0g:K
29 5zjr:A 64 42 0.2642 0.2188 0.3333 0.013 5zjq:A, 5zjs:A, 5zjt:A, 5zjt:E
30 1gt0:C 137 53 0.3208 0.1241 0.3208 0.013 1cqt:A, 1cqt:B, 1e3o:C, 1hf0:A, 1hf0:B, 1o4x:A, 1oct:C
31 1b72:A 68 42 0.2642 0.2059 0.3333 0.017
32 3d1n:I 150 49 0.3208 0.1133 0.3469 0.021 3d1n:K, 3d1n:J, 3d1n:L, 3d1n:M, 3d1n:N, 3d1n:O, 3d1n:P
33 4qtr:C 57 53 0.2264 0.2105 0.2264 0.035 4qtr:A, 4qtr:B, 4qtr:D
34 3l1p:A 147 53 0.3019 0.1088 0.3019 0.052 8bx2:A, 6ht5:E, 3l1p:B, 8sps:L, 8spu:L, 6t90:K, 7u0g:M, 7u0g:L, 7u0i:L, 7u0i:M
35 6e8c:A 135 51 0.2264 0.0889 0.2353 0.056 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
36 6e8c:A 135 47 0.2642 0.1037 0.2979 0.85 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
37 8eml:A 58 42 0.2453 0.2241 0.3095 0.14 8eml:B
38 9b8u:B 66 36 0.2642 0.2121 0.3889 0.17 9b8u:A, 9b8u:C, 9b8u:D
39 1jgg:A 57 42 0.2264 0.2105 0.2857 0.24 1jgg:B
40 4j19:A 77 55 0.2830 0.1948 0.2727 0.31 4j19:B
41 8bx1:A 127 42 0.2453 0.1024 0.3095 0.59
42 2h1k:B 60 42 0.2264 0.2000 0.2857 0.93 2h1k:A
43 3a4w:A 301 28 0.2453 0.0432 0.4643 1.1 3a4w:B, 3a4x:A, 3a4x:B, 3afb:A, 3afb:B
44 8emt:B 1221 15 0.1698 0.0074 0.6000 1.2
45 2x77:A 181 43 0.2453 0.0718 0.3023 1.3 2x77:B
46 8emt:A 1254 15 0.1698 0.0072 0.6000 1.3
47 7orc:B 1299 15 0.1698 0.0069 0.6000 1.3 5epg:A, 7opn:A, 7opn:B, 7orc:A, 6q6q:A, 4uhw:A, 4uhx:A
48 6fqp:A 67 27 0.2075 0.1642 0.4074 1.8 6fqp:B, 6fqq:A, 6fqq:B, 6fqq:D, 6fqq:E
49 2hk6:A 309 26 0.2075 0.0356 0.4231 1.9 1c1h:A, 1c9e:A, 1ld3:A, 3m4z:A, 2q2n:A, 2q2o:A, 2q3j:A
50 5c1z:A 384 26 0.2264 0.0312 0.4615 2.3 4bm9:A, 5c1z:B, 5c23:A, 5c23:B, 5c9v:A, 6glc:A, 6hue:A, 6hue:B, 4i1f:A, 4i1h:A, 8ik6:C, 8ikm:A, 8ikt:A, 8ikv:C, 8ikv:A, 8jwv:A, 5n2w:A, 5n38:A, 8wzn:A, 8wzo:A
51 7xrc:C 134 52 0.2830 0.1119 0.2885 2.5 2xsd:C
52 8r8r:A 1188 25 0.1887 0.0084 0.4000 3.1
53 3lvq:E 420 33 0.1887 0.0238 0.3030 3.5 2b0o:E, 2b0o:F, 2b0o:G, 2b0o:H, 3lvr:E
54 2h8r:A 176 66 0.3019 0.0909 0.2424 4.7 2h8r:B
55 8pi9:B 177 66 0.3208 0.0960 0.2576 4.7 1ic8:A, 1ic8:B, 8pi7:A, 8pi7:B, 8pi8:A, 8pi8:B, 8pi9:A, 8pia:A, 8pia:B
56 8ik5:C 67 29 0.2075 0.1642 0.3793 4.8 8ike:C, 8ilw:C
57 6sg9:F4 541 17 0.1132 0.0111 0.3529 4.9 6sgb:F4
58 6nr7:A 1086 27 0.2264 0.0110 0.4444 5.1 4dj9:A, 4e17:A, 6fq4:A, 2gdc:A, 2gww:A, 2hsq:A, 2ibf:A, 5l0c:B, 5l0c:C, 5l0c:D, 5l0d:B, 5l0d:D, 5l0g:B, 5l0g:C, 5l0h:A, 4pr9:D, 4pr9:E, 4pr9:F, 3rf3:A, 3rf3:B, 1rkc:A, 3s90:A, 3s90:B, 1syq:A, 1t01:A, 3tj5:A, 3tj6:A, 1u6h:A, 1xwj:A, 1ydi:A, 3zdl:A, 1zvz:A, 1zw2:A, 1zw3:A
59 5hod:A 61 27 0.1698 0.1475 0.3333 5.3 5hod:D
60 6bbp:A 520 33 0.1887 0.0192 0.3030 9.0 2a5d:A, 2a5f:A, 2a5g:A, 6bbq:A, 1e0s:A, 1fgy:A, 1fhw:A, 1fhw:B, 1fhx:A, 1fhx:B, 4fme:C, 4fme:F, 2j5x:A, 2j5x:B, 4kax:A, 4kax:B, 3n5c:A, 3n5c:B, 3pcr:B, 2r09:A, 2r09:B, 2r0d:A, 2r0d:B, 3vhx:A, 3vhx:C, 3vhx:E, 3vhx:G, 2w83:A, 2w83:B, 2w83:E, 7xrd:A, 7xrd:B, 7xrd:C, 7xrd:D
61 2gk1:I 440 35 0.1887 0.0227 0.2857 9.5 2gk1:J, 2gk1:K, 2gk1:L

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218