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BioLiP
>protein
KSCCKSTLGRNCYNLCRARGAQKLCANVCRCKLTSGLSCPKDFPK

The query sequence (length=45) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1bhp:A 45 45 1.0000 1.0000 1.0000 1.49e-26
2 2plh:A 45 45 0.8889 0.8889 0.8889 1.36e-23
3 1wuw:A 45 45 0.8667 0.8667 0.8667 9.51e-23 1wuw:B
4 1okh:A 46 46 0.5556 0.5435 0.5435 1.28e-10 1okh:B
5 2v9b:A 46 46 0.4889 0.4783 0.4783 4.59e-09 2v9b:B
6 6tg9:G 148 33 0.2444 0.0743 0.3333 1.9 6tg9:C, 6tga:G, 6tga:C
7 3jd5:c 168 52 0.3333 0.0893 0.2885 2.2 6neq:c, 6nf8:c
8 5aj3:c 169 25 0.1778 0.0473 0.3200 8.9 5aj4:Ac, 6gaw:Ac, 6gaz:Ac, 7nqh:Ac, 7nql:Ac, 7nsi:Ac, 7nsj:Ac, 8oin:AT, 8oip:AT, 6ydp:Ac, 6ydw:Ac
9 7pnt:T 170 25 0.1778 0.0471 0.3200 9.0 7a5f:T6, 7a5g:T6, 7a5i:T6, 7a5k:T6, 8any:AT, 8csp:T, 8csq:T, 8csr:T, 8css:T, 8cst:T, 8csu:T, 3j9m:AT, 8k2a:Sa, 7l08:AT, 6nu2:AT, 6nu3:AT, 7og4:AT, 8oir:AT, 8ois:AT, 7p2e:T, 7pnu:T, 7pnv:T, 7pnw:T, 7pnx:T, 7pny:T, 7pnz:T, 7po0:T, 7po1:T, 7po2:T, 7po3:T, 7qi4:AT, 7qi5:AT, 7qi6:AT, 8qrk:T, 8qrl:T, 8qrm:T, 8qrn:T, 6rw4:T, 6rw5:T, 6vlz:AT, 6vmi:AT, 8xt0:Sa, 8xt2:Sa, 6zm5:AT, 6zm6:AT, 6zs9:AT, 6zsa:AT, 6zsb:AT, 6zsc:AT, 6zsd:AT, 6zse:AT, 6zsg:AT
10 7rpk:A 953 34 0.2667 0.0126 0.3529 9.2 7rph:A, 7rpi:A, 7rpj:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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