BioLiP

>protein
IRLVYTHAQTPDVSGVSMLEKIQQILPQIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVT
LAGACAGTAWAFSLLCTHSHQIAMFSKQLQDEIWLKDPDATASSSIAPFGKVEEVEGGIILNGDYGWSSGCDHAEYAIVG
FNRFDADGNKIYSFGVIPRSDYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPY
RPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYP
NKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGMEPDPTMV

The query sequence (length=400) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2jbs:D	400	400	1.0000	1.0000	1.0000	0.0	2jbs:A, 2jbs:B, 2jbs:C, 2jbt:A, 2jbt:D, 2jbt:B, 2jbt:C
2	2rfq:A	388	387	0.3100	0.3196	0.3204	5.70e-63	2rfq:B, 2rfq:C, 2rfq:D
3	5mr6:A	396	392	0.2500	0.2525	0.2551	4.83e-34	5lvw:A, 5mr6:D, 5mr6:B, 5mr6:C, 5mr6:E, 5mr6:H, 5mr6:F, 5mr6:G, 5mr6:I, 5mr6:L, 5mr6:J, 5mr6:K, 5mr6:M, 5mr6:P, 5mr6:N, 5mr6:O, 5mr6:Q, 5mr6:R, 5mr6:S, 5mr6:T, 5mr6:U, 5mr6:V, 5mr6:W, 5mr6:X
4	7f74:A	371	376	0.2350	0.2534	0.2500	2.86e-23	7f72:A, 7f74:B, 7f74:C, 7f74:D
5	5z8t:A	395	189	0.1325	0.1342	0.2804	2.13e-06	5z8t:B, 5z8t:C
6	4n5f:A	378	390	0.2175	0.2302	0.2231	0.004	4n5f:B
7	4m9a:B	376	384	0.2050	0.2181	0.2135	0.008	4m9a:A
8	2d29:A	386	134	0.0900	0.0933	0.2687	0.024	2d29:B
9	2pg0:A	380	125	0.0700	0.0737	0.2240	0.063	2pg0:B
10	4jic:A	370	79	0.0650	0.0703	0.3291	0.071	4jic:B, 4jic:C, 4jip:A, 4jiq:A, 5n6g:A
11	3mdd:A	385	390	0.2175	0.2260	0.2231	0.089	3mdd:B, 3mde:A, 3mde:B, 1udy:A, 1udy:B, 1udy:C, 1udy:D
12	8phe:A	551	228	0.1400	0.1016	0.2456	0.16	8phe:B, 8phf:A, 8phf:B
13	7p9a:A	380	380	0.1925	0.2026	0.2026	0.19	7p98:A, 7p98:B, 7p9a:B, 7p9x:A, 7p9x:B, 7p9x:C, 7p9x:D
14	1ukw:A	379	151	0.1050	0.1108	0.2781	0.30	1ukw:B
15	3nf4:A	369	151	0.0800	0.0867	0.2119	0.41	3nf4:B
16	2dvl:A	370	284	0.1725	0.1865	0.2430	0.44	2dvl:B
17	5lnx:D	374	148	0.0950	0.1016	0.2568	1.1	5lnx:A, 5lnx:B, 5lnx:C, 5lnx:E, 5lnx:F, 5lnx:G, 5lnx:H
18	4gqy:A	147	103	0.0700	0.1905	0.2718	1.9	4gqy:B, 4gqy:C, 4gqy:D
19	4kcf:A	407	219	0.1200	0.1179	0.2192	2.1	3m9v:A
20	4irn:A	378	122	0.0775	0.0820	0.2541	2.7	4irn:B, 4irn:C, 4irn:D, 4irn:E, 4irn:F, 4irn:G, 4irn:H
21	4hr3:A	407	72	0.0500	0.0491	0.2778	2.9
22	4iv6:B	383	88	0.0550	0.0574	0.2500	2.9	4iv6:A
23	1dck:B	125	31	0.0275	0.0880	0.3548	3.8	1dck:A, 1dcm:B
24	7w0j:E	382	214	0.1325	0.1387	0.2477	6.2	8i4p:A, 8i4r:A, 7w0j:B, 7w0j:C, 7w0j:H
25	2gje:A	145	92	0.0500	0.1379	0.2174	6.8
26	7pkq:i	154	56	0.0475	0.1234	0.3393	7.5

[Back]