Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GSSGSSGQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGPSSG

The query sequence (length=75) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1x4j:A 75 75 1.0000 1.0000 1.0000 7.49e-53
2 4v3k:C 75 64 0.8267 0.8267 0.9688 3.44e-44 7ojx:A, 4v3k:F, 4v3l:C
3 2ep4:A 74 82 0.4800 0.4865 0.4390 8.03e-15
4 5zbu:A 74 68 0.3600 0.3649 0.3971 1.93e-14 5zbu:D, 5zc4:A, 5zc4:D
5 7bvw:A 79 62 0.3200 0.3038 0.3871 4.59e-13 7bvw:B
6 6w7z:B 71 42 0.2933 0.3099 0.5238 8.87e-13 6w9a:B, 6w9a:D, 6w9d:B, 6w9d:E, 6w9d:H
7 2kiz:A 69 44 0.2933 0.3188 0.5000 2.03e-11 5lg0:A, 5lg7:A, 7p2k:A
8 2ecn:A 70 82 0.4533 0.4857 0.4146 7.46e-11 5xek:A
9 2ect:A 78 67 0.3600 0.3462 0.4030 8.15e-11
10 7r70:A 150 44 0.2800 0.1400 0.4773 9.82e-11 5d0i:A, 5d0i:B, 5d0k:C, 5d0k:F, 5d0k:I, 5d0k:L, 7r70:B, 7r71:A
11 1iym:A 55 43 0.2933 0.4000 0.5116 2.02e-10
12 5d0m:C 60 58 0.3067 0.3833 0.3966 1.62e-08 5ulh:C, 5ulk:C
13 6a3z:A 56 55 0.2533 0.3393 0.3455 7.87e-08
14 2l0b:A 91 68 0.2933 0.2418 0.3235 1.14e-07
15 2ecm:A 55 76 0.4000 0.5455 0.3947 1.92e-07
16 4lad:B 69 46 0.2533 0.2754 0.4130 5.53e-07
17 2lxh:C 58 42 0.2400 0.3103 0.4286 7.11e-07 2lxp:C
18 5ywr:B 87 55 0.2133 0.1839 0.2909 5.32e-06
19 6f98:A 78 60 0.2267 0.2179 0.2833 1.23e-05
20 2yuu:A 83 85 0.4133 0.3735 0.3647 4.84e-05
21 8aaf:e 1527 52 0.2267 0.0111 0.3269 1.25e-04 8agt:e, 8agu:e, 8agv:e, 8agw:e, 8agx:e, 8agz:e
22 1chc:A 68 27 0.1600 0.1765 0.4444 1.81e-04
23 1wes:A 71 83 0.4000 0.4225 0.3614 6.15e-04 2g6q:A
24 7oni:R 86 27 0.1733 0.1512 0.4815 0.001 2ecl:A, 6v9i:R
25 2ct2:A 88 70 0.3333 0.2841 0.3571 0.001 5fey:A, 5fey:B
26 4orh:H 142 28 0.1733 0.0915 0.4643 0.002 4ayc:A, 4ayc:B, 4orh:C, 4orh:G, 4orh:K, 4orh:L, 4whv:C, 4whv:D, 4whv:I, 4whv:J
27 5d1l:B 111 52 0.2267 0.1532 0.3269 0.002 5d1k:B, 5d1m:B
28 2lgv:A 100 22 0.1467 0.1100 0.5000 0.002 4a0c:D, 8b3g:R, 8b3i:R, 7b5l:R, 7b5m:R, 7b5n:R, 7b5s:R, 8cdk:R, 3dpl:R, 3dqv:R, 3dqv:Y, 4f52:B, 4f52:D, 8gq6:E, 8gq6:D, 8h33:D, 8h33:K, 8h33:L, 8h33:E, 8h34:R, 8h34:Q, 8h34:E, 8h34:D, 8h34:L, 8h34:K, 8h35:E, 8h35:D, 8h35:L, 8h35:K, 8h35:R, 8h35:Q, 8h35:W, 8h35:X, 8h36:E, 8h36:D, 8h37:E, 8h37:D, 8h37:R, 8h37:Q, 8h38:R, 8h3a:R, 8h3f:R, 8h3q:E, 8h3r:E, 8h3r:D, 2hye:D, 8jaq:R, 8jaq:V, 8jas:R, 8jas:V, 8jav:R, 8jav:V, 1ldj:B, 1ldk:C, 5n4w:R, 8or0:B, 8or2:B, 8or3:B, 4p5o:B, 4p5o:D, 7plo:T, 8pql:K, 8q7h:C, 8q7h:D, 8q7r:R, 8qu8:E, 8r5h:R, 6r7i:R, 6r7n:R, 8rhz:C, 8rhz:D, 3rtr:B, 3rtr:D, 3rtr:F, 3rtr:H, 8rwz:R, 8rx0:R, 6ttu:R, 1u6g:B, 8wqa:J, 8wqa:I, 8wqb:I, 8wqb:E, 8wqc:F, 8wqc:J, 8wqe:J, 8wqe:I, 8wqf:I, 8wqf:E, 8wqg:F, 8wqg:J, 8wqh:J, 8wqh:B, 7z8b:R, 7z8r:R, 7z8t:R, 7z8v:R, 7zbz:R
29 4a0c:F 80 41 0.2000 0.1875 0.3659 0.002 8ij1:R, 7shk:R
30 7ynx:A 188 42 0.2267 0.0904 0.4048 0.003 2jrj:A, 7ynx:B
31 8adl:A 633 47 0.1867 0.0221 0.2979 0.004 8adl:I
32 7t92:C 317 50 0.1600 0.0379 0.2400 0.005
33 2ecj:A 58 69 0.3200 0.4138 0.3478 0.005
34 7zj3:A 86 49 0.2000 0.1744 0.3061 0.032 8a38:A, 8a38:B, 8a38:C, 8ams:C, 8ams:D, 7zj3:D, 7zj3:G, 7zj3:J
35 1wem:A 76 84 0.3867 0.3816 0.3452 0.055 4l7x:A, 2m3h:A
36 5ait:A 129 59 0.2400 0.1395 0.3051 0.062 5aiu:A, 4ap4:A, 3ng2:A, 3ng2:B, 4ppe:A, 4ppe:B, 2xeu:A
37 5ait:A 129 46 0.2000 0.1163 0.3261 0.70 5aiu:A, 4ap4:A, 3ng2:A, 3ng2:B, 4ppe:A, 4ppe:B, 2xeu:A
38 5a31:B 84 29 0.1733 0.1548 0.4483 0.071 5g04:B, 5g05:B, 9gaw:C, 5jg6:A, 5jg6:D, 2mt5:A, 7qe7:C, 4r2y:A, 4r2y:B, 4r2y:C, 4r2y:D, 8s4g:C, 6tm5:B, 6tnt:B, 4ui9:B
39 3j92:0 36 26 0.1467 0.3056 0.4231 0.11
40 2d8t:A 71 82 0.3600 0.3803 0.3293 0.12
41 1wew:A 78 86 0.4000 0.3846 0.3488 0.14
42 6wi7:A 206 26 0.1200 0.0437 0.3462 0.33 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
43 8a3t:U 114 41 0.2000 0.1316 0.3659 0.34 8a5y:U
44 2ea6:A 69 46 0.2000 0.2174 0.3261 0.38
45 5iji:A 227 38 0.1733 0.0573 0.3421 0.45 5jef:A, 5jef:B, 5jgp:A
46 8adl:B 801 23 0.1200 0.0112 0.3913 0.63 8adl:G, 8adl:O, 8adl:J
47 7oik:A 4426 29 0.1467 0.0025 0.3793 0.65 7oim:A, 6tax:A, 6tay:A
48 5o6c:A 252 58 0.2267 0.0675 0.2931 0.67 6t7f:A
49 5din:B 124 59 0.2267 0.1371 0.2881 0.74 5din:A
50 6qmu:A 184 48 0.2000 0.0815 0.3125 1.1 3by0:A, 3by0:B, 3by0:C, 3cbc:A, 3cbc:B, 3cbc:C, 3cmp:A, 3cmp:B, 3cmp:C, 1dfv:A, 1dfv:B, 3fw4:A, 3fw4:C, 3fw5:A, 3fw5:B, 3fw5:C, 3hwe:A, 3hwe:B, 3hwe:C, 3hwf:A, 3hwf:B, 3hwf:C, 3hwg:A, 3hwg:B, 3hwg:C, 3i0a:A, 3i0a:B, 3i0a:C, 4k19:A, 4k19:B, 4k19:C, 3k3l:A, 3k3l:C, 5khp:A, 5khp:B, 5khp:C, 5kic:A, 5kic:B, 5kic:C, 5kid:A, 5kid:B, 5kid:C, 1l6m:A, 1l6m:B, 1l6m:C, 4mvi:A, 4mvk:A, 4mvl:A, 4mvl:B, 4mvl:C, 4mvl:D, 3pec:C, 3ped:A, 3ped:B, 3ped:C, 6qmu:B, 3t1d:A, 3t1d:B, 3t1d:C, 3tf6:A, 3tf6:B, 3tf6:C, 3tzs:A, 3tzs:B, 3tzs:C, 3u0d:A, 3u0d:B, 3u0d:C, 3u0d:D, 8uyn:A, 8uyn:B, 8uyn:C, 8uz9:A, 8uz9:B, 8uz9:C, 1x71:A, 1x71:B, 1x71:C, 1x89:A, 1x89:B, 1x89:C, 1x8u:A, 1x8u:B, 1x8u:C, 4zfx:A, 4zfx:C, 4zhc:A, 4zhc:B, 4zhc:C, 4zhd:A, 4zhd:B, 4zhd:C, 4zhf:A, 4zhf:B, 4zhf:C, 4zhf:D, 4zhf:E, 4zhf:F, 4zhg:A, 4zhg:B, 4zhg:C, 4zhg:D, 4zhg:E, 4zhg:F, 4zhh:A, 4zhh:B, 4zhh:C, 4zhh:D, 4zhh:E, 4zhh:F
51 8i3x:A 60 28 0.1600 0.2000 0.4286 1.7 8i3x:B
52 7ane:aa 1514 37 0.1867 0.0092 0.3784 1.8
53 1weq:A 85 87 0.3600 0.3176 0.3103 2.1
54 2y43:A 88 35 0.1467 0.1250 0.3143 2.1 2y43:B
55 1v87:A 114 97 0.3200 0.2105 0.2474 2.2
56 2qua:A 615 23 0.1333 0.0163 0.4348 2.5 2qub:A, 2qub:C, 2qub:E, 2qub:G, 2qub:I, 2qub:K
57 5zi6:A 55 44 0.2000 0.2727 0.3409 2.8 5zi6:B, 5zi6:C, 5zi6:D, 5zi6:E, 5zi6:F, 5zi6:G, 5zi6:H
58 2enn:A 77 71 0.2933 0.2857 0.3099 4.3
59 9atn:A 98 47 0.2000 0.1531 0.3191 4.8
60 8r5h:C 203 27 0.1333 0.0493 0.3704 5.5 6nyo:A, 8pql:C, 8q7r:C
61 2yql:A 56 59 0.2667 0.3571 0.3390 5.9
62 7z36:B 446 42 0.1600 0.0269 0.2857 6.4 6h3a:A, 6h3a:F, 6qaj:A, 6qaj:B, 6qu1:A, 2yvr:A, 2yvr:B, 7z36:A
63 7r04:A 2326 16 0.1200 0.0039 0.5625 6.8
64 1weu:A 91 30 0.1867 0.1538 0.4667 8.4 3c6w:A, 3c6w:C, 2k1j:A, 2m1r:A, 2pnx:A, 2pnx:C, 2vnf:A, 2vnf:C, 1wen:A
65 6k2k:A 57 47 0.2133 0.2807 0.3404 8.5 6m2c:E, 6m2c:F, 6m2c:G, 6m2c:H, 6m2d:A, 6m2d:B, 6m2d:C, 6m2d:D, 6m2d:E, 6m2d:F
66 1we9:A 64 38 0.2133 0.2500 0.4211 9.3

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417