BioLiP

>protein
GGLPSLKSSFVLSEDTTVKTLLPYGSVINYYGYVKPGQAPDGLVDGNKKAYYLYVWIPAVIAEMGVRMISPTGEIGEPGD
GDLVSDAFKAATPEEKSMPHWFDTWIRVERMSAIMPDQIAKAAKAKPVQKDDGDDTYKEERHNKYNSLTRIKIPNPPKSF
DDLKNIDTKKLLVRGLYRISFTTYKPGEVKGSFVASVGLLFPPGIPGVSPLIHSNPEELQKQAIAAEESLK

The query sequence (length=231) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2wfk:A	255	241	0.9913	0.8980	0.9502	2.60e-164	3frl:A, 3frl:B, 2wfk:B, 2wfk:C, 2wfk:D, 2wfk:E
2	5n6n:C	698	71	0.0866	0.0287	0.2817	2.1	5m4a:A
3	3sqg:A	578	32	0.0563	0.0225	0.4062	2.7	3sqg:D, 3sqg:G
4	3wog:B	243	53	0.0649	0.0617	0.2830	2.9	5ava:A, 5ava:B, 5ava:C, 5ava:D, 5ava:E, 5ava:F, 5ava:G, 5ava:H, 3wcs:A, 3wcs:B, 3wog:A
5	3gg2:A	431	24	0.0563	0.0302	0.5417	4.2	3gg2:D, 3gg2:B, 3gg2:C
6	5cio:A	770	28	0.0563	0.0169	0.4643	6.0	5cio:B
7	5dqz:B	301	80	0.0996	0.0764	0.2875	8.4	5dlj:D, 5dlj:A, 5dlj:B, 5dlj:C, 5dqt:D, 5dqt:C, 5dqt:A, 5dqt:B, 5dqt:K, 5dqt:L, 5dqt:I, 5dqt:J, 5dqu:A, 5dqu:D, 5dqu:C, 5dqu:B, 5dqz:D, 5dqz:C, 5dqz:A, 5ds4:A, 5ds4:C, 5ds4:D, 5ds4:B, 5ds5:A, 5ds5:C, 5ds5:D, 5ds5:B, 5ds6:A, 5ds6:C, 5ds6:D, 5ds6:B, 3nke:C, 5vvj:A, 5vvj:B, 5vvj:C, 5vvj:D, 5vvk:C, 5vvk:D, 5vvk:A, 5vvk:B, 5vvl:C, 5vvl:D, 5vvl:A, 5vvl:B, 5wfe:A, 5wfe:B, 5wfe:C, 5wfe:D
8	8tr2:A	745	50	0.0736	0.0228	0.3400	8.8	2e4u:A, 2e4u:B, 2e4v:A, 2e4v:B, 2e4w:A, 2e4w:B, 2e4x:A, 2e4x:B, 2e4y:A, 2e4y:B, 8tqb:A, 8tqb:B, 8tr0:B, 8tr2:B, 8trc:A, 8trc:B, 8trd:A, 8trd:B, 7wi6:A, 7wi6:B, 7wi8:A, 7wi8:B
9	1p1m:A	404	67	0.0736	0.0421	0.2537	9.6	2plm:A

[Back]