BioLiP

>protein
GDNEWHKLVIPKGSDWQIDLKAEGKLIVKVNSGIVEIFGTELAVDDEYTFQNWKFPIYAVEETELLWKCPDLTTNTITVK
PNHTMKYIYNLHFMLEKIRMSNFEGPRVVIVGGSQTRKTSLSRTLCSYALKFNAYQPLYINLDPQQPIFTVPGCISATPI
SDILDAQLPTWGQSLTSGATLLHNKQPMVKNFGLERINENKDLYLECISQLGQVVGQRLHLDPQVRRSGCIVDTPSISQL
DENLAELHHIIEKLNVNIMLVLCSETDPLWEKVKKTFGPELGNNNIFFIPKLVDDVYKRSLQRTSIREYFYGSLDTALSP
YAIGVDYEDLTIWKPSNVFDNEVGRVELFPVTITPSNLQHAIIAITFAERRADQATVIKSPILGFALITEVNEKRRKLRV
LLPVPGRLPSKAMILTSYRYLE

The query sequence (length=422) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4c0b:B	430	427	0.9976	0.9791	0.9859	0.0	4c0b:A, 4c0h:A, 2npi:A, 2npi:B, 4oi4:A, 4oi4:C
2	4ohw:A	399	436	0.2417	0.2556	0.2339	8.79e-31	4ohv:A, 4ohx:A, 4ohy:A, 4ohz:A, 4oi0:A, 4oi1:A, 4oi2:A
3	2ood:A	463	57	0.0427	0.0389	0.3158	0.94
4	4v9f:J	144	42	0.0308	0.0903	0.3095	2.2	3cc2:J, 3cc4:J, 3cc7:J, 3cce:J, 3ccj:J, 3ccl:J, 3ccm:J, 3ccq:J, 3ccr:J, 3ccs:J, 3ccu:J, 3ccv:J, 3cd6:J, 3cma:J, 3cme:J, 3cpw:I, 3cxc:I, 1ffk:G, 3g4s:J, 3g6e:J, 3g71:J, 3i55:J, 3i56:J, 1jj2:I, 1k73:K, 1k8a:K, 1k9m:K, 1kc8:K, 1kd1:K, 1kqs:I, 1m1k:K, 1m90:K, 1n8r:K, 1nji:K, 2otj:J, 2otl:J, 3ow2:I, 1q7y:K, 1q81:K, 1q82:K, 1q86:K, 2qa4:J, 2qex:J, 1qvf:I, 1qvg:I, 1s72:J, 4v4p:AM, 4v4r:BN, 4v4s:BN, 4v4t:BN, 1vq4:J, 1vq5:J, 1vq6:J, 1vq7:J, 1vq8:J, 1vq9:J, 1vqk:J, 1vql:J, 1vqm:J, 1vqn:J, 1vqo:J, 1vqp:J, 1w2b:I, 1yhq:J, 1yi2:J, 1yij:J, 1yit:J, 1yj9:J, 1yjn:J, 1yjw:J
5	6of2:B	528	60	0.0427	0.0341	0.3000	2.6	6of2:E, 6of3:B, 6of3:E
6	7pvi:AAA	199	102	0.0545	0.1156	0.2255	3.4	7pvi:BBB, 7pwb:AAA, 7pwb:BBB
7	9bts:a	154	97	0.0640	0.1753	0.2784	3.4	9bts:b, 9bts:c, 9bts:d, 9bts:e, 9bts:f, 9bts:g, 9bts:h
8	6fat:A	508	88	0.0616	0.0512	0.2955	4.5	8bhh:B, 8bhh:A, 6fat:B
9	3d1k:B	146	74	0.0474	0.1370	0.2703	4.8	4g51:B, 4g51:D, 3gkv:B, 3gqg:B, 3gqg:D, 2h8d:B, 2h8d:D, 2h8f:B, 2h8f:D, 1hbh:B, 1hbh:D, 4iro:B, 4iro:D, 1la6:B, 5lfg:B, 5lfg:D, 3nfe:B, 3nfe:D, 3ng6:B, 3ng6:D, 4odc:B, 1pbx:B, 2peg:B, 1s5x:B, 1s5y:B, 1s5y:D, 1t1n:B
10	5xhu:A	329	27	0.0332	0.0426	0.5185	4.8
11	3khu:B	467	37	0.0261	0.0236	0.2973	7.0	6c4j:A, 6c4j:B, 6c4j:C, 6c4j:D, 6c4j:E, 6c4j:F, 6c4j:G, 6c4j:H, 6c4j:I, 6c4j:J, 6c4j:K, 6c4j:L, 6c58:A, 6c58:B, 6c58:C, 6c58:D, 6c58:E, 6c58:F, 6c5a:A, 6c5a:B, 6c5a:C, 6c5a:D, 6c5a:E, 6c5a:F, 6c5z:A, 6c5z:B, 6c5z:C, 6c5z:D, 6c5z:E, 6c5z:F, 3khu:A, 3khu:C, 3khu:D, 3khu:E, 3khu:F, 3prj:A, 3prj:B, 3prj:C, 3prj:D, 3prj:E, 3prj:F, 3ptz:A, 3ptz:B, 3ptz:C, 3ptz:D, 3ptz:E, 3ptz:F, 2q3e:A, 2q3e:B, 2q3e:C, 2q3e:D, 2q3e:E, 2q3e:F, 2q3e:G, 2q3e:H, 2q3e:I, 2q3e:J, 2q3e:K, 2q3e:L, 2qg4:A, 2qg4:B, 2qg4:C, 2qg4:D, 2qg4:E, 2qg4:F, 2qg4:G, 2qg4:H, 3tdk:A, 3tdk:B, 3tdk:G, 3tdk:H, 3tdk:L, 3tdk:K, 3tdk:F, 3tdk:E, 3tdk:D, 3tdk:C, 3tdk:J, 3tdk:I, 5tjh:A, 5tjh:B, 5tjh:C, 5tjh:D, 5tjh:E, 5tjh:F, 5vr8:A, 5vr8:B, 5vr8:C, 5vr8:D, 5vr8:E, 5vr8:F

[Back]