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BioLiP
>protein
GASIFRCRQCGQTISRRDWLLEHVVFNPFRVWCFSLAQGLRLIGAPSGEFSWFKGYDWTIALCGQCGSHLGWHYEGGSQP
QTFFGLIKDRLAEGPA

The query sequence (length=96) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6r1a:A 112 106 1.0000 0.8571 0.9057 1.69e-63 5amh:A, 5ami:A, 5ami:B, 5amj:A, 5amj:B, 5amk:A, 5amk:B, 5amk:C, 5amk:D, 8aop:A, 8aop:B, 8aoq:A, 8aoq:B, 8bc6:A, 8bc6:B, 8bc7:B, 8bc7:A, 8bc7:C, 8c3h:A, 8c3h:B, 5oh1:A, 5oh1:B, 5oh1:C, 5oh2:A, 5oh2:B, 5oh2:C, 5oh3:A, 5oh3:B, 5oh4:A, 5oh4:B, 5oh4:C, 5oh7:A, 5oh7:B, 5oh8:A, 5oh8:B, 5oh9:A, 5oh9:B, 5oh9:C, 5oha:A, 5oha:B, 5oha:C, 5ohb:A, 5ohb:B, 5ohb:C, 8ou3:A, 8ou3:B, 8ou4:A, 8ou4:B, 8ou5:A, 8ou5:B, 8ou6:A, 8ou6:B, 8ou7:A, 8ou7:B, 8ou7:C, 8ou9:A, 8ou9:B, 8ou9:C, 8oua:A, 8oua:B, 8oua:C, 7pjk:A, 7pjk:B, 7ps9:A, 7ps9:B, 7pso:A, 7pso:B, 7pso:C, 6r0q:A, 6r0q:C, 6r0q:B, 6r0q:D, 6r0s:A, 6r0s:B, 6r0s:C, 6r0u:A, 6r0u:B, 6r0u:C, 6r0v:A, 6r0v:B, 6r0v:C, 6r11:A, 6r11:B, 6r11:C, 6r12:A, 6r12:B, 6r12:C, 6r13:A, 6r13:B, 6r18:C, 6r18:A, 6r18:B, 6r19:B, 6r19:A, 6r19:C, 6r1a:B, 6r1a:C, 6r1c:A, 6r1c:B, 6r1c:C, 6r1d:A, 6r1d:B, 6r1k:A, 6r1k:B, 6r1k:C, 6r1w:A, 6r1w:B, 6r1w:C, 6r1x:A, 6r1x:B, 8rdp:A, 8rdp:B, 8rdp:C, 8rdq:A, 8rdq:B, 8rdq:C, 8rdr:A, 8rdr:B, 8rdr:C, 8rds:A, 8rds:B, 8rdt:A, 8rdt:B, 8rdt:C, 7shh:A, 7shh:B, 7shh:C, 4v2y:A, 4v2y:B, 4v2y:C, 4v2z:A, 4v2z:B, 4v2z:C, 4v30:A, 4v30:B, 4v30:C, 4v31:A, 4v31:B, 4v31:C, 4v32:A, 4v32:B, 4v32:C
2 7ps9:C 90 96 0.9167 0.9778 0.9167 2.10e-57 8ou3:C, 8ou4:C, 8ou5:C
3 5oh7:C 82 96 0.8542 1.0000 0.8542 1.04e-50
4 6r1x:C 84 103 0.8021 0.9167 0.7476 1.47e-42 5ami:C, 6r13:C
5 5amj:C 69 96 0.6979 0.9710 0.6979 3.51e-35 8bc6:C, 8c3h:C, 5oh3:C, 8rds:C
6 8ou6:C 57 94 0.5938 1.0000 0.6064 5.90e-26 7pjk:C
7 8aop:C 53 96 0.5521 1.0000 0.5521 1.71e-21
8 9cuo:A 96 89 0.3646 0.3646 0.3933 1.86e-15 9cuo:B, 9cuo:C, 9cuo:D, 9cuo:E, 9cuo:F, 4tzc:C, 4tzc:A, 4tzu:A, 4tzu:B, 4tzu:C, 4tzu:D, 5yiz:J, 5yiz:M, 5yiz:P, 5yiz:S, 5yiz:V, 5yiz:Y, 5yiz:b, 5yiz:e, 5yiz:h, 5yiz:k, 5yiz:n, 5yiz:q, 5yj0:J, 5yj0:M, 5yj0:P, 5yj0:S, 5yj0:V, 5yj0:Y, 5yj0:b, 5yj0:e, 5yj0:h, 5yj0:k, 5yj0:n, 5yj0:q, 5yj1:J, 5yj1:M, 5yj1:P, 5yj1:S, 5yj1:V, 5yj1:Y, 5yj1:b, 5yj1:e, 5yj1:h, 5yj1:k, 5yj1:n, 5yj1:q
9 5oh8:C 46 96 0.4792 1.0000 0.4792 2.30e-14 8aoq:C
10 8rq9:A 316 102 0.3854 0.1171 0.3627 9.37e-14 8rq1:A, 8rq8:A, 8rq9:C, 8rqa:A, 8rqc:A, 8rqc:D
11 6h0g:B 401 58 0.2917 0.0698 0.4828 5.78e-13 6bn7:B, 6bn8:B, 6bn9:B, 6bnb:B, 6boy:B, 7bqu:A, 7bqv:A, 8cvp:B, 8d7u:B, 8d7v:B, 8d7w:B, 8d7x:B, 8d7y:B, 8d7z:B, 8d80:B, 8d81:B, 8dey:A, 8dey:D, 5fqd:B, 8g66:B, 6h0f:B, 6h0f:E, 6h0f:H, 6h0f:K, 6h0g:E, 5hxb:Z, 5hxb:C, 7lps:B, 7lps:E, 7lps:H, 7lps:K, 8oiz:B, 8ojh:B, 8tnp:B, 8tnq:B, 8tnr:B, 4tzc:B, 4tzc:D, 8tzx:A, 8tzx:D, 8u15:A, 8u15:D, 8u16:A, 8u16:D, 8u17:D, 7u8f:A, 7u8f:D, 8uh6:B, 5v3o:C, 3wx1:A, 3wx1:B, 3wx2:A, 3wx2:B, 6xk9:Z, 6xk9:C, 5yiz:A, 5yiz:D, 5yiz:G, 5yiz:t, 5yj0:A, 5yj0:D, 5yj0:G, 5yj0:t, 5yj1:A, 5yj1:D, 5yj1:G, 5yj1:t
12 5fqd:E 367 58 0.2917 0.0763 0.4828 7.62e-13 4tz4:C, 8u17:A, 6uml:C
13 8g66:E 303 58 0.2917 0.0924 0.4828 1.59e-12
14 4ci1:B 370 58 0.2917 0.0757 0.4828 2.82e-12 4ci2:B, 4ci3:B
15 2eq4:A 46 20 0.0833 0.1739 0.4000 1.0
16 6h0f:C 32 27 0.0938 0.2812 0.3333 1.8 6h0f:F, 6h0f:I, 6h0f:L
17 3cxk:A 131 34 0.1146 0.0840 0.3235 2.0 3cez:A, 3cez:B, 3cxk:B
18 2eoj:A 44 19 0.0833 0.1818 0.4211 2.2
19 2i13:A 151 23 0.1042 0.0662 0.4348 2.2
20 2i13:A 151 23 0.0938 0.0596 0.3913 6.8
21 2ytb:A 42 20 0.0833 0.1905 0.4000 2.5
22 2emc:A 46 23 0.0833 0.1739 0.3478 2.6
23 1x6h:A 86 22 0.0833 0.0930 0.3636 2.7
24 7l4l:A 412 32 0.1250 0.0291 0.3750 2.7 1b3n:A, 3g0y:A, 3g11:A, 2gfx:A, 3hnz:A, 3ho2:A, 3ho9:A, 3i8p:A, 7l4e:A, 7l4l:B, 6okg:A, 6olt:A
25 1mey:F 84 23 0.0938 0.1071 0.3913 2.7 1mey:C
26 5g3y:A 213 25 0.1250 0.0563 0.4800 3.0
27 6q9v:B 145 34 0.1250 0.0828 0.3529 3.0 6q9v:A, 6qa0:A, 6qa0:B
28 4rul:A 823 23 0.1250 0.0146 0.5217 3.2 1cy1:A, 1cy2:A, 1cy4:A, 1cy6:A, 1cy7:A, 1cy8:A, 1mw8:X, 3px7:A
29 2uvn:A 399 54 0.1979 0.0476 0.3519 3.3 2uuq:A, 2uvn:B, 2wgy:A, 2wh8:A, 2wh8:B, 2wh8:C, 2wh8:D, 2whf:A
30 2dlq:A 124 27 0.1146 0.0887 0.4074 3.6
31 2ma7:A 73 34 0.1146 0.1507 0.3235 3.9
32 2fe3:B 143 53 0.1667 0.1119 0.3019 4.1 3f8n:A, 3f8n:B, 2fe3:A, 2rgv:A, 2rgv:B
33 7w1m:H 322 19 0.0833 0.0248 0.4211 5.1 5k5h:A, 5k5i:A, 5k5j:A, 5k5l:E, 5k5l:G, 5k5l:F, 5kkq:A, 5kkq:D, 8ssq:A, 8ssq:D, 8ssr:A, 8ssr:D, 8sss:A, 8sss:D, 8sst:A, 8sst:D, 8ssu:A, 5t00:A, 5t00:D, 5t0u:A, 5t0u:D, 5und:A, 5und:B, 5yef:A, 5yef:B, 5yef:G, 5yef:J, 5yeg:A, 5yeg:B, 5yeh:A, 5yeh:B, 5yel:B, 5yel:A
34 2k8d:A 151 20 0.0833 0.0530 0.4000 5.5
35 2yta:A 41 23 0.0833 0.1951 0.3478 5.9
36 2i13:B 144 23 0.0938 0.0625 0.3913 6.0
37 2i13:B 144 19 0.0938 0.0625 0.4737 9.1
38 2yu5:A 44 19 0.0625 0.1364 0.3158 6.0
39 5ugr:A 323 61 0.2188 0.0650 0.3443 6.4
40 2i62:B 261 44 0.1354 0.0498 0.2955 6.5 2i62:A, 2i62:C, 2i62:D, 5xvk:A, 5xvk:B, 5yji:A, 5yji:B
41 1f2i:G 66 24 0.1042 0.1515 0.4167 9.0 1f2i:H, 1f2i:I, 1f2i:J, 1f2i:K, 1f2i:L
42 2ema:A 46 19 0.0729 0.1522 0.3684 9.1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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