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BioLiP
>protein
GAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLA

The query sequence (length=72) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 9bkr:A 74 72 1.0000 0.9730 1.0000 7.01e-50 9bks:A, 8tre:A, 7uw7:A
2 7mop:A 2445 62 0.3194 0.0094 0.3710 3.83e-10 6fyh:A, 6pfl:A, 6pfl:B, 8r7o:A, 8r7o:C, 8rd0:C, 8rd0:D, 8rd1:A, 8rd1:C, 8rd1:D, 8rd7:D, 6xz1:A
3 8r5n:A 165 58 0.3056 0.1333 0.3793 5.65e-08 8r5n:B, 8r6a:A, 8r6a:B, 8r6b:A
4 8r5n:A 165 71 0.3333 0.1455 0.3380 2.10e-06 8r5n:B, 8r6a:A, 8r6a:B, 8r6b:A
5 7kzh:A 182 70 0.2639 0.1044 0.2714 0.001 7tgq:A
6 1gpm:A 501 33 0.1667 0.0240 0.3636 3.0 1gpm:B, 1gpm:C, 1gpm:D
7 2d7i:A 536 38 0.1389 0.0187 0.2632 3.0 2d7r:A
8 3lnn:A 341 42 0.2083 0.0440 0.3571 4.3
9 6z1p:AN 96 40 0.1667 0.1250 0.3000 4.7
10 3ujk:A 298 28 0.1389 0.0336 0.3571 4.8 3nmv:B, 3ujl:B
11 7qzj:A 422 22 0.1528 0.0261 0.5000 6.1 7qzj:B
12 8wmi:A 1237 22 0.1250 0.0073 0.4091 7.7
13 8wm4:A 1331 22 0.1250 0.0068 0.4091 7.7
14 8wmc:A 1249 22 0.1250 0.0072 0.4091 7.7
15 7y9x:A 1458 22 0.1250 0.0062 0.4091 7.8 8gs2:A
16 7y9y:A 1482 22 0.1250 0.0061 0.4091 7.9 8wml:A
17 7wah:A 1473 22 0.1250 0.0061 0.4091 8.2
18 8d1v:A 1229 22 0.1250 0.0073 0.4091 8.2
19 8eex:A 1284 22 0.1250 0.0070 0.4091 8.2
20 7yn9:A 1514 22 0.1250 0.0059 0.4091 8.4
21 8eey:A 1544 22 0.1250 0.0058 0.4091 8.4 7yna:A, 7ynb:A, 7ync:A
22 7ynd:A 1567 22 0.1250 0.0057 0.4091 8.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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