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BioLiP
>protein
FIGSPTNLIMVTSTSLMLFAGFTLADTLACGVVGHIIGVGVVLGL

The query sequence (length=45) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 4xk8:k 46 46 1.0000 0.9783 0.9783 4.81e-23 4xk8:K
2 8j7a:K 56 52 0.9333 0.7500 0.8077 1.34e-19
3 7wfd:AK 65 60 0.9333 0.6462 0.7000 3.65e-18 7wfe:BK, 7wg5:AK, 7wg5:BK
4 4y28:K 57 55 0.8667 0.6842 0.7091 3.55e-17
5 8j6z:K 84 77 0.9333 0.5000 0.5455 4.63e-16 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
6 8wgh:K 83 77 0.8889 0.4819 0.5195 6.84e-16
7 8bcv:K 88 77 0.8222 0.4205 0.4805 2.74e-14 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
8 8htu:K 81 77 0.7778 0.4321 0.4545 8.94e-13 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
9 8cmo:K 89 79 0.7111 0.3596 0.4051 3.47e-07
10 6igz:K 80 77 0.6667 0.3750 0.3896 1.32e-05
11 6jo5:K 45 45 0.6222 0.6222 0.6222 1.75e-05 8h2u:K, 6jo6:K
12 7dz7:K 86 79 0.6667 0.3488 0.3797 1.38e-04 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
13 7a4p:K 86 26 0.3556 0.1860 0.6154 3.50e-04 6zzx:K, 6zzy:K
14 6kif:K 78 32 0.3778 0.2179 0.5312 4.61e-04 6kif:U, 6kif:m, 6kig:K, 6kig:U, 6kig:m
15 8wm6:K 69 38 0.4222 0.2754 0.5000 0.005 8wmj:K, 8wmv:K, 8wmw:K
16 6sl5:K 84 24 0.3333 0.1786 0.6250 0.016
17 6k61:k 78 31 0.3556 0.2051 0.5161 0.026 6jeo:aK, 6jeo:bK, 6jeo:cK, 6jeo:dK, 6k61:K, 6tcl:K1, 6tcl:K2
18 8cmo:G 93 19 0.2667 0.1290 0.6316 0.048
19 7dr2:aK 69 24 0.2889 0.1884 0.5417 0.051 7dr0:K, 7dr2:cK
20 8asp:k 77 31 0.3333 0.1948 0.4839 0.067 8am5:k, 8asl:k, 6nwa:K, 6nwa:k, 6nwa:T, 7umh:K, 7umh:T, 7umh:k
21 7y7b:K 78 27 0.2889 0.1667 0.4815 0.075 7y8a:K
22 7y5e:KN 70 25 0.2889 0.1857 0.5200 0.13 7y5e:K2, 7y7a:K7, 7y7a:Ko
23 6l35:G 98 19 0.2444 0.1122 0.5789 0.16 8htu:G, 7ksq:G, 7kux:G, 7xqp:G
24 7fix:K1 79 28 0.3111 0.1772 0.5000 0.21 7fix:K2, 7fix:K3, 6tra:K, 6trc:K, 6trc:k, 6trc:9, 6trd:K, 6trd:k, 6trd:9
25 6kmx:aK 46 26 0.2889 0.2826 0.5000 0.27 6kmx:bK, 6kmx:cK
26 7yca:G 95 19 0.2444 0.1158 0.5789 0.30
27 8wey:K 63 25 0.2889 0.2063 0.5200 0.35
28 5zji:G 97 18 0.2222 0.1031 0.5556 1.0
29 4l6v:K 80 24 0.2889 0.1625 0.5417 1.1 6hqb:K, 4l6v:k, 4l6v:0, 7o1v:K, 5oy0:K, 5oy0:k, 5oy0:8, 6uzv:K, 6uzv:k, 6uzv:8
30 8wgh:G 98 17 0.2000 0.0918 0.5294 1.1
31 6vpv:K 78 27 0.2889 0.1667 0.4815 1.2 6vpv:k, 6vpv:9
32 6tcl:K 60 18 0.2667 0.2000 0.6667 1.2 6tcl:KK
33 5zgb:K 59 22 0.2889 0.2203 0.5909 1.3 7blz:K, 6fos:K, 5zgh:K
34 7wg5:AG 99 17 0.2000 0.0909 0.5294 1.3 7dkz:G, 8j6z:G, 8j7a:G, 8j7b:G, 5l8r:G, 7wfd:AG, 7wfe:BG, 7wg5:BG, 6yac:G, 6yez:G, 6zoo:G, 6zxs:G
35 8bcv:G 94 17 0.2000 0.0957 0.5294 1.5
36 7qco:K 65 28 0.2444 0.1692 0.3929 1.8 7qco:R, 7qco:r, 7qco:k
37 4s13:A 472 34 0.3333 0.0318 0.4412 2.0 4s13:G
38 3lw5:G 95 18 0.1778 0.0842 0.4444 2.3 6igz:G, 2o01:G, 2wsc:G, 2wse:G, 2wsf:G, 4xk8:G, 4xk8:g
39 6evf:A 503 34 0.3333 0.0298 0.4412 2.8 6eve:A, 6eve:B, 6eve:C, 6eve:D, 6evf:B, 6evf:C, 6evf:D, 4s13:C, 4s13:F, 4zac:A, 4zac:B, 4zac:C, 4zac:D
40 3noy:B 351 37 0.2667 0.0342 0.3243 3.2 3noy:A, 3noy:C, 3noy:D
41 4kt0:K 53 27 0.3333 0.2830 0.5556 4.6
42 7a4p:G 99 16 0.2000 0.0909 0.5625 6.4 6zzx:G, 6zzy:G
43 6upc:A 246 28 0.2444 0.0447 0.3929 7.6 6upc:B, 6upd:A, 6upd:B, 6upe:A, 6upe:B
44 7zqc:G 80 23 0.2000 0.1125 0.3913 9.6 7bgi:G, 7blx:G, 6jo5:G, 6jo6:G

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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