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BioLiP
>protein
EPSPYVEFDRRQWRALRMSTPLALTEEELVGLRGLGEQIDLLEVEEVYLPLARLIHLQVAARQRLFAATAEFLGEPQQNP
DRPVPFIIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGFLYPNAELQRRNLMHRKGFPESYNRRALMRFVTSV
KSGSDYACAPVYSHLHYDIIPGAEQVVRHPDILILEGLNVLQTGPTLMVSDLFDFSLYVDARIEDIEQWYVSRFLAMRTT
AFADPESHFHHYAAFSDSQAVVAAREIWRTINRPNLVENILPTRPRATLVLRKDADHSINRLRLRKL

The query sequence (length=307) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2ges:A 308 307 1.0000 0.9968 1.0000 0.0 3aez:A, 3af0:A, 3af1:A, 3af2:A, 3af3:A, 3avo:A, 3avq:A, 4bfs:A, 4bft:A, 4bft:B, 4bfu:A, 4bfu:B, 4bfv:A, 4bfv:B, 4bfw:A, 4bfw:B, 4bfx:A, 4bfx:B, 4bfy:A, 4bfy:B, 4bfz:A, 4bfz:B, 2get:A, 2geu:A, 2gev:A, 2zs7:A, 2zs8:A, 2zs9:A, 2zsa:A, 2zsb:A, 2zsd:A, 2zse:A, 2zsf:A
2 1esm:A 311 311 0.5277 0.5209 0.5209 1.15e-114 1esm:B, 1esm:C, 1esm:D, 1esn:A, 1esn:B, 1esn:C, 1esn:D, 4f7w:A, 4f7w:C, 4f7w:B, 4f7w:D, 4f7w:E, 4f7w:F, 4f7w:G, 4f7w:H, 4gi7:A, 4gi7:C, 4gi7:B, 4gi7:D, 4gi7:E, 4gi7:F, 4gi7:G, 4gi7:H, 4ne2:A, 4ne2:B, 1sq5:A, 1sq5:B, 1sq5:C, 1sq5:D
3 3tqc:B 305 312 0.5179 0.5213 0.5096 6.26e-112 3tqc:A
4 6n55:E 214 220 0.1661 0.2383 0.2318 5.86e-06 6n53:A, 6n53:B, 6n54:A, 6n54:B, 6n55:D, 6n55:F, 6pwz:D, 6pwz:E, 6pwz:H, 7sql:A, 7sql:C, 7sql:B, 7sql:D, 1udw:A, 1udw:B, 1uei:A, 1uei:B, 1uej:A, 1uej:B, 1uj2:A, 1uj2:B, 1xrj:A, 1xrj:B
5 2uvq:A 211 144 0.1270 0.1848 0.2708 6.39e-06
6 3asz:B 208 157 0.1498 0.2212 0.2930 4.19e-05 3asz:A, 3w34:A, 3w34:B, 3w8r:A, 3w8r:B
7 2p0e:A 190 75 0.0684 0.1105 0.2800 0.001 2qg6:A, 2ql6:A, 2ql6:E, 2ql6:B, 2ql6:C, 2ql6:F, 2ql6:D, 2ql6:G, 2ql6:H, 2ql6:I, 2ql6:M, 2ql6:J, 2ql6:K, 2ql6:L, 2ql6:N, 2ql6:O, 2ql6:P, 2qsy:A, 2qsz:A, 2qt0:A, 2qt1:A
8 8gqm:A 377 153 0.1498 0.1220 0.3007 0.008
9 6kev:A 317 224 0.1889 0.1830 0.2589 0.014
10 6xji:C 290 80 0.0651 0.0690 0.2500 0.12 6xjh:C, 6xjh:D, 6xji:D
11 8sm7:A 347 141 0.1173 0.1037 0.2553 0.71 8sm7:B, 8sm7:D, 8sm7:G
12 6am3:X 135 46 0.0554 0.1259 0.3696 0.71 6am3:A
13 7yq0:A 173 85 0.0847 0.1503 0.3059 1.5 7yq0:B, 7yq1:A, 7yq1:B, 7yq1:C, 7yq1:D, 7yq1:E, 7yq1:F
14 1qzw:A 432 50 0.0619 0.0440 0.3800 2.0 3kl4:A, 5l3s:A, 5l3s:C, 5l3s:E, 5l3s:G, 5l3v:A, 5l3v:B, 1qzw:C, 1qzw:E, 1qzw:G, 3zn8:M
15 2www:D 314 61 0.0554 0.0541 0.2787 2.1 2www:A, 2www:B, 2www:C
16 2a2z:B 221 29 0.0358 0.0498 0.3793 2.4 2a2z:D, 2a30:B, 2a30:D, 3mjr:D, 2zi5:A, 2zi5:C, 2zi5:D, 2zi6:A, 2zi6:C, 2zi6:D, 2zi7:B, 2zi7:A, 2zia:A, 2zia:B
17 7d9x:A 336 49 0.0619 0.0565 0.3878 2.5 7d9x:C
18 6tbu:A 842 44 0.0521 0.0190 0.3636 4.5
19 6ui4:A 692 54 0.0554 0.0246 0.3148 4.6
20 7oro:A 2008 40 0.0391 0.0060 0.3000 5.6 7ori:A
21 6z6b:PPP 2036 40 0.0391 0.0059 0.3000 5.6 6z6b:EEE
22 6z6g:A 2142 40 0.0391 0.0056 0.3000 5.6 5amr:A
23 7orm:A 2145 40 0.0391 0.0056 0.3000 5.6
24 6z8k:A 2158 40 0.0391 0.0056 0.3000 5.6 5amq:A, 7orn:A
25 7orl:A 2183 40 0.0391 0.0055 0.3000 5.6 7oa4:AAA, 7oa4:BBB, 7oa4:DDD, 7oa4:GGG, 7ork:A, 7plr:AAA, 7plr:BBB, 7plr:DDD, 7plr:GGG, 2xi5:A, 2xi5:B, 2xi5:C, 2xi5:D, 2xi7:A, 2xi7:B, 2xi7:C, 2xi7:D
26 2no0:A 242 29 0.0358 0.0455 0.3793 5.7 2a2z:A, 2a2z:C, 2a30:A, 2a30:C, 2a7q:A, 3hp1:A, 3ipx:A, 3ipy:A, 3ipy:B, 4jlj:A, 4jlj:B, 4jlk:A, 4jlk:B, 4jlm:A, 4jlm:B, 4jln:A, 4jln:B, 4kcg:A, 4kcg:B, 3kfx:A, 3kfx:B, 4l5b:A, 4l5b:B, 3mjr:A, 3mjr:B, 3mjr:C, 5mqj:A, 5mqj:B, 5mqj:C, 5mqj:D, 5mql:A, 5mql:B, 5mql:C, 5mql:D, 5mqt:A, 5mqt:B, 5mqt:C, 5mqt:D, 2no0:B, 2no1:A, 2no1:B, 2no6:A, 2no6:B, 2no7:A, 2no7:B, 2no9:A, 2no9:B, 2noa:A, 2noa:B, 8ooj:A, 8ooj:B, 8ooj:C, 8ooj:D, 1p5z:B, 1p60:A, 1p60:B, 1p61:B, 1p62:B, 4q18:A, 4q18:B, 4q19:A, 4q19:B, 4q1a:A, 4q1a:B, 4q1b:A, 4q1b:B, 4q1c:A, 4q1c:B, 4q1d:A, 4q1d:B, 4q1e:A, 4q1e:B, 4q1f:A, 4q1f:B, 3qej:A, 3qej:B, 3qen:A, 3qen:B, 3qeo:A, 3qeo:B, 2qrn:A, 2qrn:B, 2qrn:C, 2qrn:D, 2qro:A, 2qro:B, 2qro:C, 2qro:D, 2zi3:A, 2zi3:B, 2zi4:A, 2zi5:B, 2zi6:B, 2zi9:A, 2zi9:B, 7zi1:A, 7zi2:A, 7zi3:A, 7zi5:A, 7zi6:A, 7zi7:A, 7zi8:A, 7zi9:A, 7zia:A, 7zib:A
27 7orj:A 2129 40 0.0391 0.0056 0.3000 5.7
28 3vc6:A 420 45 0.0586 0.0429 0.4000 6.4
29 8gju:F 332 44 0.0423 0.0392 0.2955 8.4 8gju:D, 8gju:A, 8gju:B
30 2yk0:A 698 49 0.0489 0.0215 0.3061 9.3 2xu0:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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