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BioLiP
>protein
EILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG

The query sequence (length=69) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8gui:K 72 69 1.0000 0.9583 1.0000 3.60e-47 8guj:K, 8iej:M, 5trb:A
2 8gui:L 73 69 0.8696 0.8219 0.8696 4.88e-41 8guj:L, 8iej:A
3 4r7e:A 69 68 0.3768 0.3768 0.3824 7.06e-14 8ieg:A, 8ieg:B, 8t3t:K, 8t3t:L, 8t3w:K, 8t3w:L, 8t3y:K, 8t3y:L
4 4r8p:L 254 48 0.2174 0.0591 0.3125 1.12e-04 2ckl:B, 8grm:N, 2h0d:B, 7nd1:A, 8pp7:L, 8pp7:N, 4r8p:N, 3rpg:C, 4s3o:B, 4s3o:E
5 2eci:A 86 68 0.3188 0.2558 0.3235 1.33e-04
6 6yxe:A 89 50 0.2464 0.1910 0.3400 4.29e-04 6yxe:B
7 1z6u:A 115 55 0.2319 0.1391 0.2909 5.32e-04 1z6u:B
8 7oik:A 4426 40 0.2174 0.0034 0.3750 7.67e-04 7oim:A, 6tax:A, 6tay:A
9 7t92:C 317 52 0.2609 0.0568 0.3462 0.003
10 5eya:G 86 59 0.2609 0.2093 0.3051 0.004 5eya:F, 5fer:A, 5fer:D
11 5ait:A 129 43 0.2319 0.1240 0.3721 0.004 5aiu:A, 4ap4:A, 3ng2:A, 3ng2:B, 4ppe:A, 4ppe:B, 2xeu:A
12 5ait:A 129 42 0.2174 0.1163 0.3571 0.033 5aiu:A, 4ap4:A, 3ng2:A, 3ng2:B, 4ppe:A, 4ppe:B, 2xeu:A
13 6wi7:A 206 48 0.2174 0.0728 0.3125 0.006 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
14 6wi7:A 206 52 0.2319 0.0777 0.3077 2.8 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
15 5vo0:D 159 48 0.2319 0.1006 0.3333 0.006 5vnz:A, 5vnz:D, 5vo0:A
16 7jzv:A 253 43 0.2319 0.0632 0.3721 0.008 8grq:K, 1jm7:A, 7lyb:M
17 2ecw:A 85 53 0.2319 0.1882 0.3019 0.010
18 3hcs:A 157 53 0.2464 0.1083 0.3208 0.011 3hcs:B, 3hct:A, 3hcu:A, 3hcu:C, 8hz2:A, 8hz2:B, 2jmd:A, 7l3l:B, 7l3l:D
19 4s3o:C 95 61 0.2319 0.1684 0.2623 0.012 4s3o:F
20 5j3x:B 389 39 0.1594 0.0283 0.2821 0.040 4a4b:A, 4a4c:A, 1b47:A, 1b47:B, 1b47:C, 3bum:B, 3bun:B, 3buo:B, 3buo:D, 3buw:B, 3buw:D, 3bux:B, 3bux:D, 2cbl:A, 1fbv:A, 4gpl:B, 5hkx:A, 5hky:A, 5hkz:A, 5hl0:A, 5j3x:A, 5j3x:C, 5j3x:D, 5j3x:E, 5j3x:F, 2k4d:A, 5o76:A, 5o76:C, 3ob1:B, 3ob2:B, 3plf:B, 3plf:D, 7siy:A, 6xar:A, 6xar:B, 2y1m:A, 2y1m:B, 2y1m:C, 2y1m:D, 2y1m:E, 2y1m:F, 2y1n:A, 2y1n:C, 1yvh:A
21 2djb:A 72 53 0.2609 0.2500 0.3396 0.041
22 5dka:A 96 30 0.1884 0.1354 0.4333 0.062 5dka:B, 8gbq:B, 8gcb:B
23 2ecj:A 58 50 0.1884 0.2241 0.2600 0.10
24 3t6p:A 330 53 0.2464 0.0515 0.3208 0.11 3d9t:A, 3d9t:B, 3d9u:A, 8dsf:A, 8dsf:B, 8dsf:C, 8dsf:D, 8dso:D, 4eb9:A, 4eb9:B, 4eb9:C, 4eb9:D, 6exw:A, 6exw:C, 6hpr:A, 4hy4:A, 4hy4:B, 4hy5:A, 4hy5:B, 4lge:A, 4lge:B, 4lgu:A, 4lgu:B, 5m6n:A, 5m6n:B, 4mti:A, 4mti:B, 3mup:A, 3mup:B, 3mup:C, 3mup:D, 4mu7:A, 4mu7:B, 3oz1:A, 3oz1:B, 3oz1:C, 3oz1:D, 1qbh:A, 7trm:A, 3uw4:A, 6w74:A, 6w7o:C, 6w7o:D, 6w8i:F, 6w8i:D, 6w8i:E
25 3zni:A 390 39 0.1594 0.0282 0.2821 0.11 4a49:A, 5axi:B, 5axi:A, 5axi:C, 9fqh:A, 9fqi:A, 9fqj:A, 9fqj:B, 8gcy:A, 2ldr:A, 3pfv:A, 3pfv:B, 8qng:A, 8qnh:A, 8qni:A, 8qtg:A, 8qth:A, 8qtj:A, 8qtk:A, 8vw4:A, 8vw4:B, 8vw5:A, 8vw5:B, 3zni:E, 3zni:I, 3zni:M
26 2ecv:A 85 60 0.2174 0.1765 0.2500 0.11
27 2ecn:A 70 50 0.2174 0.2143 0.3000 0.15 5xek:A
28 5olm:B 132 45 0.2174 0.1136 0.3333 0.20 5jpx:A, 5olm:A
29 7bbd:B 160 45 0.2174 0.0938 0.3333 0.28 8a58:C, 8a58:D, 8c07:I, 8f1f:C, 8f1f:c, 6fga:A, 6fga:B, 6fga:C, 6fga:D, 6fga:E, 6fga:F, 6fga:G, 6fga:H, 5m93:B, 5m93:C, 7nbb:C, 5o44:E, 6s53:B, 6s53:A, 6s53:H, 6s53:G, 3zlz:B
30 6y2x:A 231 35 0.1739 0.0519 0.3429 0.34 6ir0:A, 6y22:A, 6y3j:A
31 6l8n:A 810 32 0.1594 0.0136 0.3438 0.36
32 7r76:A 1834 35 0.1884 0.0071 0.3714 0.74 7r77:A
33 1chc:A 68 40 0.1884 0.1912 0.3250 0.96
34 7xyz:B 456 30 0.1449 0.0219 0.3333 1.4 7xv2:A, 7xyy:A, 7xyy:B, 7xyz:A, 7xyz:C, 7xyz:D, 7xz0:A, 7xz0:B, 7xz1:A, 7xz1:B, 7xz2:A, 7xz2:B, 7xz2:C, 7xz2:D
35 7s6c:C 480 25 0.1449 0.0208 0.4000 1.5 7s6d:C
36 5zi6:A 55 34 0.1884 0.2364 0.3824 1.6 5zi6:B, 5zi6:C, 5zi6:D, 5zi6:E, 5zi6:F, 5zi6:G, 5zi6:H
37 6q63:A 751 28 0.1884 0.0173 0.4643 1.7 6q63:B, 6q63:C
38 7t02:A 1752 42 0.2174 0.0086 0.3571 2.1
39 7r78:A 1880 42 0.2174 0.0080 0.3571 2.1
40 2ysl:A 73 57 0.2174 0.2055 0.2632 2.2 2ysj:A
41 5jw7:B 61 41 0.1594 0.1803 0.2683 2.3
42 1jm7:B 97 46 0.2029 0.1443 0.3043 2.5 8grq:M, 7jzv:B, 7lyb:N
43 7enc:0 306 53 0.1884 0.0425 0.2453 2.7 1g25:A, 8gxq:HD, 8gxs:HD, 6nmi:H, 7nvw:3, 7nvx:3, 7nvy:3, 7nvz:3, 8wak:0, 8wal:0, 8wan:0, 8wao:0, 8wap:0, 8waq:0, 8war:0, 8was:0
44 4tkp:B 63 58 0.1884 0.2063 0.2241 2.7
45 7lbm:d 275 53 0.1884 0.0473 0.2453 3.4 8byq:7
46 3lrq:D 84 47 0.2319 0.1905 0.3404 3.4 3lrq:A, 3lrq:B, 3lrq:C
47 3ztg:A 92 71 0.3043 0.2283 0.2958 4.3 3ztg:B
48 3vk6:A 96 28 0.1304 0.0938 0.3214 5.0 2mq1:A
49 2ea6:A 69 28 0.1594 0.1594 0.3929 5.1
50 2yur:A 74 45 0.2029 0.1892 0.3111 5.5
51 1rmd:A 116 42 0.1884 0.1121 0.3095 6.5
52 4lg1:A 217 68 0.2319 0.0737 0.2353 6.9 8hl6:A, 8hl7:A, 4lg1:B, 4lg1:C, 7oat:C
53 1v87:A 114 36 0.1739 0.1053 0.3333 8.5
54 7dvq:M 191 40 0.1884 0.0681 0.3250 8.6 8i0r:K, 8i0s:K, 8i0t:K, 5z56:M, 5z58:M
55 6ff4:t 172 39 0.1884 0.0756 0.3333 9.1 8ch6:Z, 6ff7:t, 7qtt:Z
56 4orh:H 142 41 0.2029 0.0986 0.3415 9.5 4ayc:A, 4ayc:B, 4orh:C, 4orh:G, 4orh:K, 4orh:L, 4whv:C, 4whv:D, 4whv:I, 4whv:J
57 4wnx:A 429 24 0.1739 0.0280 0.5000 9.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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