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BioLiP
>protein
EEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMK

The query sequence (length=51) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2rvn:A 83 51 0.9804 0.6024 0.9804 1.35e-32
2 8uxq:A 170 47 0.9216 0.2765 1.0000 2.73e-29 3fdt:A
3 8uxq:A 170 44 0.2549 0.0765 0.2955 0.16 3fdt:A
4 3tzd:A 58 49 0.7255 0.6379 0.7551 1.12e-23 3dm1:A, 3dm1:C, 3dm1:G, 3dm1:E, 2l11:A
5 1guw:A 73 43 0.6863 0.4795 0.8140 1.11e-22 6d07:A, 6d07:B, 6d08:A, 6d08:B
6 6asz:A 53 49 0.6275 0.6038 0.6531 7.56e-20 6at0:A, 1kna:A, 1kne:A, 6mha:A, 1q3l:A
7 4u68:A 64 49 0.5098 0.4062 0.5306 1.67e-13 4quf:A, 4quf:B, 4quf:C, 4quf:D, 4quf:E, 4quf:F, 4u68:B, 4u68:C
8 5epk:A 54 49 0.4510 0.4259 0.4694 2.08e-13 3h91:A, 3h91:B
9 5eq0:A 55 47 0.4314 0.4000 0.4681 6.03e-13 3i91:A
10 5epl:B 58 47 0.4510 0.3966 0.4894 1.41e-12 5epl:A
11 3gv6:A 56 47 0.4118 0.3750 0.4468 2.20e-12 3i90:A, 3i90:B
12 1pfb:A 55 47 0.4510 0.4182 0.4894 2.93e-11 1pdq:A
13 7n27:A 57 51 0.4706 0.4211 0.4706 5.67e-11 7n27:D, 7n27:B, 7n27:C, 7n27:E, 7n27:F
14 5ejw:A 80 47 0.4118 0.2625 0.4468 1.10e-10 5epj:A, 2kvm:A, 2l12:A, 2l1b:A, 4mn3:A, 8sii:A, 8sii:B, 6v2r:A, 4x3k:A, 4x3k:B, 4x3s:B, 4x3s:A, 4x3t:A, 4x3t:B, 4x3t:C, 4x3t:D, 4x3t:E, 4x3t:F, 4x3u:A, 4x3u:B
15 7vrf:A 61 49 0.4510 0.3770 0.4694 1.14e-10 7vrf:B
16 3qo2:A 61 50 0.4510 0.3770 0.4600 3.51e-10 7m5u:A, 3qo2:D, 3qo2:B, 3qo2:C, 3r93:A, 3r93:D, 3r93:B, 3r93:C, 3svm:A, 6v2s:A, 6v2s:B
17 6v2d:G 64 49 0.4706 0.3750 0.4898 9.13e-10 5jjz:A, 7slw:A, 7slw:B, 7slw:C, 7slw:D, 7slw:E, 7slw:F, 8sp6:A, 8sp6:B, 8sp6:C, 8sp6:D, 8sp6:E, 8sp6:F, 6v2d:I, 6v2d:K, 6v2d:A, 6v2d:C, 6v2d:E, 6v2h:A, 6v2h:C, 6v2h:E, 6v2h:G, 6v2h:I, 6v2h:K, 6v3n:A, 6v3n:B, 6v8w:A, 6v8w:B, 6v8w:C, 6v8w:D, 6v8w:E, 6v8w:F, 6v8w:G, 6v8w:H, 6v8w:I, 6v8w:J, 6v8w:K, 6v8w:L, 6v8w:M, 6v8w:N, 6v8w:O, 6v8w:P, 6v8w:Q, 6v8w:R, 6v8w:S, 6v8w:T, 6v8w:U, 6v8w:V, 6v8w:W, 6v8w:X, 6v8w:Y, 6v8w:Z
18 7vyw:A 47 40 0.3922 0.4255 0.5000 1.11e-09
19 6v41:AAA 61 53 0.3922 0.3279 0.3774 2.01e-09
20 2rsn:A 75 39 0.3922 0.2667 0.5128 1.76e-06 3g7l:A
21 7ubu:A 708 59 0.4314 0.0311 0.3729 2.09e-05 4ft4:A, 4ft4:B
22 4fsx:A 680 59 0.4314 0.0324 0.3729 2.15e-05 4fsx:B, 4ft2:B, 4ft2:A
23 2b2w:A 177 25 0.2941 0.0847 0.6000 6.21e-05 5afw:A, 2b2t:A, 2b2u:A, 2b2v:A, 4nw2:A, 4nw2:C, 4o42:A
24 5e4w:C 105 42 0.3333 0.1619 0.4048 0.005 5e4w:D, 5e4x:A
25 6hw2:B 69 44 0.2353 0.1739 0.2727 0.006 8jzw:C, 8jzw:D, 8jzw:A, 8jzw:B, 5t1i:A, 5t1i:B
26 3q6s:B 67 44 0.2353 0.1791 0.2727 0.020 3q6s:A, 3q6s:C, 3q6s:D, 5t1g:A
27 6ryr:W 708 35 0.2353 0.0169 0.3429 0.066 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
28 6q3m:C 219 35 0.2353 0.0548 0.3429 0.087 6q3m:A, 6q3m:B
29 6guu:B 204 33 0.2353 0.0588 0.3636 0.18 6guu:A
30 9gd1:W 849 34 0.2549 0.0153 0.3824 0.40
31 9gd1:W 849 56 0.2941 0.0177 0.2679 0.56
32 6s47:Bi 952 37 0.2157 0.0116 0.2973 0.43
33 7tn2:W 895 33 0.2941 0.0168 0.4545 0.50 9gd2:W, 9gd3:W
34 7tn2:W 895 56 0.2941 0.0168 0.2679 0.56 9gd2:W, 9gd3:W
35 6ftx:W 878 56 0.2941 0.0171 0.2679 0.56 6g0l:W, 5j70:A, 5j70:B, 3mwy:W, 3ted:A
36 6ftx:W 878 28 0.2549 0.0148 0.4643 0.95 6g0l:W, 5j70:A, 5j70:B, 3mwy:W, 3ted:A
37 6g0l:M 855 56 0.2941 0.0175 0.2679 0.56 7nkx:W, 5o9g:W
38 6g0l:M 855 28 0.2549 0.0152 0.4643 0.89 7nkx:W, 5o9g:W
39 6wbr:A 942 43 0.2745 0.0149 0.3256 0.64 6wc0:A
40 8q7h:A 1403 43 0.3137 0.0114 0.3721 0.71
41 8d2k:A 1105 43 0.2745 0.0127 0.3256 0.71 8d2l:A, 8d2n:A, 8d2p:A
42 8d2o:A 749 43 0.2745 0.0187 0.3256 0.73
43 8d2q:A 906 43 0.2745 0.0155 0.3256 0.79
44 8q7e:A 947 43 0.3137 0.0169 0.3721 1.0 8q7e:E, 8q7e:I
45 4ov9:A 380 44 0.2745 0.0368 0.3182 1.7 4ov4:A
46 4iup:B 134 33 0.2157 0.0821 0.3333 2.3 4iup:A, 4iuq:B, 4iuq:A, 4iur:B, 4iur:A, 4iut:B, 4iut:A, 4iuu:B, 4iuu:A, 4iuv:A, 4iuv:B
47 6k2m:E 258 35 0.2353 0.0465 0.3429 4.0 7wp3:A
48 8a22:Bn 118 24 0.1765 0.0763 0.3750 5.9 8apn:Bn, 8apo:Bn
49 8q0n:B 831 11 0.1569 0.0096 0.7273 6.3
50 8duj:D 3865 28 0.1765 0.0023 0.3214 6.7
51 3ui2:A 234 47 0.2745 0.0598 0.2979 6.7 3dep:A, 2hug:A
52 7y7b:6 173 34 0.2549 0.0751 0.3824 9.3 7y8a:6
53 5vhe:A 871 28 0.1961 0.0115 0.3571 9.5 6up3:A, 6up4:A, 5vhc:D, 5vhd:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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