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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
DRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNL
IAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIV
IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNV
IKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAA
VIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNR
IQEHFNKKIERLDTDDLDEIEKIAN

The query sequence (length=425) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6b4i:F 426 425 1.0000 0.9977 1.0000 0.0 6b4i:E, 6b4j:E, 6b4j:F, 6b4k:A, 6b4k:B, 3ews:A, 3ews:B, 3fht:A, 3fht:B, 3fmo:B, 3fmp:B, 3fmp:D, 3g0h:A
2 5elx:A 391 387 0.4635 0.5038 0.5090 1.99e-143 3peu:A, 3pev:A, 3pew:A, 3pey:A, 3rrm:A, 3rrn:A
3 3ex7:C 392 381 0.3341 0.3622 0.3727 8.24e-84 8c6j:7, 3ex7:H, 9fmd:7, 2hyi:C, 2hyi:I, 8i0w:u, 6icz:u, 2j0q:A, 2j0q:B, 2j0s:A, 2j0u:A, 6qdv:7, 2xb2:A, 2xb2:X, 5xjc:u, 5yzg:u, 7znj:A, 7znj:a, 7znj:F, 7znj:f, 7znj:K, 7znj:k
4 6xki:A 378 380 0.3647 0.4101 0.4079 1.63e-80 5zbz:A, 5zc9:A
5 2vso:A 366 380 0.3294 0.3825 0.3684 2.76e-79 1fuk:A, 2vso:B, 2vsx:A, 2vsx:B
6 2rb4:A 164 170 0.2447 0.6341 0.6118 6.03e-73
7 4bru:A 375 374 0.3341 0.3787 0.3797 3.32e-72
8 4ct4:B 378 374 0.3129 0.3519 0.3556 8.64e-65 5anr:B, 4ct4:D, 1vec:A, 2wax:C, 2way:A
9 8enk:B 381 385 0.3012 0.3360 0.3325 2.27e-64 8enk:A, 1xtj:A, 7znk:P, 7znk:p
10 5sup:B 383 387 0.2824 0.3133 0.3101 1.16e-57 5sup:A, 5sup:C, 5suq:A, 5suq:C
11 8i9v:Cb 642 366 0.2753 0.1822 0.3197 1.17e-47 8i9t:Cb, 8i9w:Cb, 8i9x:Cb
12 4kbf:A 365 328 0.2494 0.2904 0.3232 5.73e-46 2gxq:A, 2gxs:A, 2gxs:B, 2gxu:A, 3mwk:B, 3mwl:B, 3nbf:A, 3nbf:B, 3nbf:C, 3nbf:D
13 4d26:A 430 395 0.2753 0.2721 0.2962 1.39e-45 4d25:A
14 7pmq:C 458 347 0.2565 0.2380 0.3141 2.21e-44 7pli:A, 7pli:B, 7pli:J, 7pli:E, 7pli:F, 7pli:I, 7pmm:A, 7pmm:B, 7pmq:D, 7pmq:A, 7pmq:B
15 7liu:A 442 390 0.2800 0.2692 0.3051 2.61e-44 6cz5:A, 5e7j:A, 5e7m:A, 2i4i:A, 7liu:B, 4px9:A, 4px9:B, 4px9:C, 4pxa:A, 8ssw:A, 8ssw:B
16 5dtu:A 404 367 0.2588 0.2723 0.2997 4.33e-41
17 2db3:A 420 385 0.2706 0.2738 0.2987 5.68e-40 2db3:B, 2db3:C, 2db3:D
18 6o5f:A 417 385 0.2753 0.2806 0.3039 9.85e-39 6o5f:B
19 8v87:3 656 375 0.2447 0.1585 0.2773 5.70e-38 8v84:3
20 8fkv:NI 647 358 0.2400 0.1577 0.2849 1.86e-36 8fkt:NI, 8fku:NI, 8fkw:NI, 8fkx:NI, 8fky:NI
21 8arp:C 445 380 0.2447 0.2337 0.2737 1.41e-35 8arp:A, 8arp:B, 8arp:D, 8arp:E, 8arp:F
22 6uv1:A 438 376 0.2635 0.2557 0.2979 1.43e-35 6uv1:B, 6uv2:A, 6uv3:A, 6uv4:A
23 8y6o:I 597 398 0.2588 0.1843 0.2764 1.71e-35 8qp8:G, 6qw6:5X, 6qx9:5X, 8r08:G
24 4w7s:B 448 398 0.2706 0.2567 0.2889 1.82e-35
25 4ljy:A 451 353 0.2282 0.2151 0.2748 2.05e-34 7oqb:p, 7oqe:p
26 5z3g:Y 438 355 0.2376 0.2306 0.2845 2.51e-34 6c0f:p, 6cb1:p, 8e5t:p, 7nac:D, 7ohr:D, 7ohs:D, 7ohv:D, 7ohw:D, 7ohx:D, 7r6q:D, 7r7a:D, 8v87:D
27 8i9z:CE 465 352 0.2353 0.2151 0.2841 1.42e-33 8i9p:CE, 8i9r:CE, 8i9t:CE, 8i9v:CE, 8i9w:CE, 8i9x:CE, 8i9y:CE, 8ia0:CE
28 8tbx:A 458 414 0.2682 0.2489 0.2754 8.30e-33
29 6l5n:A 377 358 0.2588 0.2918 0.3073 2.26e-32 6l5m:A, 6l5m:B, 6l5m:C, 6l5m:D, 6l5m:E, 6l5n:B, 6l5o:A
30 7nac:x 539 395 0.2518 0.1985 0.2709 4.08e-30 7nad:x, 7r72:x, 7r7a:x
31 3i5x:A 509 383 0.2541 0.2122 0.2820 3.94e-28 4db2:C, 4db2:A, 4db2:B, 4db2:D, 4db4:A, 3i5y:A, 3i61:A, 3i62:A, 3sqw:A, 3sqx:A, 4tyn:A, 4tyw:A, 4tyy:A, 4tz0:A, 4tz6:A
32 8esq:D 427 345 0.2118 0.2108 0.2609 4.05e-28 8esr:D, 8eth:D, 8eup:D, 8euy:D, 8ev3:D
33 7oi6:x 374 395 0.2353 0.2674 0.2532 5.85e-28
34 8fky:SW 448 355 0.2259 0.2143 0.2704 5.87e-28 8fkp:SW, 8fkq:SW, 8fkr:SW, 8fks:SW, 8fkt:SW, 8fku:SW, 8fkv:SW, 8fkw:SW, 8fkx:SW, 3ly5:A
35 8v83:D 423 331 0.2118 0.2128 0.2719 5.94e-28 6elz:D, 8v84:D
36 5gju:A 199 205 0.1600 0.3417 0.3317 2.05e-27
37 6s8r:A 167 162 0.1365 0.3473 0.3580 4.76e-27
38 3b7g:A 205 206 0.1647 0.3415 0.3398 3.45e-26 3b7g:B, 2oxc:A, 2oxc:B
39 8ia0:CW 540 382 0.2494 0.1963 0.2775 2.90e-25 8i9z:CW
40 6aic:A 202 209 0.1553 0.3267 0.3158 9.36e-23
41 7am2:BW 447 434 0.2400 0.2282 0.2350 3.21e-21
42 8eti:D 391 330 0.1788 0.1944 0.2303 1.97e-20
43 3ber:A 220 204 0.1412 0.2727 0.2941 7.52e-20
44 6yxy:EB 663 487 0.2424 0.1554 0.2115 3.53e-17 7aoi:XB, 6yxx:EB
45 3dkp:A 240 226 0.1624 0.2875 0.3053 7.84e-16
46 5h1y:B 245 221 0.1459 0.2531 0.2805 2.34e-14 5h1y:A
47 2pl3:A 232 209 0.1341 0.2457 0.2727 1.40e-13
48 3fe2:A 234 226 0.1412 0.2564 0.2655 1.81e-12 3fe2:B
49 3iuy:A 213 196 0.1341 0.2676 0.2908 2.24e-11 3iuy:B
50 5v9x:A 772 414 0.2165 0.1192 0.2222 2.87e-08
51 1gm5:A 729 326 0.1835 0.1070 0.2393 3.65e-07
52 6o8h:A 571 137 0.1012 0.0753 0.3139 1.72e-06 6o8g:B, 6o8g:C
53 6crm:A 512 99 0.0706 0.0586 0.3030 2.13e-06 4tmu:A
54 6o8e:A 592 137 0.1012 0.0726 0.3139 2.21e-06 1d9z:A, 2fdc:B, 6o8e:B, 6o8f:A, 6o8f:B, 6o8g:A
55 1oyw:A 516 99 0.0682 0.0562 0.2929 1.37e-05 1oyy:A
56 7yym:A 1281 127 0.0776 0.0258 0.2598 4.46e-05 4ngb:A, 4ngc:A, 4ngg:A, 4nh3:A, 4nh5:A, 4nh6:A, 7yyn:A, 7zpi:A, 7zpj:A, 7zpk:A
57 7eld:A 1137 121 0.0918 0.0343 0.3223 1.57e-04 7ele:A
58 2fdc:A 505 137 0.0988 0.0832 0.3066 1.63e-04
59 2d7d:A 621 99 0.0729 0.0499 0.3131 3.77e-04 2nmv:A, 3v4r:B, 3v4r:A
60 5lst:A 617 110 0.0729 0.0502 0.2818 4.36e-04
61 7jl0:A 662 90 0.0659 0.0423 0.3111 5.44e-04 7jl2:A, 7jl2:C, 7jl2:E
62 6yhr:A 541 99 0.0612 0.0481 0.2626 0.001 3aaf:A, 3aaf:B, 7gqs:A, 7gqt:A, 7gqu:A, 8pfl:A, 8pfo:A, 8pfp:A, 8yle:A
63 7zmq:A 443 100 0.0659 0.0632 0.2800 0.001 5lb3:B, 5lb3:E, 5lb5:A, 5lb5:B, 5lb5:C, 5lb5:D, 5lb8:A, 5lb8:D, 5lba:B, 5lba:A, 5lba:C, 5lba:D, 7zml:A, 7zml:B, 7zml:C, 7zml:D, 7zmm:B, 7zmm:A, 7zmm:C, 7zmm:D, 7zmn:A, 7zmn:B, 7zmo:A, 7zmo:B, 7zmp:A, 7zmp:B, 7zmq:B, 7zmr:A, 7zmr:B, 7zms:A, 7zmt:A, 7zmt:B, 7zmv:A, 7zmv:B, 7zmv:C, 7zmv:D
64 8x19:I 864 98 0.0612 0.0301 0.2653 0.002 8x1c:I
65 7bkp:A 689 145 0.0824 0.0508 0.2414 0.007 6g19:A, 6gjz:A, 6gkh:A, 6gkm:A, 6h66:A, 7nic:A, 7niq:B
66 7bkq:A 640 91 0.0588 0.0391 0.2747 0.010
67 4q47:A 513 140 0.0824 0.0682 0.2500 0.017 4q47:B, 4q48:A, 4q48:B
68 8dfv:A 1664 112 0.0682 0.0174 0.2589 0.023
69 8dg5:A 1635 112 0.0682 0.0177 0.2589 0.024 8dg7:A
70 5zal:A 1314 39 0.0282 0.0091 0.3077 0.036 2eb1:A, 2eb1:B, 2eb1:C, 4ngd:A, 5zam:A
71 8x15:I 792 86 0.0565 0.0303 0.2791 0.060
72 5jc3:A 668 90 0.0541 0.0344 0.2556 0.066 5jc3:B, 5jc7:B, 5jcf:A, 5jcf:B, 5jch:A, 5jch:B
73 5jc7:A 641 90 0.0541 0.0359 0.2556 0.071
74 6p4f:C 436 63 0.0400 0.0390 0.2698 0.082 6p4f:A, 6p4w:A
75 2zja:A 700 216 0.1224 0.0743 0.2407 0.10 2zj5:A
76 6ryr:W 708 105 0.0659 0.0395 0.2667 0.12 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
77 8w0a:C 636 89 0.0565 0.0377 0.2697 0.15 8w0a:A
78 9asj:A 741 89 0.0565 0.0324 0.2697 0.18 9asj:B, 9bp9:A, 9bp9:C, 9bpa:A, 9bpa:C, 9bpa:E, 9bpa:G
79 9bha:A 793 89 0.0565 0.0303 0.2697 0.18 5a9f:A, 5aga:A, 9bh8:A, 9bh8:B, 9bh9:A, 9bh9:B, 9bha:B, 9c5q:C, 9c5q:A
80 7aud:A 522 205 0.1153 0.0939 0.2390 0.24 7aud:E, 7aud:B, 7aud:C, 7aud:D, 7aud:F
81 4cgz:A 629 205 0.1153 0.0779 0.2390 0.29 4cdg:A, 4cdg:B, 4o3m:A
82 4gl2:A 617 86 0.0565 0.0389 0.2791 0.34 4gl2:B
83 7vdv:A 809 104 0.0612 0.0321 0.2500 0.49 7vdt:A
84 7aju:JD 811 136 0.0635 0.0333 0.1985 0.56 6zqd:JD, 6zqe:JD, 6zqf:JD
85 7y8r:I 732 123 0.0729 0.0423 0.2520 0.67
86 8t5s:A 693 130 0.0753 0.0462 0.2462 0.71
87 8sp4:A 859 104 0.0682 0.0338 0.2788 0.72 8spg:A
88 7auc:A 493 101 0.0588 0.0507 0.2475 0.80
89 4v9f:L 149 69 0.0424 0.1208 0.2609 2.0 3cc2:L, 3cc4:L, 3cc7:L, 3cce:L, 3ccj:L, 3ccl:L, 3ccm:L, 3ccq:L, 3ccr:L, 3ccs:L, 3ccu:L, 3ccv:L, 3cd6:L, 3cma:L, 3cme:L, 3cpw:K, 3cxc:K, 1ffk:J, 3g4s:L, 3g6e:L, 3g71:L, 3i55:L, 3i56:L, 1jj2:K, 1k73:M, 1k8a:M, 1k9m:M, 1kc8:M, 1kd1:M, 1kqs:K, 1m1k:M, 1m90:M, 1n8r:M, 1nji:M, 2otj:L, 2otl:L, 3ow2:K, 1q7y:M, 1q81:M, 1q82:M, 1q86:M, 2qa4:L, 2qex:L, 1qvf:K, 1qvg:K, 1s72:L, 4v4p:AO, 4v4r:BP, 4v4s:BP, 4v4t:BP, 1vq4:L, 1vq5:L, 1vq6:L, 1vq7:L, 1vq8:L, 1vq9:L, 1vqk:L, 1vql:L, 1vqm:L, 1vqn:L, 1vqo:L, 1vqp:L, 1w2b:K, 1yhq:L, 1yi2:L, 1yij:L, 1yit:L, 1yj9:L, 1yjn:L, 1yjw:L
90 2qby:A 366 41 0.0400 0.0464 0.4146 2.9
91 6wil:A 536 23 0.0282 0.0224 0.5217 3.2
92 6dgd:A 704 130 0.0800 0.0483 0.2615 3.8 6dgd:B, 4nl4:H
93 6g0l:M 855 146 0.0706 0.0351 0.2055 5.3 7nkx:W, 5o9g:W
94 1z3i:X 644 74 0.0447 0.0295 0.2568 7.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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