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BioLiP
>protein
DDTKATVLSILADLTGEDVSSNMDVNLFDEGILDSMGSVQLLLELQNQLGIEVPVSEFQRSEWDTPAKIVAKVENLQ

The query sequence (length=77) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7r49:H 77 77 1.0000 1.0000 1.0000 1.74e-50
2 4bph:A 85 77 0.4416 0.4000 0.4416 6.33e-18
3 7arc:U 84 55 0.2338 0.2143 0.3273 0.022 7ard:U
4 7f2r:B 79 44 0.2208 0.2152 0.3864 0.044
5 2n5h:A 90 51 0.1818 0.1556 0.2745 0.11 2n5i:A, 6o6e:E
6 8bee:U 87 25 0.1299 0.1149 0.4000 0.76 7aqr:U, 7arb:U, 8bpx:U, 8bq5:U, 8bq6:U
7 8ba0:U 85 41 0.1558 0.1412 0.2927 0.83 8ba0:T, 8esz:AC
8 8e73:AB 85 25 0.1169 0.1059 0.3600 0.96
9 6dql:A 227 19 0.1169 0.0396 0.4737 1.6
10 8jfh:E 79 21 0.1169 0.1139 0.4286 2.4 8jfn:B
11 7ak6:U 88 22 0.0909 0.0795 0.3182 3.3 7a5h:w, 7ak6:T, 8c2s:T, 8c2s:U, 8ca3:T, 8ca5:T, 8ca5:U, 6g2j:U, 6g72:U, 5gup:O, 5gup:X, 5lnk:j, 5lnk:X, 6odd:A, 7oi6:w, 7oi8:w, 7oie:w, 8olt:T, 8om1:U, 5ool:w, 5oom:w, 8pw7:T1, 8q0a:T, 8q0a:U, 8q0f:U, 8q0o:U, 8q1p:T, 8q1u:T, 8q1y:U, 8q25:T, 8q45:T, 8q46:T, 8q46:U, 8q47:T, 8q47:U, 8q49:U, 6q9b:AB, 6q9d:AA, 6qa9:AA, 6qa9:AB, 6qbx:AA, 6qbx:AB, 6qc5:AA, 6qc6:AA, 6qc7:AA, 6qc8:AB, 7qsd:T, 7qsl:T, 7qsn:T, 8qu5:w, 7r41:T, 7r43:T, 7r44:T, 7r45:T, 7r46:T, 7r47:T, 7r47:U, 7r48:T, 7r4c:T, 7r4d:T, 7r4f:U, 7r4g:T, 8rgt:T, 8ud1:1U, 8ueo:1T, 8ueo:1U, 8uep:1U, 8ueq:1T, 8ueq:1U, 8uer:1T, 8uer:1U, 8ues:1T, 8ues:1U, 8uet:1T, 8ueu:1T, 8ueu:1U, 8uev:1T, 8uew:1T, 8uew:1U, 8uex:1T, 8uex:1U, 8uey:1T, 8uey:1U, 8uez:1T, 8uez:1U, 8ugh:1U, 8ugi:1U, 8ugj:1U, 8ugn:1T, 8ugn:1U, 8ugn:5U, 8ugr:1U, 8ugr:5T, 8ugr:5U, 7v2d:X, 7v2f:X, 7v2k:X, 7v30:X, 7v32:X, 7v33:G, 7v3m:X, 7vbl:X, 7vbp:X, 7vwj:G, 7vwl:X, 7vy1:X, 7vye:X, 7vyi:X, 7vzv:X, 7w00:X, 7w0h:X, 7w1o:X, 7w1p:X, 7w20:X, 7w2k:X, 7w2l:X, 7w31:G, 7w32:X, 7w35:X, 7w4c:X, 7w4g:X, 7w4j:X, 7w4k:X, 7w4l:X, 7w4n:X, 7zdh:X, 7zdm:j, 7zdm:X, 7zdp:X, 7zdp:j, 6zka:X, 6zkb:X, 6zkc:X, 6zkd:j, 6zke:X, 6zkf:X, 6zkg:X, 6zkh:X, 6zkh:j, 6zki:X, 6zkj:X, 6zkk:X, 6zkl:X, 6zkm:X, 6zkm:j, 6zkn:X, 6zkn:j, 6zko:X, 6zkp:X, 6zkp:j, 6zkr:X, 6zks:X, 6zkt:X, 6zku:X, 6zr2:T, 6zr2:U, 6ztq:U
12 1f3b:A 222 22 0.1169 0.0405 0.4091 4.7 1ev4:A, 1ev4:C, 1ev4:D, 1ev9:A, 1ev9:C, 1ev9:D, 1f3a:A, 1f3a:B, 1f3b:B, 5lcz:A, 5lcz:B, 1ml6:A, 1ml6:B
13 2d2m:A 140 27 0.1429 0.0786 0.4074 5.1 2d2n:A, 7e96:A, 7e97:A, 7e98:A, 7e99:A, 2zfo:A, 2zs0:A, 2zs1:A
14 4h2w:D 75 40 0.1688 0.1733 0.3250 6.2 4h2x:D
15 2eht:A 77 21 0.1039 0.1039 0.3810 6.6
16 7k3z:A 564 20 0.1299 0.0177 0.5000 7.1 7k3z:B, 7k3z:C, 7k3z:D, 7k3z:E, 7k3z:F, 7k3z:G
17 3zs6:A 506 23 0.1299 0.0198 0.4348 7.5
18 2qzx:A 342 43 0.1948 0.0439 0.3488 7.9 2qzx:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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