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BioLiP
>protein
AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEEA

The query sequence (length=66) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4dhv:B 66 66 0.9848 0.9848 0.9848 2.91e-41 4dhv:A, 3pni:A, 3pni:B, 1siz:A, 1siz:C, 1sj1:A, 1sj1:B, 2z8q:A, 2z8q:B
2 1rof:A 60 64 0.4697 0.5167 0.4844 9.15e-16 1vjw:A
3 4ov1:A 66 62 0.3636 0.3636 0.3871 1.38e-08 4id8:A
4 1f2g:A 58 55 0.3485 0.3966 0.4182 1.68e-07 1fxd:A
5 1dwl:A 59 61 0.3636 0.4068 0.3934 3.85e-07
6 8amp:A 65 68 0.3333 0.3385 0.3235 4.23e-06
7 8amq:A 464 63 0.2879 0.0409 0.3016 7.65e-06 8amo:A, 8ckn:A
8 1dax:A 64 67 0.4242 0.4375 0.4179 0.004 1dfd:A, 1fxr:A, 1fxr:B
9 7m1n:A 71 70 0.3182 0.2958 0.3000 0.016 7m1n:B, 7m1o:A, 7m1o:B
10 8a8o:D 102 59 0.2424 0.1569 0.2712 0.020 8a8o:C
11 2vkr:A 103 65 0.3182 0.2039 0.3231 0.063 2vkr:B, 2vkr:C, 2vkr:D, 2vkr:E, 2vkr:F, 2vkr:G, 1xer:A
12 8c0z:C 158 63 0.3636 0.1519 0.3810 0.098 8c0z:F
13 5t61:L 348 71 0.3333 0.0632 0.3099 0.16 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
14 5t61:L 348 62 0.3030 0.0575 0.3226 0.22 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
15 5t61:L 348 64 0.2879 0.0546 0.2969 1.8 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
16 5t61:L 348 74 0.3333 0.0632 0.2973 4.9 5t5i:F, 5t5i:N, 5t5m:F, 5t61:F, 5t61:R, 5t61:X, 5t61:d, 5t61:j, 5t61:p, 5t61:v
17 7bgi:C 80 59 0.3182 0.2625 0.3559 0.35 7blx:C, 8cmo:C, 7d0j:C, 7dz7:C, 7dz8:C, 8h2u:C, 6ijj:C, 6ijo:C, 6jo5:C, 6jo6:C, 7r3k:C, 7wyi:C, 7wzn:C, 7zq9:C, 7zqc:C, 7zqd:C, 7zqd:C2
18 3ge1:A 499 61 0.3030 0.0401 0.3279 0.36 3ge1:B, 3ge1:C, 3ge1:D
19 7ew6:C 81 59 0.3182 0.2593 0.3559 0.36 7a4p:C, 8bcv:C, 8bcw:C, 7dkz:C, 7ewk:C, 7f9o:C, 7f9o:g, 8htu:C, 6igz:C, 8j6z:C, 8j7a:C, 8j7b:C, 7ksq:C, 7kux:C, 6l35:C, 5l8r:C, 3lw5:C, 6ly5:c, 2o01:C, 4rku:C, 7wfd:AC, 7wfe:BC, 7wg5:AC, 7wg5:BC, 8wgh:C, 2wsc:C, 2wse:C, 2wsf:C, 4xk8:C, 4xk8:c, 7xqp:C, 4y28:C, 6yac:C, 7yca:C, 6yez:C, 5zji:C, 6zoo:C, 6zxs:C
20 7dr0:C 80 59 0.3182 0.2625 0.3559 0.45 7dr1:C, 7dr2:aC, 7dr2:bC, 7dr2:cC, 7dr2:dC, 6zzx:C, 6zzy:C
21 8wm6:C 80 59 0.3182 0.2625 0.3559 0.66 8wmj:C, 8wmv:C, 8wmw:C, 7y5e:CN, 7y5e:C2, 7y7a:C7, 7y7a:Co, 7y7b:C, 7y8a:C
22 5oy0:c 81 59 0.3333 0.2716 0.3729 0.72 8am5:c, 8asl:c, 8asp:c, 7blz:C, 7coy:aC, 7coy:bC, 7coy:cC, 7dwq:C, 7f4v:aC, 7f4v:bC, 7f4v:cC, 4fe1:C, 7fix:C1, 7fix:C2, 7fix:C3, 6fos:C, 6hqb:C, 1jb0:C, 6jeo:aC, 6jeo:bC, 6jeo:cC, 6jeo:dC, 1k0t:A, 6k33:aC, 6k33:bC, 6k33:cC, 6k61:C, 6k61:c, 6kif:C, 6kif:N, 6kif:g, 6kig:C, 6kig:N, 6kig:g, 6kmw:aC, 6kmw:bC, 6kmw:cC, 6kmx:aC, 6kmx:bC, 6kmx:cC, 4kt0:C, 6l4u:C, 4l6v:C, 4l6v:c, 4l6v:3, 6lu1:C, 7lx0:N, 7lx0:c, 7lx0:C, 7m75:C, 7m76:C, 7m78:C, 6nwa:C, 6nwa:c, 6nwa:N, 7o1v:C, 5oy0:C, 5oy0:3, 3pcq:C, 6pfy:C, 6pfy:N, 6pfy:a, 6pgk:C, 6pgk:N, 6pgk:a, 6pnj:C, 6pnj:N, 6pnj:c, 7qco:C, 7qco:H, 7qco:h, 7qco:c, 6qph:C, 6rhz:C, 7s3d:C, 7s3d:N, 7s3d:c, 6sl5:C, 6tcl:C1, 6tcl:C2, 6tcl:C, 6tcl:CC, 6tra:C, 6trc:C, 6trc:c, 6trc:3, 6trd:C, 6trd:c, 6trd:3, 7umh:C, 7umh:N, 7umh:c, 6uzv:C, 6uzv:c, 6uzv:3, 6vpv:C, 6vpv:c, 6vpv:3, 8wey:C, 7y3f:C, 6yxr:C, 5zf0:C1, 5zf0:C2, 5zf0:C3, 5zf0:C4, 5zf0:C6, 5zf0:C5, 5zgb:C, 5zgh:C
23 8jjr:c 86 59 0.3030 0.2326 0.3390 0.97 8jw0:c, 8jze:c, 8jzf:c
24 1iqz:A 81 65 0.3030 0.2469 0.3077 1.1 1ir0:A, 1wtf:A, 1wtf:B, 1wtf:C, 1wtf:D, 7yl8:A
25 4g68:A 392 29 0.1970 0.0332 0.4483 2.6 4g68:B
26 7qv7:D 448 32 0.1970 0.0290 0.4062 4.2 7qv7:K, 7qv7:Q, 7qv7:R, 7qv7:V, 7qv7:Z
27 6brh:B 502 28 0.1818 0.0239 0.4286 4.5 6brg:A, 6brg:B, 6brg:C, 6brg:D, 6brh:A, 6brk:A
28 6tmf:d 582 15 0.1212 0.0137 0.5333 4.6 3ozx:A, 3ozx:B
29 9awj:B 408 35 0.2121 0.0343 0.4000 4.8
30 6xyw:Az 82 17 0.1364 0.1098 0.5294 5.4
31 2pbz:A 293 23 0.1667 0.0375 0.4783 6.0 2pbz:B, 2pbz:C
32 6bye:A 861 21 0.1515 0.0116 0.4762 6.5 6bye:B, 6byg:A, 6byg:B, 6byi:A, 6byi:B
33 8vlx:A 2431 40 0.2121 0.0058 0.3500 6.8
34 6pop:A 475 19 0.1364 0.0189 0.4737 6.9 6pop:B, 6pop:C, 6pop:D, 6pop:E, 6pop:F
35 7p8n:B 613 18 0.1212 0.0131 0.4444 8.2 7p5h:B, 7p5h:E, 7p5h:b, 7p5h:e, 7p8n:b, 7p91:b, 7p91:B, 7p92:B
36 7p8n:B 613 59 0.2727 0.0294 0.3051 9.1 7p5h:B, 7p5h:E, 7p5h:b, 7p5h:e, 7p8n:b, 7p91:b, 7p91:B, 7p92:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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