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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
AVFKNITPIPDVNTFLDVVLSRTQRKTPTVIRSGFKISRIRGFYGRKVKFTQDTITEKLDSILQEFPKLNDIHPFHADLL
NILYDRDHLKIALSQLSTAKHLVENVARDYIRLLKYGDSLYRCKQLKRAALGRMATIIKRQKSSLEFLEQVRQHLSRLPA
IDPNTRTLLVCGYPNVGKSSFMNKVTRAQVDVQPYAFTTKSLFVGHFDYKYLRWQVIDTPGINTIEMQSITAMAHLRSAV
LYFMDLSEMCGYSVAAQVKLYHSIKPLFANKVTILVLNKIDAVKVVQTSCVQDIGVMDVRTTACEALLAARLARDIEAAN
GGAGVYNVELRDKYILQDPSWKYDRMPELLDGKNVADFV

The query sequence (length=359) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8eti:b 391 371 1.0000 0.9182 0.9677 0.0 8esr:b, 8etg:b
2 8etc:b 415 395 1.0000 0.8651 0.9089 0.0 8esq:b, 8etj:b
3 8v83:b 423 395 0.6630 0.5626 0.6025 7.77e-176 6elz:b, 6em1:b, 6em5:b, 7ohp:b, 7ohr:b, 7ohs:b, 7ohu:b, 7ohv:b, 8v84:b
4 6ylg:b 613 419 0.6630 0.3883 0.5680 5.68e-169 7nac:b, 7of1:b, 7r7a:b, 6ylh:b
5 8hfr:rA 647 441 0.6657 0.3694 0.5420 2.54e-166 7bt6:b, 7btb:b, 6c0f:W, 6ft6:b, 3jct:b, 5jcs:o, 6m62:b, 6n8j:b, 6n8k:b, 7nad:b, 7oh3:b, 7ohq:b, 7oht:b, 7r72:b, 7u0h:b, 7ug6:b, 7uoo:b, 7uqb:b, 7uqz:b, 7v08:b, 4v7f:o, 8v87:b, 6ylx:b, 6yly:b, 7z34:b
6 8fl4:SR 593 418 0.6462 0.3912 0.5550 3.28e-160 8fkr:SR, 8fks:SR
7 8ir1:4 620 439 0.6462 0.3742 0.5285 7.66e-157 8fkt:SR, 8fku:SR, 8fkv:SR, 8fkw:SR, 8fkx:SR, 8fky:SR, 8fkz:SR, 8fl0:SR, 8fl2:SR, 8fl3:SR, 8fl6:SR, 8fl7:SR, 8fl9:SR, 8fla:SR, 8flb:SR, 8flc:SR, 8fld:SR, 8fle:SR, 8flf:SR, 8idt:4, 8idy:4, 8ie3:4, 8ine:4, 8inf:4, 8ink:4, 8ipd:4, 8ipx:4, 8ipy:4, 8ir3:4, 6lss:4, 6lu8:4
8 8pv1:CH 627 447 0.6407 0.3668 0.5145 1.29e-156 8i9r:CH, 8i9t:CH, 8i9v:CH, 8i9w:CH, 8i9x:CH, 8i9y:CH, 8i9z:CH, 8ia0:CH, 8pv2:CH, 8pv3:CH, 8pv4:CH, 8pv5:CH, 8pv6:CH, 8pv7:CH, 8pv8:CH, 8pvk:CH, 8pvl:CH
9 7ohy:b 375 370 0.5850 0.5600 0.5676 1.47e-148
10 7ohx:b 248 301 0.4318 0.6250 0.5150 5.45e-91
11 7ohw:b 259 315 0.3872 0.5367 0.4413 1.97e-79
12 8eup:b 151 165 0.3231 0.7682 0.7030 1.45e-66
13 8eup:b 151 37 0.1031 0.2450 1.0000 3.77e-20
14 2e87:A 356 287 0.2201 0.2219 0.2753 1.55e-45
15 8euy:b 120 130 0.2312 0.6917 0.6385 1.09e-41
16 8euy:b 120 109 0.1421 0.4250 0.4679 1.77e-20
17 2qu8:A 194 180 0.2061 0.3814 0.4111 2.18e-41
18 6n8l:b 248 49 0.0975 0.1411 0.7143 1.73e-17
19 7r7c:b 54 45 0.0891 0.5926 0.7111 3.18e-16
20 7naf:b 74 43 0.0836 0.4054 0.6977 1.19e-12
21 7nrc:So 347 101 0.0919 0.0951 0.3267 1.22e-08
22 2wjg:A 170 149 0.1003 0.2118 0.2416 4.92e-06 2wjg:B, 2wjh:A, 2wjh:B, 2wji:A, 2wji:B, 2wjj:A, 2wjj:B
23 7rr5:R 355 51 0.0557 0.0563 0.3922 2.84e-05
24 3iev:A 302 126 0.1058 0.1258 0.3016 4.81e-05 7c1o:A, 3r9w:A, 3r9x:A
25 7o9k:G 337 52 0.0613 0.0653 0.4231 2.83e-04 7of5:x, 7of7:x
26 1wf3:A 296 131 0.0947 0.1149 0.2595 5.79e-04
27 3a1s:A 255 115 0.0947 0.1333 0.2957 7.62e-04 3a1s:B, 3a1t:A, 3a1u:A, 3a1u:B
28 5m7h:A 420 152 0.1114 0.0952 0.2632 0.001 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
29 5m7h:A 420 121 0.0864 0.0738 0.2562 3.7 4dcs:A, 4dct:A, 4dcu:A, 2hjg:A, 5mbs:A, 5x4b:A, 5x4b:B
30 7oi6:y 331 54 0.0557 0.0604 0.3704 0.002 8pk0:t
31 7bl2:9P1 338 132 0.1114 0.1183 0.3030 0.010 7bl3:9P, 7bl4:9, 7bl5:9, 7bl6:9, 4csu:9, 5m04:A
32 5ady:6 426 211 0.1421 0.1197 0.2417 0.012 8g31:6, 8g34:6, 8g38:6, 7yla:6
33 1xzq:A 449 135 0.0864 0.0690 0.2296 0.017 1xzq:B
34 6g0z:A 290 109 0.0780 0.0966 0.2569 0.018 6g0z:B, 6g12:A, 6g12:B, 6g14:B, 6g14:A, 6g15:A, 6g15:B
35 2gj8:D 172 56 0.0501 0.1047 0.3214 0.019 2gj8:A, 2gj8:B, 2gj8:C, 2gj9:A, 2gj9:B, 2gj9:C, 2gj9:D, 2gja:A, 2gja:B
36 3ieu:A 293 67 0.0557 0.0683 0.2985 0.020 3ieu:B
37 5ub8:A 174 134 0.1031 0.2126 0.2761 0.042
38 3w5j:A 194 53 0.0474 0.0876 0.3208 0.058
39 1h65:A 257 95 0.0808 0.1128 0.3053 0.078 3bb1:A, 3bb1:B, 3bb1:C, 3bb1:D, 3bb1:E, 3bb1:F, 3bb1:G, 3bb1:H, 1h65:B, 1h65:C
40 3geh:A 442 152 0.0975 0.0792 0.2303 0.090
41 8fkt:NB 387 70 0.0696 0.0646 0.3571 0.095 8fkp:NB, 8fku:NB, 8fkv:NB, 8fkw:NB, 8fkx:NB, 8fky:NB, 8fkz:NB, 8fl0:NB, 8ink:u, 8ipd:u, 8ipx:u, 8ipy:u
42 2dby:A 355 36 0.0446 0.0451 0.4444 0.10
43 1puj:A 261 66 0.0529 0.0728 0.2879 0.13 6ppk:W
44 6xrs:B 392 81 0.0696 0.0638 0.3086 0.13 6xrs:A, 6xrs:D, 6xrs:C
45 6xrs:B 392 69 0.0529 0.0485 0.2754 0.59 6xrs:A, 6xrs:D, 6xrs:C
46 5ee3:B 364 30 0.0362 0.0357 0.4333 0.17 5ee3:A, 5ee9:A
47 8kie:y 363 30 0.0334 0.0331 0.4000 0.28
48 8fl2:NC 511 52 0.0613 0.0431 0.4231 0.43 8fkz:NC, 8fl0:NC, 8fl3:NC, 8fl4:NC, 8idt:A, 8idy:A, 8ie3:A, 8ine:A, 8inf:A, 8ink:w, 8ipd:w, 8ipx:w, 8ipy:w, 8ir1:w, 8ir3:w
49 8a4a:B 172 141 0.1086 0.2267 0.2766 0.44 6y7g:A, 6y7g:B
50 7of1:m 229 81 0.0696 0.1092 0.3086 0.44
51 3i8x:B 261 66 0.0529 0.0728 0.2879 0.46 3hyt:A, 3hyt:B, 3hyt:C, 3i8x:A, 3i8x:C, 4r98:A, 4r98:B
52 8pv1:Cd 462 54 0.0613 0.0476 0.4074 0.52 8pv2:Cd, 8pv3:Cd, 8pv4:Cd, 8pv5:Cd, 8pv6:Cd, 8pv7:Cd, 8pv8:Cd, 8pvk:Cd, 8pvl:Cd
53 1lnz:A 342 90 0.0696 0.0731 0.2778 0.59 1lnz:B
54 9bht:A 220 134 0.0975 0.1591 0.2612 0.87 9bht:F
55 8ptk:f 4502 195 0.1198 0.0096 0.2205 0.87 8ptk:e
56 7z8f:e 4579 195 0.1198 0.0094 0.2205 0.89 5owo:A, 8pr2:f, 8ptk:m, 8ptk:n, 7z8f:f, 7z8f:m, 7z8f:n, 7z8h:A
57 8kab:h 430 33 0.0390 0.0326 0.4242 1.0
58 7y9i:A 362 30 0.0306 0.0304 0.3667 1.0
59 8gbj:C 317 74 0.0696 0.0789 0.3378 1.2 8faz:C, 8ouy:B, 8ouz:B
60 2wib:A 261 66 0.0557 0.0766 0.3030 1.2 2wib:B, 2wic:A
61 1bxr:A 1073 173 0.1114 0.0373 0.2312 1.3 1a9x:A, 1a9x:C, 1a9x:E, 1a9x:G, 1bxr:C, 1bxr:E, 1bxr:G, 1c30:A, 1c30:C, 1c30:E, 1c30:G, 1c3o:A, 1c3o:C, 1c3o:E, 1c3o:G, 1ce8:A, 1ce8:C, 1ce8:E, 1ce8:G, 1cs0:A, 1cs0:C, 1cs0:E, 1cs0:G, 1jdb:B, 1jdb:E, 1jdb:H, 1jdb:K, 1kee:A, 1kee:C, 1kee:E, 1kee:G, 1m6v:A, 1m6v:C, 1m6v:E, 1m6v:G, 1t36:A, 1t36:C, 1t36:E, 1t36:G
62 1mky:A 407 36 0.0446 0.0393 0.4444 1.4
63 3iq0:B 308 80 0.0557 0.0649 0.2500 1.4 3iq0:A
64 5m1j:A6 539 115 0.0752 0.0501 0.2348 1.4
65 6s47:Bi 952 37 0.0362 0.0137 0.3514 1.5
66 6n8j:m 378 52 0.0585 0.0556 0.4038 1.7
67 7btb:m 469 52 0.0585 0.0448 0.4038 1.7 7bt6:m, 6ft6:m, 3jct:m, 6m62:m, 7oh3:m, 7ohq:m, 7oht:m, 7ug6:m, 7uoo:m, 7uqb:m, 7uqz:m, 7uui:m, 7v08:m, 6ylg:m, 6ylh:m
68 2iw3:B 980 37 0.0334 0.0122 0.3243 2.0 7b7d:EF, 2iw3:A, 2iwh:A, 2iwh:B
69 2dyk:A 150 32 0.0306 0.0733 0.3438 2.1 2dyk:B
70 7e1t:B 174 108 0.0724 0.1494 0.2407 2.5 7e1t:A, 4qxa:A, 1s8f:A, 1s8f:B, 1wms:A, 1wms:B, 1yzl:A
71 6lsr:1 247 24 0.0334 0.0486 0.5000 3.0
72 4rkf:B 172 125 0.0975 0.2035 0.2800 3.2 4rkf:A
73 5jhf:F 405 113 0.0864 0.0765 0.2743 3.3 5jhf:C, 4p1w:C
74 1u0l:A 278 113 0.0752 0.0971 0.2389 4.3 1u0l:B, 1u0l:C
75 7zgz:X 753 79 0.0446 0.0212 0.2025 4.6 8c7f:B
76 8dmf:A 718 92 0.0613 0.0306 0.2391 5.1 7uvp:A
77 8pfh:C 289 71 0.0613 0.0761 0.3099 5.2
78 6rxt:CI 822 112 0.0836 0.0365 0.2679 5.8 6rxu:CI, 6rxv:CI, 6rxx:CI, 6rxy:CI, 6rxz:CI
79 8i9w:CL 397 86 0.0696 0.0630 0.2907 5.8 8i9t:CL, 8i9v:CL, 8i9x:CL, 8i9y:CL, 8i9z:CL, 8ia0:CL, 8pv1:CL, 8pv2:CL, 8pv3:CL, 8pv4:CL, 8pv5:CL, 8pv6:CL, 8pv7:CL, 8pv8:CL, 8pvk:CL, 8pvl:CL
80 5ty0:A 378 110 0.0724 0.0688 0.2364 5.9
81 7wtl:CL 610 67 0.0529 0.0311 0.2836 6.2 5wyj:B1, 5wyk:B1
82 3j8g:X 418 27 0.0334 0.0287 0.4444 6.4
83 7pd3:z 311 23 0.0306 0.0354 0.4783 7.3 8pk0:z, 8qsj:z
84 3dz8:A 178 125 0.0975 0.1966 0.2800 8.1 8a4b:B, 8a4b:D, 8a4c:B, 8a4c:D
85 3vkg:A 2954 62 0.0501 0.0061 0.2903 8.5
86 2j68:A 680 38 0.0279 0.0147 0.2632 8.8 2w6d:A, 2w6d:B
87 3vkh:B 2908 62 0.0501 0.0062 0.2903 8.9
88 3vkg:B 2853 62 0.0501 0.0063 0.2903 9.0
89 3vkh:A 3042 62 0.0501 0.0059 0.2903 9.2
90 5nr8:A 377 56 0.0474 0.0451 0.3036 9.4 1hki:A, 1hkj:A, 1hkk:A, 1hkm:A, 6jjr:A, 6jk6:A, 5nra:A, 5nrf:A, 1waw:A, 1wb0:A, 6ze8:A, 6ze8:B, 6ze8:C, 6ze8:D, 6ze8:E, 6ze8:F
91 6n8n:W 377 56 0.0613 0.0584 0.3929 9.8 6n8o:W

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218