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BioLiP
>protein
ATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCV
AYPTSDCVIETHKEEEL

The query sequence (length=97) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1rfk:B 97 97 1.0000 1.0000 1.0000 2.88e-67 3p63:A, 3p63:B, 1rfk:A
2 1czp:A 98 97 0.8660 0.8571 0.8660 3.15e-58 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
3 3b2g:A 98 96 0.8454 0.8367 0.8542 1.22e-57 3b2g:B
4 7s3d:X 97 96 0.8454 0.8454 0.8542 3.24e-57 7s3d:W, 7s3d:x
5 4fxc:A 98 97 0.8454 0.8367 0.8454 1.07e-56
6 3ab5:A 97 95 0.7216 0.7216 0.7368 5.03e-51 3ab5:B, 3wcq:A
7 7y5e:NN 99 97 0.7629 0.7475 0.7629 3.09e-50 7y5e:N2, 7y7a:N7, 7y7a:No
8 6xtf:D 96 97 0.7423 0.7500 0.7423 5.29e-49 6xtf:C
9 5auk:A 96 97 0.7835 0.7917 0.7835 1.67e-48 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
10 6khi:1 98 97 0.7423 0.7347 0.7423 8.44e-48 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
11 3av8:A 97 98 0.7835 0.7835 0.7755 2.53e-47 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
12 6iri:A 107 96 0.6701 0.6075 0.6771 5.28e-45
13 7akt:A 107 95 0.7010 0.6355 0.7158 3.29e-44 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
14 1gaq:B 98 97 0.7320 0.7245 0.7320 7.19e-44 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
15 6yac:N 97 97 0.7113 0.7113 0.7113 8.40e-44 6yez:N
16 4zho:A 97 97 0.7010 0.7010 0.7010 1.60e-43 4zho:B
17 5h57:A 97 97 0.7010 0.7010 0.7010 1.87e-43 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
18 1a70:A 97 97 0.6804 0.6804 0.6804 6.90e-43
19 1pfd:A 96 97 0.6701 0.6771 0.6701 5.56e-42
20 1awd:A 94 95 0.6907 0.7128 0.7053 2.63e-41
21 4zhp:A 98 97 0.6804 0.6735 0.6804 5.06e-40
22 4itk:A 104 82 0.6082 0.5673 0.7195 2.38e-38
23 1frr:A 95 81 0.5876 0.6000 0.7037 3.84e-38 1frr:B
24 1iue:A 98 98 0.5876 0.5816 0.5816 3.88e-36 1iue:B
25 6vjv:A 96 96 0.5361 0.5417 0.5417 6.96e-34 6vjv:B
26 1wri:A 93 95 0.5979 0.6237 0.6105 5.95e-32
27 8jc1:A 267 97 0.6186 0.2247 0.6186 3.43e-31 8jc1:B, 8jc1:C, 8jc1:D
28 4n58:A 266 97 0.5567 0.2030 0.5567 3.68e-29 4n58:B, 4n59:A, 4n59:B
29 1frd:A 98 94 0.5258 0.5204 0.5426 2.12e-28
30 1e0z:A 128 73 0.3505 0.2656 0.4658 3.97e-16 1e10:A
31 1doi:A 128 73 0.3402 0.2578 0.4521 8.65e-16
32 1krh:A 337 101 0.3196 0.0920 0.3069 7.97e-10 1krh:B
33 2pia:A 321 69 0.2165 0.0654 0.3043 1.26e-07
34 3zyy:X 628 83 0.2577 0.0398 0.3012 2.41e-07 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
35 5ogx:A 333 78 0.2268 0.0661 0.2821 1.44e-06
36 6laa:A 753 65 0.1856 0.0239 0.2769 1.83e-05 6gii:A, 6ldl:A
37 6kbh:A 765 70 0.2062 0.0261 0.2857 4.54e-05
38 7ylr:A 326 62 0.1856 0.0552 0.2903 4.55e-05
39 1jq4:A 98 90 0.3093 0.3061 0.3333 4.88e-05
40 7c3b:B 306 36 0.1649 0.0523 0.4444 2.10e-04
41 4wqm:A 326 89 0.2474 0.0736 0.2697 2.58e-04
42 7c3b:C 334 36 0.1649 0.0479 0.4444 2.69e-04 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
43 6icm:D 87 65 0.1753 0.1954 0.2615 0.006
44 5frt:E 105 53 0.1649 0.1524 0.3019 0.048 5ffi:E
45 5frt:A 119 53 0.1649 0.1345 0.3019 0.056 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
46 4hea:3 756 41 0.1443 0.0185 0.3415 0.11 2fug:3, 2fug:C, 2fug:L, 2fug:U, 4hea:D, 6i0d:3, 6i0d:D, 6i1p:3, 6i1p:D, 3i9v:3, 3i9v:C, 3iam:3, 3iam:C, 3ias:3, 3ias:C, 3ias:L, 3ias:U, 3m9s:3, 3m9s:C, 6q8o:3, 6q8o:D, 6q8w:3, 6q8w:D, 6q8x:3, 6q8x:D, 6y11:3, 6y11:D, 2ybb:3, 6ziy:3, 6zjl:3, 6zjn:3, 6zjy:3
47 7q5y:A 626 38 0.1649 0.0256 0.4211 0.13 7q5y:G, 7q5y:M, 7q5y:S
48 1i7h:A 109 62 0.1856 0.1651 0.2903 0.17 1i7h:B, 1i7h:C
49 7awt:G 907 76 0.2474 0.0265 0.3158 0.19 7nyr:G, 7nyu:G, 7nyv:G, 7nz1:G, 7p61:G, 7p62:G, 7p63:G, 7p64:G, 7p69:G, 7p7c:G, 7p7e:G, 7p7j:G, 7p7k:G, 7p7l:G, 7p7m:G, 7z7r:G, 7z7s:G, 7z7t:G, 7z7v:G, 7z80:G, 7z83:G, 7z84:G, 7zc5:G, 7zci:G
50 6x89:S1 688 38 0.1340 0.0189 0.3421 0.69 8e73:S1
51 3kl9:A 340 34 0.1443 0.0412 0.4118 0.85 3kl9:B, 3kl9:C, 3kl9:D, 3kl9:E, 3kl9:F, 3kl9:G, 3kl9:H, 3kl9:I, 3kl9:J, 3kl9:K, 3kl9:L
52 1l5p:A 93 61 0.1959 0.2043 0.3115 0.94 1l5p:B, 1l5p:C
53 7d6v:B 239 43 0.1237 0.0502 0.2791 1.1 7d6x:B
54 7a23:C 693 38 0.1443 0.0202 0.3684 1.3 7a24:C, 7aqr:G, 7ar7:G, 7ar8:G, 7arb:G, 8bed:G, 8bpx:G, 8bq5:G, 8bq6:G
55 8qby:G 666 45 0.1546 0.0225 0.3333 1.3
56 8oh5:C 1172 40 0.1546 0.0128 0.3750 1.9 8oh5:F, 8oh5:I, 8oh5:L, 8oh9:C, 8oh9:F, 8oh9:I, 8oh9:L
57 3jd8:A 1133 28 0.0825 0.0071 0.2857 1.9
58 6uox:A 1161 28 0.0825 0.0069 0.2857 1.9
59 6w5r:A 1194 28 0.0825 0.0067 0.2857 1.9 3gki:A, 3gkj:A, 6w5s:A, 6w5t:A, 6w5u:A, 6w5v:A
60 7arc:G 682 40 0.1340 0.0191 0.3250 2.8 7ard:G
61 2wlb:A 103 39 0.1753 0.1650 0.4359 4.0 2wlb:B
62 8a5e:A 583 36 0.1443 0.0240 0.3889 4.8 8a5e:D, 7q4v:A, 7q4v:E, 7q4w:A, 7q4w:E
63 5ifp:A 968 67 0.2165 0.0217 0.3134 5.0 5ift:A, 5ihr:A, 5juv:A, 5mgc:A, 5mgd:A
64 8e9h:G 782 38 0.1443 0.0179 0.3684 5.9 8e9g:G, 8e9i:G
65 4cvq:A 404 51 0.1649 0.0396 0.3137 7.9 4cvq:B
66 6tvk:AAA 660 69 0.1959 0.0288 0.2754 9.1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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