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BioLiP
>protein
ARTFDWMKVLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRERE

The query sequence (length=68) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1b72:A 68 68 1.0000 1.0000 1.0000 4.59e-44
2 2r5z:A 75 68 0.5882 0.5333 0.5882 1.51e-21 9ant:A, 9ant:B, 5jlw:A, 5jlw:D, 5jlx:A, 5jlx:D, 2r5y:A, 4xic:A, 4xic:D, 4xid:A, 4xid:D
3 8eml:A 58 55 0.5441 0.6379 0.6727 9.94e-20 8eml:B
4 2h1k:B 60 56 0.5588 0.6333 0.6786 1.06e-19 2h1k:A
5 1ahd:P 68 54 0.5294 0.5294 0.6667 3.58e-19
6 2me6:A 71 54 0.5147 0.4930 0.6481 9.69e-18
7 4cyc:A 66 61 0.5294 0.5455 0.5902 1.03e-17 1b8i:A
8 4uus:A 67 54 0.5000 0.5075 0.6296 3.89e-17 4uus:E
9 1puf:A 77 54 0.5147 0.4545 0.6481 7.76e-17 2lp0:A
10 1jgg:A 57 54 0.4706 0.5614 0.5926 9.02e-17 1jgg:B
11 6es3:K 72 54 0.4559 0.4306 0.5741 2.52e-16 6es2:K, 6es2:L, 6es3:M, 5lty:K, 5lty:M, 5lux:K, 5lux:L, 7q3o:K, 7q3o:C, 7q3o:E, 7q3o:G, 7q4n:K, 7q4n:C
12 5zjr:A 64 60 0.4853 0.5156 0.5500 8.21e-16 5zjq:A, 5zjs:A, 5zjt:A, 5zjt:E
13 1ig7:A 58 54 0.4706 0.5517 0.5926 1.60e-15
14 3a01:A 78 60 0.4559 0.3974 0.5167 1.01e-13 3a01:E
15 2ld5:A 67 54 0.4118 0.4179 0.5185 4.44e-13
16 8pna:A 67 54 0.4118 0.4179 0.5185 7.51e-13 8pm5:A, 8pm5:D, 8pm5:G, 8pm5:M, 8pm5:J, 8pm7:A, 8pm7:C, 8pm7:E, 8pm7:G, 8pmc:A, 8pmc:C, 8pmc:E, 8pmc:G, 8pmf:A, 8pmn:A, 8pmv:A, 8pmv:D, 8pmv:G, 8pmv:J, 8pn4:A, 8pn4:D, 8pn4:G, 8pn4:M, 8pn4:J, 8pnc:A, 8pnc:K, 8pnc:E, 8pnc:H
17 4rdu:D 62 54 0.3971 0.4355 0.5000 1.36e-12 4rdu:A, 4xrs:I, 4xrs:G
18 5eea:G 63 54 0.3676 0.3968 0.4630 2.35e-12 8byx:B, 8byx:J, 8byx:A, 8byx:K, 8byx:G, 8byx:L, 5edn:A, 5edn:B, 5edn:G, 5edn:J, 5eea:B, 5eea:A, 5eea:J, 5ef6:A, 5ef6:J, 5ef6:B, 5ef6:G, 5eg0:B, 5ego:B, 5no6:A, 5no6:B, 7psx:A, 7psx:B, 7psx:G, 7psx:J
19 1zq3:P 68 53 0.3676 0.3676 0.4717 6.50e-12
20 3rkq:A 58 53 0.3971 0.4655 0.5094 8.23e-12 3rkq:B
21 6m3d:C 108 54 0.3824 0.2407 0.4815 9.11e-12 1du0:A, 1du0:B, 1hdd:C, 1hdd:D, 2hdd:A, 2hdd:B, 3hdd:A, 3hdd:B, 2hos:A, 2hos:B, 2hot:A, 2hot:B
22 6m3d:C 108 48 0.3382 0.2130 0.4792 6.76e-11 1du0:A, 1du0:B, 1hdd:C, 1hdd:D, 2hdd:A, 2hdd:B, 3hdd:A, 3hdd:B, 2hos:A, 2hos:B, 2hot:A, 2hot:B
23 2lkx:A 68 56 0.4118 0.4118 0.5000 1.06e-11
24 8osb:E 62 57 0.4118 0.4516 0.4912 1.62e-10
25 5flv:M 229 52 0.3824 0.1135 0.5000 2.51e-10 5flv:A, 5flv:E, 5flv:I, 4s0h:A, 4s0h:B, 4s0h:E, 4s0h:F, 6wc2:N, 6wc2:M, 6wc2:O, 6wc5:I, 6wc5:N, 2x6u:A, 2x6v:A, 2x6v:B
26 4qtr:C 57 54 0.3676 0.4386 0.4630 5.38e-10 4qtr:A, 4qtr:B, 4qtr:D
27 1nk2:P 77 58 0.3971 0.3506 0.4655 8.59e-10 1nk3:P
28 3a01:F 61 57 0.3824 0.4262 0.4561 1.16e-09 3a01:B, 3lnq:A
29 4rbo:A 55 53 0.3529 0.4364 0.4528 4.27e-08 4rbo:D
30 1fjl:A 65 54 0.3235 0.3385 0.4074 1.73e-07 1fjl:B, 1fjl:C
31 8ejo:A 56 52 0.2794 0.3393 0.3654 2.86e-07 8ejo:B, 8ejp:A, 8ejp:B
32 3cmy:A 60 54 0.3382 0.3833 0.4259 3.08e-07
33 9b8u:B 66 47 0.2941 0.3030 0.4255 1.41e-05 9b8u:A, 9b8u:C, 9b8u:D
34 6e8c:A 135 53 0.2794 0.1407 0.3585 1.61e-04 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
35 6e8c:A 135 54 0.2794 0.1407 0.3519 3.40e-04 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
36 5hod:A 61 54 0.2647 0.2951 0.3333 1.80e-04 5hod:D
37 8ik5:C 67 54 0.2941 0.2985 0.3704 0.002 8ike:C, 8ilw:C
38 4egc:A 539 45 0.2353 0.0297 0.3556 0.010
39 1lfu:P 82 58 0.2941 0.2439 0.3448 0.011 1b72:B, 1b8i:B, 4cyc:B, 1puf:B, 2r5y:B, 2r5z:B, 4uus:B, 4uus:F, 5zjq:B, 5zjr:B, 5zjs:B, 5zjt:B
40 1le8:A 53 42 0.2059 0.2642 0.3333 0.021 1akh:A, 1yrn:A
41 1gt0:C 137 54 0.2647 0.1314 0.3333 0.036 1cqt:A, 1cqt:B, 1e3o:C, 1hf0:A, 1hf0:B, 1o4x:A, 1oct:C
42 3d1n:I 150 49 0.2353 0.1067 0.3265 0.050 3d1n:K, 3d1n:J, 3d1n:L, 3d1n:M, 3d1n:N, 3d1n:O, 3d1n:P
43 7xrc:C 134 42 0.2206 0.1119 0.3571 0.20 2xsd:C
44 8asd:A 1826 40 0.1912 0.0071 0.3250 0.60
45 8r6y:A 1991 40 0.1912 0.0065 0.3250 0.62 8as7:A, 8r6w:A, 6xya:B
46 8asb:A 1715 40 0.1912 0.0076 0.3250 0.64 8as6:A, 8asg:A, 8r6u:A
47 3l1p:A 147 54 0.2794 0.1293 0.3519 0.68 8bx2:A, 6ht5:E, 3l1p:B, 8sps:L, 8spu:L, 6t90:K, 7u0g:M, 7u0g:L, 7u0i:L, 7u0i:M
48 7alp:U 1935 40 0.1912 0.0067 0.3250 0.83
49 5wc9:A 136 54 0.2353 0.1176 0.2963 1.1 1au7:A, 1au7:B, 5wc9:B, 5wc9:E, 5wc9:F
50 8bx1:A 127 43 0.2353 0.1260 0.3721 1.3
51 7ao7:E 402 20 0.1471 0.0249 0.5000 1.4 7ant:A, 7ant:B, 7ao7:A, 7ao7:B, 7ao7:C, 7ao7:D, 7ao7:F
52 8g8e:X 140 25 0.1765 0.0857 0.4800 1.7 8g87:X, 8g88:X, 8g8b:X, 8g8g:X, 8sps:M, 7u0g:K
53 7abi:P 237 27 0.1618 0.0464 0.4074 2.0 7aav:P, 7abg:P
54 8ch6:U 295 27 0.1618 0.0373 0.4074 3.5 7a5p:P, 8c6j:M, 6ff4:P, 6ff7:P, 9fmd:O, 8i0p:O, 8i0r:O, 8i0s:O, 8i0t:O, 8i0u:O, 8i0v:O, 8i0w:O, 6icz:O, 6id0:O, 6id1:O, 5mqf:P, 6qdv:M, 7qtt:U, 8ro2:O, 7w59:O, 7w5a:O, 7w5b:O, 5xjc:O, 5yzg:O, 5z56:O, 5z57:O, 6zym:P
55 8cls:A 837 36 0.2206 0.0179 0.4167 4.2
56 7w1e:E 644 24 0.1618 0.0171 0.4583 4.3 7w1e:A, 7w1e:C, 7w1e:D, 7w1e:F, 7w1e:B
57 8k7n:A 307 12 0.1029 0.0228 0.5833 5.6
58 1xvx:A 311 13 0.1029 0.0225 0.5385 6.2
59 4j19:A 77 69 0.3382 0.2987 0.3333 7.3 4j19:B
60 8w53:B 479 32 0.1618 0.0230 0.3438 9.2 8w53:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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