BioLiP

>protein
AMATLLEKTRQVNELLQKNNLFDVQAELPYNKMAMILGDILESNAYIISSSGDLLGYTEKLDVNNARIKNMFKEKKFPQG
YTEAVDMLKVTEANIPIDSDLTAFPFESRELYPFGLTTIVPLYGAGKRLGTIILARVEKSFNEDDLVLAEYSATVVGMQI
LYHQSRTIEAEVRSATAVQMAINTLSYSELKAVHAIFEALDGEEGRLTASSIADEIGITRSVIVNALRKLESAGIIESRS
LGMKGTYLKVLNQQFIKELEK

The query sequence (length=261) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8c7u:D	262	261	1.0000	0.9962	1.0000	0.0	8c7u:A, 8c7u:B, 8c7u:C
2	5loe:A	258	257	0.5479	0.5543	0.5564	1.13e-92	2b18:A, 2gx5:C, 2hgv:A, 5loe:B, 5loe:C, 5loe:D
3	8c7s:A	256	258	0.5057	0.5156	0.5116	6.64e-85	8c7s:B, 5ey0:B, 5ey0:A, 5ey1:A, 5ey1:B
4	5n0l:A	156	162	0.2490	0.4167	0.4012	2.55e-31	5n0l:B, 5n0l:C, 5n0l:D, 5n0l:E, 5n0l:F
5	2p5v:G	158	52	0.0613	0.1013	0.3077	0.57	2p5v:A, 2p5v:B, 2p5v:C, 2p5v:E, 2p5v:D, 2p5v:F, 2p5v:H, 2p6s:A, 2p6s:G, 2p6s:B, 2p6s:D, 2p6s:C, 2p6s:F, 2p6s:E, 2p6s:H, 2p6t:A, 2p6t:G, 2p6t:B, 2p6t:D, 2p6t:C, 2p6t:F, 2p6t:E, 2p6t:H
6	4bed:A	1664	45	0.0536	0.0084	0.3111	1.4	4bed:C
7	2vbw:A	147	34	0.0460	0.0816	0.3529	1.9	2vbx:A, 2vby:A, 2vbz:A, 2vc0:A, 2vc1:A, 2w24:A
8	8ova:Bc	144	134	0.1264	0.2292	0.2463	5.3	8ove:Bc, 4v8m:Bc
9	1wyu:B	473	64	0.0881	0.0486	0.3594	5.8	1wyu:D, 1wyu:F, 1wyu:H, 1wyv:B, 1wyv:D, 1wyv:F, 1wyv:H
10	7ajt:UN	147	24	0.0421	0.0748	0.4583	8.1	6zqa:UN, 6zqb:UN, 6zqc:UN
11	1isq:A	240	34	0.0460	0.0500	0.3529	8.5

[Back]