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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
AKEKDTIRTEGVVTEALPNATFRVKLDSGPEILAYISGKMRMHYIRILPGDRVVVEITPYDPTRGRIVYRK

The query sequence (length=71) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1hr0:W 71 71 1.0000 1.0000 1.0000 4.49e-47 5lmn:W, 5lmo:W, 5lmp:W, 5lmq:W, 5lmr:W, 5lms:W, 5lmt:W, 5lmv:W, 5me0:V, 5me1:V, 6o7k:5
2 4ql5:B 66 64 0.5493 0.5909 0.6094 1.96e-23
3 1u0l:A 278 68 0.2958 0.0755 0.3088 0.027 1u0l:B, 1u0l:C
4 7ooc:K 136 50 0.2535 0.1324 0.3600 0.076 7p6z:K, 7pah:K, 7pai:K, 7paj:K, 7pak:K, 7pal:K, 7pam:K, 7pan:K, 7pao:K, 7paq:K, 7par:K, 7pas:K, 7ph9:K, 7pha:K, 7phb:K, 7phc:K, 7pi8:K, 7pi9:K, 7pia:K, 7pib:K, 7pic:K, 7pio:K, 7pip:K, 7piq:K, 7pir:K, 7pis:K, 7pit:K
5 8uu6:l 135 50 0.2394 0.1259 0.3400 0.24 7nhn:m, 8uu4:l, 8uu5:l, 8uu7:l, 8uu8:l, 8uu9:l
6 3j9w:AL 137 50 0.2394 0.1241 0.3400 0.39 8buu:l, 8cdu:L, 8cdv:L, 8cec:L, 8ced:L, 8cee:L, 6ha1:l, 6ha8:l, 6htq:l, 5njt:L, 7o5b:L, 8qcq:l, 7qgu:q, 7qh4:p, 8qpp:L, 7qv1:l, 7qv2:l, 7qv3:l, 8r55:L
7 4v61:AL 123 48 0.2535 0.1463 0.3750 0.42 6eri:BL, 5mmj:l, 5mmm:l, 5x8p:l, 5x8r:l
8 8fmw:L 124 48 0.2394 0.1371 0.3542 0.60
9 7yta:B 140 43 0.1972 0.1000 0.3256 0.77 7yta:A, 7yta:C
10 2qw5:A 327 28 0.1549 0.0336 0.3929 0.81 2qw5:B
11 8baq:A 208 45 0.1972 0.0673 0.3111 0.87 8bar:A, 8bas:A
12 7m4u:l 122 43 0.2113 0.1230 0.3488 1.7 7m4w:l, 7m4x:l, 7m4y:l, 7m4z:l, 8rd8:L6, 8rdv:L6, 8rdw:L6, 7ryf:l, 7ryg:l, 7ryh:l, 7uvv:l, 7uvw:l, 7uvx:l, 7uvy:l, 7uvz:l, 7uw1:l, 6v39:l, 6v3a:l, 6v3b:l, 6v3e:l, 6ypu:m, 6yt9:m
13 7jil:q 121 43 0.2254 0.1322 0.3721 1.8
14 6hiv:DB 1111 36 0.2113 0.0135 0.4167 2.7 6hiw:DB, 6hiz:DB, 7pua:DB
15 3p2a:A 145 61 0.2958 0.1448 0.3443 3.0 3p2a:B, 3p2a:C, 3p2a:D
16 7y6t:C 1098 18 0.1127 0.0073 0.4444 3.8
17 7y6t:A 1124 18 0.1127 0.0071 0.4444 3.8
18 7w6m:A 1224 18 0.1127 0.0065 0.4444 3.8 7w6m:C, 7w6m:B, 7w73:C, 7w73:A, 7y6t:B, 7y6u:A
19 6ie4:A 137 34 0.1690 0.0876 0.3529 4.1 6ie4:C, 6ie7:A, 6ie7:B, 6ie7:C, 6ie7:D
20 4a2i:L 123 43 0.1972 0.1138 0.3256 4.5 8a3l:L, 7abz:q, 7ac7:q, 7acj:q, 7acr:q, 4adv:L, 5afi:l, 7afi:L, 7afl:L, 7afo:L, 8akn:M, 8am9:M, 6awb:O, 6awc:O, 6awd:O, 9ax7:L, 9ax8:l, 8aye:L, 8b0x:L, 7b5k:l, 8b7y:q, 8bf7:p, 8bge:p, 8bgh:p, 8bh4:p, 8bhj:p, 8bhl:p, 8bhn:p, 8bhp:p, 8bil:p, 8bim:p, 7bod:L, 7boe:L, 7bof:L, 7bog:L, 7boh:L, 7boi:L, 6bu8:L, 6by1:AL, 6by1:BL, 6c4i:l, 8cai:L, 8cep:L, 8cgj:L, 8cgr:L, 8cgu:L, 9cg5:L, 9cg6:L, 9cg7:L, 7cpj:l, 7d6z:s, 7d80:M, 6dnc:YA, 8eiu:L, 8ekc:l, 8emm:L, 6enf:l, 6enj:l, 6enu:l, 8eyq:L, 8eyt:L, 9fbv:L, 8fiz:AC, 8fto:L, 8fzd:l, 8fze:l, 8fzf:l, 8fzg:l, 8fzh:l, 8fzi:l, 8fzj:l, 8g2u:k, 8g31:k, 8g34:k, 8g38:k, 8g6w:L, 8g7p:l, 8g7q:l, 8g7r:l, 8g7s:l, 8ghu:l, 6gwt:l, 6gxm:l, 6gxn:l, 6gxo:l, 6gxp:l, 6h4n:l, 5h5u:s, 6h58:l, 6h58:ll, 6hrm:q, 8hsp:L, 8htz:L, 8hu1:L, 6i7v:AL, 6i7v:BL, 8ifb:L, 8ifc:L, 5iqr:q, 5it8:AL, 5it8:BL, 3iy8:L, 3j0d:I, 5j5b:AL, 5j5b:BL, 5j7l:AL, 5j7l:BL, 5j88:AL, 5j88:BL, 5j8a:AL, 5j8a:BL, 3j9y:l, 3j9z:SL, 5j91:AL, 5j91:BL, 3ja1:SL, 3jbu:L, 3jbv:L, 3jcd:l, 3jce:l, 3jcj:t, 3jcn:o, 5jc9:AL, 5jc9:BL, 7jss:Q, 7jsw:Q, 7jsz:Q, 8jsg:t, 8jsh:t, 5jte:AL, 7jt1:Q, 7jt2:Q, 7jt3:Q, 5ju8:AL, 7k00:L, 8k3o:L, 8k4e:L, 7k50:Q, 7k51:Q, 7k52:Q, 7k53:Q, 7k54:Q, 7k55:Q, 5kcr:1l, 5kcs:1l, 5kps:17, 5kpv:16, 5kpw:16, 5kpx:16, 5l3p:l, 6lkq:K, 7lv0:Q, 5lza:l, 5lzb:l, 5lzc:l, 5lzd:l, 5lze:l, 5lzf:l, 7m5d:q, 5mdv:q, 5mdw:q, 5mdy:q, 5mdz:q, 5me0:L, 5me1:L, 5mgp:l, 5my1:L, 7n1p:SL, 7n2c:SL, 7n2u:SL, 7n2v:SL, 7n30:SL, 7n31:SL, 7nar:L, 7nas:L, 7nat:L, 7nau:L, 7nav:L, 7nax:L, 7nbu:L, 5np6:O, 6nqb:L, 7nso:l, 7nsp:l, 7nsq:l, 5nwy:B, 7nwt:q, 7nww:p, 7o19:AL, 7o1a:AL, 7o1c:AL, 5o2r:l, 7o5h:L, 6o7k:t, 6o9j:l, 6o9k:l, 7oe0:L, 7oe1:L, 6ofx:Q, 6og7:Q, 6ogf:Q, 6ogg:Q, 6ogi:Q, 7oi0:L, 7oif:p, 7oig:p, 7oii:p, 7oiz:L, 7oj0:L, 6om6:q, 6ore:q, 6orl:q, 6osk:q, 6osq:q, 6ost:q, 6ot3:q, 7ot5:p, 7otc:l, 6ouo:q, 8p16:q, 8p17:q, 8p18:q, 7p3k:L, 8peg:L, 8phj:L, 7pjs:l, 7pjt:l, 7pju:l, 7pjv:l, 7pjw:l, 7pjx:l, 7pjy:l, 7pjz:l, 8pkl:L, 8pva:L, 7q4k:AL, 8q4f:L, 6q97:q, 6q98:q, 6q9a:q, 8qbt:t, 7qg8:E, 7qgh:B, 7qgn:E, 7qgr:B, 8qk7:q, 8qoa:L, 8r3v:L1, 8r3v:L2, 8r6c:L, 8r8m:L, 8rcl:L1, 8rcl:L2, 8rcm:L1, 8rcm:L2, 8rcs:L1, 8rcs:L2, 8rct:L1, 8rct:L2, 7s1g:t, 7s1h:t, 7s1i:t, 7s1j:t, 7s1k:t, 7sa4:q, 6spc:l, 7ss9:Q, 7ssd:Q, 7ssl:Q, 7ssn:Q, 7sso:Q, 7ssw:Q, 7st2:Q, 7st6:Q, 7st7:Q, 8syl:l, 6szs:l, 8t5d:k, 8t5h:k, 6tbv:S121, 6tc3:S121, 7tos:S12, 4u1u:AL, 4u1u:CL, 4u1v:AL, 4u1v:CL, 4u20:AL, 4u20:CL, 4u24:AL, 4u24:CL, 4u25:AL, 4u25:CL, 4u26:AL, 4u26:CL, 4u27:AL, 4u27:CL, 5u4i:l, 5u4j:l, 5u9f:L, 5u9g:L, 7ug7:SL, 7uph:g, 8upo:R, 8upr:R, 8uql:R, 8uqm:R, 8uqp:R, 8ur0:R, 8urh:R, 8uri:R, 8urx:R, 8ury:R, 5uyk:L, 5uyl:L, 5uym:L, 5uyn:L, 5uyp:L, 5uyq:L, 5uz4:L, 4v4h:AL, 4v4h:CL, 4v4q:AL, 4v4q:CL, 4v4v:AL, 4v4w:AL, 4v50:AL, 4v50:CL, 4v52:AL, 4v52:CL, 4v53:AL, 4v53:CL, 4v54:AL, 4v54:CL, 4v55:AL, 4v55:CL, 4v56:AL, 4v56:CL, 4v57:AL, 4v57:CL, 4v5b:BL, 4v5b:DL, 4v5h:AL, 4v5y:AL, 4v5y:CL, 4v64:AL, 4v64:CL, 4v65:AD, 4v66:AD, 4v69:AL, 4v6c:AL, 4v6c:CL, 4v6d:AL, 4v6d:CL, 4v6e:AL, 4v6e:CL, 4v6k:BP, 4v6l:AP, 4v6m:AL, 4v6n:BO, 4v6o:AO, 4v6p:AO, 4v6q:AO, 4v6r:AO, 4v6s:BN, 4v6t:AL, 4v6v:AL, 4v6y:AL, 4v6z:AL, 4v70:AL, 4v71:AL, 4v72:AL, 4v73:AL, 4v74:AL, 4v75:AL, 4v76:AL, 4v77:AL, 4v78:AL, 4v79:AL, 4v7a:AL, 4v7b:AL, 4v7c:AL, 4v7d:BL, 4v7i:BL, 4v7s:AL, 4v7s:CL, 4v7t:AL, 4v7t:CL, 4v7u:AL, 4v7u:CL, 4v7v:AL, 4v7v:CL, 4v85:AL, 4v89:AL, 4v9c:AL, 4v9c:CL, 4v9d:AL, 4v9d:BL, 4v9o:BL, 4v9o:DL, 4v9o:FL, 4v9o:HL, 4v9p:BL, 4v9p:DL, 4v9p:FL, 4v9p:HL, 8vs9:S12, 8vsa:S12, 6vu3:R, 6vwl:k, 6vwm:k, 6vwn:k, 6vyq:R, 6vyr:R, 6vys:R, 6vyt:R, 6vyu:R, 6vyw:R, 6vyx:R, 6vyy:R, 6vyz:R, 6vz2:R, 6vz3:R, 6vz5:R, 6vz7:R, 6vzj:R, 6w6k:L, 6w77:L, 6w7m:L, 6w7n:L, 6w7w:K, 5wdt:l, 6wd0:Q, 6wd1:Q, 6wd2:Q, 6wd3:Q, 6wd4:Q, 6wd5:Q, 6wd6:Q, 6wd7:Q, 6wd8:Q, 6wd9:Q, 6wda:Q, 6wdb:Q, 6wdc:Q, 6wdd:Q, 6wde:Q, 6wdf:Q, 6wdg:Q, 6wdh:Q, 6wdi:Q, 6wdj:Q, 6wdk:Q, 6wdl:Q, 6wdm:Q, 5we4:l, 5we6:l, 4wf1:AL, 4wf1:CL, 5wf0:l, 5wfk:l, 5wfs:l, 6wnv:Q, 6wnw:Q, 4woi:AL, 4woi:DL, 4www:QL, 4www:XL, 6x6t:R, 6x7f:R, 6x7k:R, 6x9q:R, 6xdq:R, 6xdr:R, 6xe0:K, 6xgf:R, 6xii:R, 6xij:R, 6xza:L1, 6xzb:L1, 6y69:l, 7y7c:L, 7y7d:L, 7y7e:L, 7y7f:L, 7y7g:L, 7y7h:L, 4ybb:AL, 4ybb:BL, 2ykr:L, 6ysr:l, 6yss:l, 6yst:l, 6ysu:l, 6ztj:AL, 6ztl:AL, 6ztm:AL, 6ztn:AL, 6zto:AL, 6ztp:AL, 7zta:S121, 6zu1:AL
21 6zhh:A 883 29 0.1268 0.0102 0.3103 5.2 6zhf:A, 6zhg:A, 6zhh:B, 6zhh:C, 6zhh:D, 6zhh:E, 6zhh:F, 6zhh:G, 6zhh:H
22 7unr:l 122 47 0.2113 0.1230 0.3191 5.5 8cd1:l, 6spe:l, 6spf:l, 6spg:l, 7unu:l, 7unv:l, 7unw:l
23 5v93:l 123 43 0.2254 0.1301 0.3721 5.7 8crx:L, 8cwo:L, 6dzi:u, 6dzk:L, 8fr8:n, 7kgb:l, 7msc:l, 7msh:l, 7msm:l, 7msz:l, 7mt2:l, 7mt3:l, 7mt7:l, 5o5j:L, 5o61:BL, 7sfr:l, 8v9j:l, 8v9k:l, 8v9l:l, 8whx:m, 8wi7:m, 8wi9:m, 8wib:m, 8wid:m, 8wif:m, 5xyu:L, 5zeb:l, 5zep:l, 5zeu:l
24 6qrz:A 274 73 0.2394 0.0620 0.2329 7.8
25 3dxa:E 244 35 0.1690 0.0492 0.3429 9.9 3dxa:J, 3dxa:O, 7n1f:E, 7ndq:EEE, 7ndu:EEE, 7nme:E, 7nmf:E, 7nmg:E, 7pbe:E, 7pbe:J, 8qfy:JJJ, 6rsy:E, 6rsy:J, 7rtr:E, 3vxr:E, 3vxs:E

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417