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BioLiP
>protein
ADDPNYFIGIKFRHIPYEYDVKIPHLTFGVLFISDNMIPDVVEIMKIMKKELFEMDITTSYTYMLSDGIYVANVSGVLAT
YFKMYNLFYKSQITFGQSRMFIPHITLSFSNNKTVRIESTRLKISSIYLRKIKGDTVFDMSE

The query sequence (length=142) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4ye2:A 142 142 1.0000 1.0000 1.0000 2.57e-102
2 6o3v:B 831 142 0.8732 0.1492 0.8732 7.51e-84 6o3v:A, 6o3v:C, 6o6b:A, 6o6b:B, 6o6b:C, 6o6b:D
3 2w5b:A 271 36 0.0915 0.0480 0.3611 3.7 4a4x:A, 4afe:A, 2jav:A, 5m51:A, 5m53:A, 5m57:A, 6sgi:A, 2w5a:A, 2xk4:A, 2xkd:A, 2xkf:A, 2xnm:A, 2xnn:A, 2xnp:A
4 2xno:A 251 36 0.0915 0.0518 0.3611 3.7 5m55:A, 6sgd:A, 6sgh:A, 6sgk:A, 6sk9:A, 2wqo:A, 2xk3:A, 2xk6:A, 2xk7:A, 2xk8:A, 2xkc:A, 2xke:A
5 6nys:B 679 43 0.1056 0.0221 0.3488 4.5 6nys:A
6 4edn:A 127 66 0.1197 0.1339 0.2576 7.5 4edn:B, 4edn:C, 4edn:D, 4edn:E, 4edn:F, 4edn:G
7 8rwk:A 495 88 0.1479 0.0424 0.2386 8.5 8rwk:B, 8rwk:C, 8rwk:D
8 2vfk:A 205 42 0.0986 0.0683 0.3333 8.5 2vfl:A
9 7p63:C 589 56 0.0915 0.0221 0.2321 10.0 7nyr:D, 7nyu:D, 7nz1:D, 7p64:C, 7p69:C, 7p7c:C, 7p7j:C, 7p7l:C, 7p7m:C, 7z7r:C, 7z7s:C, 7z7t:C, 7z7v:C, 7z80:C, 7z83:C, 7z84:C, 7zc5:C, 7zci:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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